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The map label for this gene is yapF

Identifier: 218927800

GI number: 218927800

Start: 661725

End: 664010

Strand: Reverse

Name: yapF

Synonym: YPO0606

Alternate gene names: NA

Gene position: 664010-661725 (Counterclockwise)

Preceding gene: 218927801

Following gene: 218927794

Centisome position: 14.27

GC content: 54.72

Gene sequence:

>2286_bases
ATGAATAACCATAAGATCTGGCGTTTATCCGCCGTTGCTGTTGCTTTACTGATTAGCGGTAATAGCTATGCCGATCAGAC
CCTCCACTTCGCTCAGCAACCGCATAACACGGGCGATCATACTGTGATCGCCGCACCAGAGGTCAATAACTTTTCATTGG
CAGATCTGACCGCCAACGCAGAAGGGCAAGCAGTGGATGCGACCAACGCAGGCGCACTGTCGCTGCGGGTTGAACCCACT
CAAGGTGACGCTCAGGCGAATGGCGTACTGGTCACCTCCGGCACCTTTACTAATCAGGCTCAGGGCTCGATCACCGTGAG
TGCCAGCAGTCAGGATCAACATGCTGTTGCCAGCGGGTTGCAGGCAACGGATGCCTATTGGTCCACTCTGCGTAATCAGG
GTAGCATCCGTGCCACGAGCAACAGCCTACACGGCAGTGCAGAGGTCTATGGTATCCAGGCTGGCCTGGCCTTTTCCGAT
GCCGCCGGGGATCACTACGGTGACCACATGATGTTGAGCAACGAGGGTGTGATGCAGGTGAGTGCCACGGCCGAGCAGGA
CGCCTTTGCCAGCGGTATCTATACCAATGCCGGTAATGGCGTGGTCAACAATGGCCGTCTGGATGTCAGTGCTCATGCCA
GTGCTGGCGATGCACGGGCAACCGGCCTGCATACCCTCTCTGCCAACCCAGGCGTCGATCCCGATCCATGGAACCCCGCT
AACCCCACTCATCTGATGAGCAACAATGGCTCGTTGTCAGTCACGGCCAGCGGTAACAATGCGACCGCAAGCGCGATCAG
TACCGAGGGCGAAGGGGTCTACATCTACAACAACGGGACACTGATCGTTGATGCATTTAGCGAGAGTGCGCAGGGCGGTG
CATCCGCCTATGGTATTCATGTGCTCAACGGCAGTGCCACGATCAACTCCAGCGGCAGAATTTTGGCGACAGCCACCGGC
GGAAGCCAACAGCAAGCCTATGAAGTGATGGCCGACGGTTCGGTAGTTAATATTGAACGCTATACACTCGCCTTGGGCAA
TGAGACACCGTGGGCGGTCAGTAATGGCGGTTCGATCGTGCTGGGTAACGGTACGCAAGGGGCCGATCTGGTGCTGATGG
CTGGGCAGGCCAGTGAAGGTTTCGCCTATGGTAAAGAGTACAGCTTGGACAATCTGGCTTACGATACCACCTCCGGCCAG
CAGAGTACGGTGGGGGGTTCTATTGCGGGGTTGTACGGTATTACGCCTGATATCAAGGTGATTCACAGCGGTAGCAGCAG
TAGTTCGTTGGGATCTGCTGCACTGGTGTATGCACCGGATGTCTCTCATGCCGGAGTCTCCGCATTGGCACAGCGTTCTT
CCATGGAGCAGGCATCCAATATCATCTCCTCGCAACTGCATAGTCAGCTGGTAAGTAACGCCGGTTGTAACCAGAAGTTG
GAGAGTGCCGATAGCTGCGTCTTTATCACACCTTATGCTGGTGAGTACCGTCGTGATCCAGTGACCTCCGGTTACAGCGG
TCAGCGCTATGGGGTATTGCTCGGTCAGAACCAACATTTTGGCGATTTCCAGCTTGGCTGGCACGGCGGTTATGAGAGTG
CCAGCACCGATTTTAATGGTACCTCTGTAGGGCGTAAGGAGGAGATTAATACGCTGATGCTGGGGGTTCAGGGCGGAATG
AAGCTCTCTGAGAGTCTGTTTATTGCAGCGACCAGTACGTGGTTCAGCAGTGACACCGATTACAGTGACAGCAATACCTA
CTACGGCGTGGGCAGCCAGAGCGGCAGCTATGATAGCAGTGGCCTCTACACCGATGTCTCCGTGGGTAATAGCTGGCAGT
TGAATCGCAACTATGCCATGACACCGATGGTCGGGCTGACGCATATCTGGCAGCAACGCGATGGCTATACTGTCTCATCC
AATAACAAAAACTATGATCTTATCGACACCCGCTATAGCAGCTACAGCGACCATGCAGTCGCTCTCCATGCTGGAGTACG
TCTCGATGGTCGCTATCCACTGACCAACGAGACACTGCTTAAGCCGTTCTTTAATGTCGGATTCCAGCAAATGTTGTATG
GCGATGAGATCACCATCGATCAGAGTATCCCTAATTCGCCGGTAGTTGGCGTAAGCACCAAGGATAAAACCACTCAAGGA
ACCTTCGATCTGGGGATGGCACTGGTAAGCGATAACGGTGTGTCTGCCAGCCTACAGCTATCGGGCATGGTCAATAGTGA
TCGTCAGGATTTCACCGGCTGGGCAAATCTGGGCTGGGCGTTCTAG

Upstream 100 bases:

>100_bases
AAGATATTTTCGCCAAAGTCGGCTTTATCCTTAATTTCTAAGCGTCCACATCCTTTTACTAACGATAAAAAATATTGGGC
TAATATTTAGGGAATGACCT

Downstream 100 bases:

>100_bases
AGGGGCAGTTGCGTTAAGATGCTGTCGTATAACATGCAGTTCAGCATCTTAGGCCGCTGACAGCATTCCTACCGCTGTAC
TCCGAATGCAGCGGCGGGAG

Product: putative autotransporter protein

Products: NA

Alternate protein names: Outer Membrane Autotransporter

Number of amino acids: Translated: 761; Mature: 761

Protein sequence:

>761_residues
MNNHKIWRLSAVAVALLISGNSYADQTLHFAQQPHNTGDHTVIAAPEVNNFSLADLTANAEGQAVDATNAGALSLRVEPT
QGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGLQATDAYWSTLRNQGSIRATSNSLHGSAEVYGIQAGLAFSD
AAGDHYGDHMMLSNEGVMQVSATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA
NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGGASAYGIHVLNGSATINSSGRILATATG
GSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIVLGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQ
QSTVGGSIAGLYGITPDIKVIHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL
ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNGTSVGRKEEINTLMLGVQGGM
KLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSSGLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYTVSS
NNKNYDLIDTRYSSYSDHAVALHAGVRLDGRYPLTNETLLKPFFNVGFQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG
TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF

Sequences:

>Translated_761_residues
MNNHKIWRLSAVAVALLISGNSYADQTLHFAQQPHNTGDHTVIAAPEVNNFSLADLTANAEGQAVDATNAGALSLRVEPT
QGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGLQATDAYWSTLRNQGSIRATSNSLHGSAEVYGIQAGLAFSD
AAGDHYGDHMMLSNEGVMQVSATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA
NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGGASAYGIHVLNGSATINSSGRILATATG
GSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIVLGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQ
QSTVGGSIAGLYGITPDIKVIHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL
ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNGTSVGRKEEINTLMLGVQGGM
KLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSSGLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYTVSS
NNKNYDLIDTRYSSYSDHAVALHAGVRLDGRYPLTNETLLKPFFNVGFQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG
TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF
>Mature_761_residues
MNNHKIWRLSAVAVALLISGNSYADQTLHFAQQPHNTGDHTVIAAPEVNNFSLADLTANAEGQAVDATNAGALSLRVEPT
QGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGLQATDAYWSTLRNQGSIRATSNSLHGSAEVYGIQAGLAFSD
AAGDHYGDHMMLSNEGVMQVSATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA
NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGGASAYGIHVLNGSATINSSGRILATATG
GSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIVLGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQ
QSTVGGSIAGLYGITPDIKVIHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL
ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNGTSVGRKEEINTLMLGVQGGM
KLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSSGLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYTVSS
NNKNYDLIDTRYSSYSDHAVALHAGVRLDGRYPLTNETLLKPFFNVGFQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG
TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79554; Mature: 79554

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNHKIWRLSAVAVALLISGNSYADQTLHFAQQPHNTGDHTVIAAPEVNNFSLADLTANA
CCCCEEEEEHHEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEECCC
EGQAVDATNAGALSLRVEPTQGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGL
CCCEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHCC
QATDAYWSTLRNQGSIRATSNSLHGSAEVYGIQAGLAFSDAAGDHYGDHMMLSNEGVMQV
HHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEECCEEECCCCCCCCCEEEECCCCEEEE
SATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA
ECCCCCCHHHCCEEECCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCC
NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGGASAYGIH
CCCEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCEEEEE
VLNGSATINSSGRILATATGGSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIV
EEECCEEECCCCCEEEEECCCCHHHHHHEEECCCEEEEEEEEEEECCCCCEEEECCCEEE
LGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQQSTVGGSIAGLYGITPDIKV
ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEE
IHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL
EECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNG
HCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC
TSVGRKEEINTLMLGVQGGMKLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSS
CCCCCHHCCEEEEEEECCCCEECCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC
GLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYTVSSNNKNYDLIDTRYSSYSDHAV
CCEEEEECCCEEEECCCEECCCHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCEE
ALHAGVRLDGRYPLTNETLLKPFFNVGFQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG
EEEECEEECCCCCCCCCHHHHHHHHCCHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCC
TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF
CCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNNHKIWRLSAVAVALLISGNSYADQTLHFAQQPHNTGDHTVIAAPEVNNFSLADLTANA
CCCCEEEEEHHEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEECCC
EGQAVDATNAGALSLRVEPTQGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGL
CCCEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHCC
QATDAYWSTLRNQGSIRATSNSLHGSAEVYGIQAGLAFSDAAGDHYGDHMMLSNEGVMQV
HHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEECCEEECCCCCCCCCEEEECCCCEEEE
SATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA
ECCCCCCHHHCCEEECCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCC
NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGGASAYGIH
CCCEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCEEEEE
VLNGSATINSSGRILATATGGSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIV
EEECCEEECCCCCEEEEECCCCHHHHHHEEECCCEEEEEEEEEEECCCCCEEEECCCEEE
LGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQQSTVGGSIAGLYGITPDIKV
ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEE
IHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL
EECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNG
HCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC
TSVGRKEEINTLMLGVQGGMKLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSS
CCCCCHHCCEEEEEEECCCCEECCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC
GLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYTVSSNNKNYDLIDTRYSSYSDHAV
CCEEEEECCCEEEECCCEECCCHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCEE
ALHAGVRLDGRYPLTNETLLKPFFNVGFQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG
EEEECEEECCCCCCCCCHHHHHHHHCCHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCC
TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF
CCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA