| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is secA [H]
Identifier: 218927760
GI number: 218927760
Start: 609376
End: 612090
Strand: Direct
Name: secA [H]
Synonym: YPO0564
Alternate gene names: 218927760
Gene position: 609376-612090 (Clockwise)
Preceding gene: 218927759
Following gene: 218927761
Centisome position: 13.09
GC content: 48.58
Gene sequence:
>2715_bases ATGCTAATTAAATTATTAACCAAAGTTTTTGGTAGCCGTAACGATCGTACTCTGCGCCGCATGCAAAAAGTAGTTGATGT CATCAACCGCATGGAACCTGATATTGAAAAACTGACAGACACCGAATTGCGCGCTAAAACGGATGAGTTCCGTGAGCGTT TAGCGAAAGGTGAAGTGTTGGAAAACTTAATTCCTGAAGCCTTTGCGGTCGTTCGTGAAGCGAGTAAGCGTGTGTTCGGT ATGCGTCACTTCGACGTGCAACTGCTGGGTGGGATGGTTCTGAATGAGCGTTGTATCGCAGAAATGCGTACAGGTGAAGG TAAAACCTTGACCGCAACCCTGCCTGCTTACCTGAATGCGTTGAGTGGCCGTGGCGTGCATGTGGTTACCGTCAACGACT ATTTGGCTCAACGTGACGCCGAAAATAACCGCCCCTTGTTTGAGTTTTTGGGGCTGAGCATTGGTATCAATTTACCGAAT ATGACTGCGCCAGCCAAACGCGCAGCCTATGCCGCTGATATCACTTACGGTACCAATAACGAATTCGGTTTCGACTATTT ACGCGATAATATGGCGTTCAGTCCTGAAGAGCGTGTGCAGCGTCAACTTCACTATGCGTTAGTCGATGAAGTCGACTCCA TCCTGATTGATGAAGCTCGGACCCCGCTGATTATCTCCGGCCCCGCCGAAGACAGTTCCGAAATGTATATTCGGGTTAAC AAACTGATTCCAAAACTGATTCGTCAGGAAAAAGAAGACTCGGACAGCTTCCAGGGGGAAGGTCACTTCTCGGTAGATGA GAAATCACGTCAGGTTCATTTGACTGAGCGCGGTCTGATTCTGATTGAACAGATGTTGGTTGAAGCGGGCATCATGGATG AAGGCGAATCACTGTATTCGCCTGCTAACATTATGTTGATGCACCATGTCACGGCCGCCTTGCGTGCTCATGTGCTGTTT ACCCGTGACGTTGACTATATCGTGAAAGACGGTGAAGTGATTATTGTTGACGAACATACTGGTCGTACGATGCAAGGTCG CCGCTGGTCTGATGGTTTGCATCAGGCGGTTGAAGCGAAGGAAGGCGTGGAAATCCAGAATGAAAACCAGACACTGGCTT CTATCACTTTCCAGAACTATTTCCGTCTCTATGAAAAACTGGCTGGGATGACGGGTACCGCAGATACCGAAGCATTTGAA TTCAGCTCAATTTACAAGTTAGATACGATTGTCGTTCCGACTAACCGTCCTATGATCCGTAAGGATTTGGCTGATCTGGT CTATATGACCGAGCAGGAAAAGATCGGCGCGATTATCGAGGATATCCGCGAACGTACAGCGAACGGCCAGCCAGTGTTGG TCGGGACCATCTCGATTGAAAAATCCGAGGTTGTCTCTGCGGAGTTAACCAAAGCCGGTATTGAACACAAAGTGTTGAAC GCTAAATTCCATGCCATGGAAGCAGAGATTGTTTCTCAGGCCGGTCAGCCAGGGGCGGTAACCATCGCCACAAACATGGC GGGTCGTGGTACTGACATTGTGCTCGGTGGGAGCTGGCAGAGCGAGATTGCTGCGCTGGAAGATCCAACTGAAGAGCAAA TTGCGGCAATTAAAGCCGCTTGGCAGATTCGCCATGATGCAGTATTGGCATCGGGTGGTTTACACATCATTGGTACCGAG CGCCATGAGTCACGCCGTATCGATAACCAGTTACGTGGCCGTGCGGGTCGTCAGGGTGATGCGGGTTCTTCACGCTTCTA CTTGTCAATGGAAGATGCCTTGATGCGTATTTTTGCCTCTGACCGTGTGTCTGGCATGATGCGTAAATTGGGTATGAAGC CAGGTGAGGCGATTGAACATCCATGGGTGACCAAGGCCATTGCTAACGCACAACGTAAAGTTGAAAGCCGTAACTTCGAT ATTCGTAAGCAACTACTTGAATATGATGACGTAGCAAATGATCAGCGTCGGGCTATCTACAGCCAGCGTAATGAACTGCT GGATGTGTCTGATGTCAGCGAAACCATCAATAGTATTCGCGAAGATGTCTTCAAAACCACCATTGACAGCTACATTCCGA CCCAGTCACTGGAGGAAATGTGGGATATCGAAGGCCTGGAACAGCGCCTGAAAAATGATTTTGACTTAGATATGCCAATT GCTAAATGGCTGGAAGATGAGCCACAACTGCATGAGGAAACCTTGCGTGAACGTATTCTTCAGCAAGCTATTGAGACTTA TCAACGCAAAGAGGAAGTTGTTGGCATTGAAATGATGCGTAACTTCGAGAAAGGCGTGATGCTGCAAACGCTCGATTCCT TATGGAAAGAGCATTTGGCTGCAATGGATTACCTGCGTCAGGGTATCCACTTACGTGGCTATGCGCAGAAAGATCCTAAG CAGGAATATAAGCGTGAATCCTTCGCCATGTTCGCCGCAATGCTGGAATCACTGAAATATGAAGTGATTAGCGTTCTGAG CAAAGTACAAGTGCGGATGCCGGAAGAGGTCGAAGCGCTGGAGGTGCAACGCCGCGAAGAAGCAGAGCGTTTGGCTAGAC AGCAGCAACTGAGCCATCAGACTGACAACAGTGCATTGATGTCAGAAGAAGAGGTAAAAGTTGCTAACAGCCTTGAGCGT AAAGTGGGGCGTAATGATCCGTGCCCATGTGGTTCGGGTAAGAAATATAAACAGTGTCATGGCCGCTTGCAGTAA
Upstream 100 bases:
>100_bases CCGGTCCTGCCAACTTAAGCTAATTATTCTCTTGGTTTATCCCAATTTTATACAACCTTTGGCCGCCGGTTTGGTGGTCT TGTAAGAGATATTAAGAATC
Downstream 100 bases:
>100_bases TACTTGCGCTAACCTGTAATATAGATAAAGGGCGGTTAATACCGCCCTGAGGTTATTGACAAAGTGCCCGCGACGGAGAG AACAGGCAGATCGTAAAGAC
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 904; Mature: 904
Protein sequence:
>904_residues MLIKLLTKVFGSRNDRTLRRMQKVVDVINRMEPDIEKLTDTELRAKTDEFRERLAKGEVLENLIPEAFAVVREASKRVFG MRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALSGRGVHVVTVNDYLAQRDAENNRPLFEFLGLSIGINLPN MTAPAKRAAYAADITYGTNNEFGFDYLRDNMAFSPEERVQRQLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYIRVN KLIPKLIRQEKEDSDSFQGEGHFSVDEKSRQVHLTERGLILIEQMLVEAGIMDEGESLYSPANIMLMHHVTAALRAHVLF TRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFE FSSIYKLDTIVVPTNRPMIRKDLADLVYMTEQEKIGAIIEDIRERTANGQPVLVGTISIEKSEVVSAELTKAGIEHKVLN AKFHAMEAEIVSQAGQPGAVTIATNMAGRGTDIVLGGSWQSEIAALEDPTEEQIAAIKAAWQIRHDAVLASGGLHIIGTE RHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFD IRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIREDVFKTTIDSYIPTQSLEEMWDIEGLEQRLKNDFDLDMPI AKWLEDEPQLHEETLRERILQQAIETYQRKEEVVGIEMMRNFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPK QEYKRESFAMFAAMLESLKYEVISVLSKVQVRMPEEVEALEVQRREEAERLARQQQLSHQTDNSALMSEEEVKVANSLER KVGRNDPCPCGSGKKYKQCHGRLQ
Sequences:
>Translated_904_residues MLIKLLTKVFGSRNDRTLRRMQKVVDVINRMEPDIEKLTDTELRAKTDEFRERLAKGEVLENLIPEAFAVVREASKRVFG MRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALSGRGVHVVTVNDYLAQRDAENNRPLFEFLGLSIGINLPN MTAPAKRAAYAADITYGTNNEFGFDYLRDNMAFSPEERVQRQLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYIRVN KLIPKLIRQEKEDSDSFQGEGHFSVDEKSRQVHLTERGLILIEQMLVEAGIMDEGESLYSPANIMLMHHVTAALRAHVLF TRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFE FSSIYKLDTIVVPTNRPMIRKDLADLVYMTEQEKIGAIIEDIRERTANGQPVLVGTISIEKSEVVSAELTKAGIEHKVLN AKFHAMEAEIVSQAGQPGAVTIATNMAGRGTDIVLGGSWQSEIAALEDPTEEQIAAIKAAWQIRHDAVLASGGLHIIGTE RHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFD IRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIREDVFKTTIDSYIPTQSLEEMWDIEGLEQRLKNDFDLDMPI AKWLEDEPQLHEETLRERILQQAIETYQRKEEVVGIEMMRNFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPK QEYKRESFAMFAAMLESLKYEVISVLSKVQVRMPEEVEALEVQRREEAERLARQQQLSHQTDNSALMSEEEVKVANSLER KVGRNDPCPCGSGKKYKQCHGRLQ >Mature_904_residues MLIKLLTKVFGSRNDRTLRRMQKVVDVINRMEPDIEKLTDTELRAKTDEFRERLAKGEVLENLIPEAFAVVREASKRVFG MRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALSGRGVHVVTVNDYLAQRDAENNRPLFEFLGLSIGINLPN MTAPAKRAAYAADITYGTNNEFGFDYLRDNMAFSPEERVQRQLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYIRVN KLIPKLIRQEKEDSDSFQGEGHFSVDEKSRQVHLTERGLILIEQMLVEAGIMDEGESLYSPANIMLMHHVTAALRAHVLF TRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFE FSSIYKLDTIVVPTNRPMIRKDLADLVYMTEQEKIGAIIEDIRERTANGQPVLVGTISIEKSEVVSAELTKAGIEHKVLN AKFHAMEAEIVSQAGQPGAVTIATNMAGRGTDIVLGGSWQSEIAALEDPTEEQIAAIKAAWQIRHDAVLASGGLHIIGTE RHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFD IRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIREDVFKTTIDSYIPTQSLEEMWDIEGLEQRLKNDFDLDMPI AKWLEDEPQLHEETLRERILQQAIETYQRKEEVVGIEMMRNFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPK QEYKRESFAMFAAMLESLKYEVISVLSKVQVRMPEEVEALEVQRREEAERLARQQQLSHQTDNSALMSEEEVKVANSLER KVGRNDPCPCGSGKKYKQCHGRLQ
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=904, Percent_Identity=89.0486725663717, Blast_Score=1674, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 102626; Mature: 102626
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIKLLTKVFGSRNDRTLRRMQKVVDVINRMEPDIEKLTDTELRAKTDEFRERLAKGEVL CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHH ENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHH LSGRGVHVVTVNDYLAQRDAENNRPLFEFLGLSIGINLPNMTAPAKRAAYAADITYGTNN HCCCCEEEEEECHHHHHCCCCCCCCHHHHHCHHHCCCCCCCCCCHHHHHEEEEEEECCCC EFGFDYLRDNMAFSPEERVQRQLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYIRVN CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEHH KLIPKLIRQEKEDSDSFQGEGHFSVDEKSRQVHLTERGLILIEQMLVEAGIMDEGESLYS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHCHHHHHHHHHHHHCCCCCCHHHCC PANIMLMHHVTAALRAHVLFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAK CHHHHHHHHHHHHHHHHHHEECCCCCEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHH EGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTIVVPTNRPMIR CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEEEEECCCCCHHH KDLADLVYMTEQEKIGAIIEDIRERTANGQPVLVGTISIEKSEVVSAELTKAGIEHKVLN HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHCCHHHHHH AKFHAMEAEIVSQAGQPGAVTIATNMAGRGTDIVLGGSWQSEIAALEDPTEEQIAAIKAA HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHH WQIRHDAVLASGGLHIIGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFAS HHHHHHHEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHH DRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIY HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH SQRNELLDVSDVSETINSIREDVFKTTIDSYIPTQSLEEMWDIEGLEQRLKNDFDLDMPI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHCCCCCCCCCH AKWLEDEPQLHEETLRERILQQAIETYQRKEEVVGIEMMRNFEKGVMLQTLDSLWKEHLA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMDYLRQGIHLRGYAQKDPKQEYKRESFAMFAAMLESLKYEVISVLSKVQVRMPEEVEAL HHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EVQRREEAERLARQQQLSHQTDNSALMSEEEVKVANSLERKVGRNDPCPCGSGKKYKQCH HHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHC GRLQ CCCC >Mature Secondary Structure MLIKLLTKVFGSRNDRTLRRMQKVVDVINRMEPDIEKLTDTELRAKTDEFRERLAKGEVL CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHH ENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHH LSGRGVHVVTVNDYLAQRDAENNRPLFEFLGLSIGINLPNMTAPAKRAAYAADITYGTNN HCCCCEEEEEECHHHHHCCCCCCCCHHHHHCHHHCCCCCCCCCCHHHHHEEEEEEECCCC EFGFDYLRDNMAFSPEERVQRQLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYIRVN CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEHH KLIPKLIRQEKEDSDSFQGEGHFSVDEKSRQVHLTERGLILIEQMLVEAGIMDEGESLYS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHCHHHHHHHHHHHHCCCCCCHHHCC PANIMLMHHVTAALRAHVLFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAK CHHHHHHHHHHHHHHHHHHEECCCCCEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHH EGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTIVVPTNRPMIR CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEEEEECCCCCHHH KDLADLVYMTEQEKIGAIIEDIRERTANGQPVLVGTISIEKSEVVSAELTKAGIEHKVLN HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHCCHHHHHH AKFHAMEAEIVSQAGQPGAVTIATNMAGRGTDIVLGGSWQSEIAALEDPTEEQIAAIKAA HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHH WQIRHDAVLASGGLHIIGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFAS HHHHHHHEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHH DRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIY HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH SQRNELLDVSDVSETINSIREDVFKTTIDSYIPTQSLEEMWDIEGLEQRLKNDFDLDMPI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHCCCCCCCCCH AKWLEDEPQLHEETLRERILQQAIETYQRKEEVVGIEMMRNFEKGVMLQTLDSLWKEHLA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMDYLRQGIHLRGYAQKDPKQEYKRESFAMFAAMLESLKYEVISVLSKVQVRMPEEVEAL HHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EVQRREEAERLARQQQLSHQTDNSALMSEEEVKVANSLERKVGRNDPCPCGSGKKYKQCH HHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHC GRLQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA