| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is sstT [H]
Identifier: 218927781
GI number: 218927781
Start: 628827
End: 630095
Strand: Reverse
Name: sstT [H]
Synonym: YPO0584
Alternate gene names: 218927781
Gene position: 630095-628827 (Counterclockwise)
Preceding gene: 218927782
Following gene: 218927780
Centisome position: 13.54
GC content: 48.54
Gene sequence:
>1269_bases TTGCTAGAAGCTATGGAAAAGACACAGTCTGTATTTATACGATTTATCGTCAACGGTAGTTTAGTGAAACAAATACTGAT CGGTTTAGTTGCCGGTATTGTTTTAGCATTAGTATCGACTCCTGCAGCGATAGCGGTAGGGTTACTCGGTTCGCTGTTCG TGGGCGCATTAAAAGCCGTCGCGCCAGTTTTAGTCTTGATGTTGGTCATAGCATCCATCGCCAACCATAAGAAAGGCCAA AAAACCAGTATTCGCCCTATTCTGTTCCTGTATGTATTAGGGACATTCTCTGCGGCACTGGTTGCGGTTGTCGTCAGTTT TATCTACCCATCAACCCTTATTTTGGTGGCTGAGAGTGCTGATATCACCCCACCGAGTGGGATTGTTGAAGTGCTACACG GTTTGCTAAACAGCATAATCGCCAACCCTATCCATGCGCTGCTCAATGCTAACTACATTGGTATTCTGGCTTGGGCTGTG GGTTTAGGTATTGCCTTGCGTCATGCTGCCGATACCACCAAAGCATTGATTAATGATATGTCAGATGCCGTCACTTTGGT GGTCCGTGTGGTTATCCGTTTTGCACCGTTGGGTATTTTTGGTTTGGTCGCGTCCACTATCGCAGCTACCGGCTTCGGTG CCTTACAGCTTTATGCGCAACTGTTAGTGGTATTGATCGGCTGTATGTTACTGGTGGCATTAGTGGTCAACCCACTGATT GTTTACTGGAAGATTCGCCGTAATCCTTATCCATTGGTATTTGCTTGCCTGCGTGAAAGTGGCGTTACTGCCTTCTTTAC CCGGAGTTCAGCCGCAAACATTCCAGTGAATATGGAAATGTGTAAGAAAATGAACCTGAATGAAGACACCTATTCGATCT CTATTCCGTTAGGTGCCACCATCAATATGGCTGGTGCAGCCATCACCATCACGGTGCTGACACTGGCGGCGGTTCATACC CTAGGCATTACCGTTGACCTGCCAACAGCCCTGCTACTGAGTGTGGTTGCGGCGATCTGTGCCTGTGGTGCATCCGGTGT TGCCGGTGGCTCTCTGTTACTGATCCCACTGGCTTGCAGCATGTTCGGCATTCCAAACGATGTGGCAATGCAAGTGGTTG GTGTTGGCTTCATTATCGGCGTATTGCAGGATTCAGCCGAAACTGCACTGAACTCTTCAACCGATGTGTTGTTTACTGCA GCGGTCTGTCAGGCTGAGGATGCCAAACTGGCTAATCCTGACCCACTGGCAGCGGGTAAGTCAGTCTAA
Upstream 100 bases:
>100_bases TCAGTGATTCAGGTATGGAGAGCAGCTAGCACCGCTGCAACTTCAGGTAATGAAGGGTATAAACGGGCAGAACATATTAA ATTTCACTTGGGAAGAGGCA
Downstream 100 bases:
>100_bases ATACTCGGTTTTACCTACGCAAAATGCCAGTCAGTTAAGTTTGACTGGCATTTTTTTGTGCCCAGAAAACCCCCAGCTAG GCTGGGGGTTCAGTAAAGCT
Product: serine/threonine transporter SstT
Products: NA
Alternate protein names: Na(+)/serine-threonine symporter [H]
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MLEAMEKTQSVFIRFIVNGSLVKQILIGLVAGIVLALVSTPAAIAVGLLGSLFVGALKAVAPVLVLMLVIASIANHKKGQ KTSIRPILFLYVLGTFSAALVAVVVSFIYPSTLILVAESADITPPSGIVEVLHGLLNSIIANPIHALLNANYIGILAWAV GLGIALRHAADTTKALINDMSDAVTLVVRVVIRFAPLGIFGLVASTIAATGFGALQLYAQLLVVLIGCMLLVALVVNPLI VYWKIRRNPYPLVFACLRESGVTAFFTRSSAANIPVNMEMCKKMNLNEDTYSISIPLGATINMAGAAITITVLTLAAVHT LGITVDLPTALLLSVVAAICACGASGVAGGSLLLIPLACSMFGIPNDVAMQVVGVGFIIGVLQDSAETALNSSTDVLFTA AVCQAEDAKLANPDPLAAGKSV
Sequences:
>Translated_422_residues MLEAMEKTQSVFIRFIVNGSLVKQILIGLVAGIVLALVSTPAAIAVGLLGSLFVGALKAVAPVLVLMLVIASIANHKKGQ KTSIRPILFLYVLGTFSAALVAVVVSFIYPSTLILVAESADITPPSGIVEVLHGLLNSIIANPIHALLNANYIGILAWAV GLGIALRHAADTTKALINDMSDAVTLVVRVVIRFAPLGIFGLVASTIAATGFGALQLYAQLLVVLIGCMLLVALVVNPLI VYWKIRRNPYPLVFACLRESGVTAFFTRSSAANIPVNMEMCKKMNLNEDTYSISIPLGATINMAGAAITITVLTLAAVHT LGITVDLPTALLLSVVAAICACGASGVAGGSLLLIPLACSMFGIPNDVAMQVVGVGFIIGVLQDSAETALNSSTDVLFTA AVCQAEDAKLANPDPLAAGKSV >Mature_422_residues MLEAMEKTQSVFIRFIVNGSLVKQILIGLVAGIVLALVSTPAAIAVGLLGSLFVGALKAVAPVLVLMLVIASIANHKKGQ KTSIRPILFLYVLGTFSAALVAVVVSFIYPSTLILVAESADITPPSGIVEVLHGLLNSIIANPIHALLNANYIGILAWAV GLGIALRHAADTTKALINDMSDAVTLVVRVVIRFAPLGIFGLVASTIAATGFGALQLYAQLLVVLIGCMLLVALVVNPLI VYWKIRRNPYPLVFACLRESGVTAFFTRSSAANIPVNMEMCKKMNLNEDTYSISIPLGATINMAGAAITITVLTLAAVHT LGITVDLPTALLLSVVAAICACGASGVAGGSLLLIPLACSMFGIPNDVAMQVVGVGFIIGVLQDSAETALNSSTDVLFTA AVCQAEDAKLANPDPLAAGKSV
Specific function: Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system) [H]
COG id: COG3633
COG function: function code E; Na+/serine symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI223468564, Length=254, Percent_Identity=28.3464566929134, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI223468566, Length=254, Percent_Identity=28.3464566929134, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI5032093, Length=254, Percent_Identity=28.3464566929134, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI4827012, Length=243, Percent_Identity=24.2798353909465, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI169790839, Length=288, Percent_Identity=24.3055555555556, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI66773030, Length=272, Percent_Identity=24.6323529411765, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI21314632, Length=259, Percent_Identity=27.4131274131274, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI40254478, Length=273, Percent_Identity=26.007326007326, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1789473, Length=407, Percent_Identity=77.1498771498772, Blast_Score=611, Evalue=1e-176, Organism=Escherichia coli, GI1790514, Length=439, Percent_Identity=23.4624145785877, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1789947, Length=391, Percent_Identity=24.2966751918159, Blast_Score=79, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17537407, Length=473, Percent_Identity=23.4672304439746, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71983099, Length=276, Percent_Identity=25.3623188405797, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71983106, Length=276, Percent_Identity=25.3623188405797, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71996953, Length=269, Percent_Identity=26.7657992565056, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193206505, Length=292, Percent_Identity=27.7397260273973, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24583025, Length=279, Percent_Identity=27.5985663082437, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI17137668, Length=279, Percent_Identity=27.5985663082437, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24583023, Length=279, Percent_Identity=27.5985663082437, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR023025 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43647; Mature: 43647
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEAMEKTQSVFIRFIVNGSLVKQILIGLVAGIVLALVSTPAAIAVGLLGSLFVGALKAV CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH APVLVLMLVIASIANHKKGQKTSIRPILFLYVLGTFSAALVAVVVSFIYPSTLILVAESA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCC DITPPSGIVEVLHGLLNSIIANPIHALLNANYIGILAWAVGLGIALRHAADTTKALINDM CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDAVTLVVRVVIRFAPLGIFGLVASTIAATGFGALQLYAQLLVVLIGCMLLVALVVNPLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYWKIRRNPYPLVFACLRESGVTAFFTRSSAANIPVNMEMCKKMNLNEDTYSISIPLGAT EEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCE INMAGAAITITVLTLAAVHTLGITVDLPTALLLSVVAAICACGASGVAGGSLLLIPLACS EECCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH MFGIPNDVAMQVVGVGFIIGVLQDSAETALNSSTDVLFTAAVCQAEDAKLANPDPLAAGK HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC SV CC >Mature Secondary Structure MLEAMEKTQSVFIRFIVNGSLVKQILIGLVAGIVLALVSTPAAIAVGLLGSLFVGALKAV CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH APVLVLMLVIASIANHKKGQKTSIRPILFLYVLGTFSAALVAVVVSFIYPSTLILVAESA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCC DITPPSGIVEVLHGLLNSIIANPIHALLNANYIGILAWAVGLGIALRHAADTTKALINDM CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDAVTLVVRVVIRFAPLGIFGLVASTIAATGFGALQLYAQLLVVLIGCMLLVALVVNPLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYWKIRRNPYPLVFACLRESGVTAFFTRSSAANIPVNMEMCKKMNLNEDTYSISIPLGAT EEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCE INMAGAAITITVLTLAAVHTLGITVDLPTALLLSVVAAICACGASGVAGGSLLLIPLACS EECCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH MFGIPNDVAMQVVGVGFIIGVLQDSAETALNSSTDVLFTAAVCQAEDAKLANPDPLAAGK HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC SV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA