| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218927772
Identifier: 218927772
GI number: 218927772
Start: 618919
End: 619473
Strand: Reverse
Name: 218927772
Synonym: YPO0575
Alternate gene names: NA
Gene position: 619473-618919 (Counterclockwise)
Preceding gene: 218927773
Following gene: 218927771
Centisome position: 13.31
GC content: 48.47
Gene sequence:
>555_bases TTGGGAGCGAAACGCAAATACATGCGCTGGTTGTTTGCTCTGTTTATTACCGTGTCTTGCTGGGCCAGTCTGGTCTCCGG CAATATGCTGTTGCCTCCCCATTCGACCCCATCTGGCGCAGCTTTATCCGCGTTGAGCACCGTTTATTCTGACAACCACT GCGCCAGTTATTCCCTCTCATCTTTTCACGCGCTTTCAGCCAAGCTACGTCTACAAAATCAAGACGTATCCCCGCAATTG CGTTTGGTCGGGGTGTCGGTCAAAAAAACGGCGATTAAGAATAGACTGAGTGCGGCGCAATTTACGGGCTCTGCAAATCT TTCTTTACTGAATAACACTTGGCCAGCGGCTTATTTTGCTATCTCACGCAGCCACCGGGCGGATGATATTTATAAACAAC CACGGCAATCGCTGTCGCTGGTTAATTATTCCAACTGGATATTCCATGCAGCAACACAGCAAAATCGTGTGGGCGGTTGG AAAGAGAGCAATACTCAATACAGCGGGATGCTTACCTATCACCATTATGACGCGATGGTTTTTATGCTTGCATAG
Upstream 100 bases:
>100_bases TTTAAACCATTGCTTAATTAATACTCAATGGATATCTATATTTCCCTGTTTCATATCTCGCTATTTTGCTAAAGTGGCAA CACTTTTTTATCTGGTTGCT
Downstream 100 bases:
>100_bases CATCAATGTAGCCATCATATCAATGTAGCCTGATATCATGACGGTTATAAATCATGACGGTTATAATCCGGTATTGCACA GTACCAACGCTGTCATCACG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MGAKRKYMRWLFALFITVSCWASLVSGNMLLPPHSTPSGAALSALSTVYSDNHCASYSLSSFHALSAKLRLQNQDVSPQL RLVGVSVKKTAIKNRLSAAQFTGSANLSLLNNTWPAAYFAISRSHRADDIYKQPRQSLSLVNYSNWIFHAATQQNRVGGW KESNTQYSGMLTYHHYDAMVFMLA
Sequences:
>Translated_184_residues MGAKRKYMRWLFALFITVSCWASLVSGNMLLPPHSTPSGAALSALSTVYSDNHCASYSLSSFHALSAKLRLQNQDVSPQL RLVGVSVKKTAIKNRLSAAQFTGSANLSLLNNTWPAAYFAISRSHRADDIYKQPRQSLSLVNYSNWIFHAATQQNRVGGW KESNTQYSGMLTYHHYDAMVFMLA >Mature_183_residues GAKRKYMRWLFALFITVSCWASLVSGNMLLPPHSTPSGAALSALSTVYSDNHCASYSLSSFHALSAKLRLQNQDVSPQLR LVGVSVKKTAIKNRLSAAQFTGSANLSLLNNTWPAAYFAISRSHRADDIYKQPRQSLSLVNYSNWIFHAATQQNRVGGWK ESNTQYSGMLTYHHYDAMVFMLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20498; Mature: 20366
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAKRKYMRWLFALFITVSCWASLVSGNMLLPPHSTPSGAALSALSTVYSDNHCASYSLS CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHH SFHALSAKLRLQNQDVSPQLRLVGVSVKKTAIKNRLSAAQFTGSANLSLLNNTWPAAYFA HHHHHHHEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHEE ISRSHRADDIYKQPRQSLSLVNYSNWIFHAATQQNRVGGWKESNTQYSGMLTYHHYDAMV ECCCCCCHHHHHHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCEEE FMLA EEEC >Mature Secondary Structure GAKRKYMRWLFALFITVSCWASLVSGNMLLPPHSTPSGAALSALSTVYSDNHCASYSLS CCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHH SFHALSAKLRLQNQDVSPQLRLVGVSVKKTAIKNRLSAAQFTGSANLSLLNNTWPAAYFA HHHHHHHEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHEE ISRSHRADDIYKQPRQSLSLVNYSNWIFHAATQQNRVGGWKESNTQYSGMLTYHHYDAMV ECCCCCCHHHHHHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCEEE FMLA EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA