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The map label for this gene is hcp1 [H]

Identifier: 218927700

GI number: 218927700

Start: 535959

End: 536477

Strand: Direct

Name: hcp1 [H]

Synonym: YPO0502

Alternate gene names: 218927700

Gene position: 535959-536477 (Clockwise)

Preceding gene: 218927699

Following gene: 218927701

Centisome position: 11.52

GC content: 49.13

Gene sequence:

>519_bases
ATGGCAGCTTTAGTCGATTACTTTCTCCATATCGAAGGTGTAGATGGTGAGTCTCCCGATCAGCAGTATAACGGATGGAT
CCAAGTACAGGCTTGGCAATGGGCGGAGGAGAATGCGGGGCGCTGGGGGCTAGGTGGCGGTGGTGGTTCTGGGAAAGTCG
AAATGAAGGACTTCGAATTTCGCATGGTGAGTAACAAAGCATCACCAAAACTATTTTTGATGTGTGCCATCGGTGAACAC
ATTCCGCAGGCCAAGTTGGTGTGTCGTAAATCAGGTCAAGGTCAACAAGACTTCCTGATTGTTACCTTCAGTAACTGTCT
GGTGTCCTCCTTTAAAACTGTCGGCAACATGCCTCTTGGTAAAGGGGACGCAGTATTCACCGACACGGTGCTGCCAACGG
ATGCCATCAGCCTTAACTTTGCACGTATCGAAGTGGAATACAAAGAGCAGCAACCTGATGGCTCGATGGGGGCCGTGATT
AAGGCTGGTTACGATCTGAAATTGAACAGCCGTATTTAA

Upstream 100 bases:

>100_bases
GCCAAAATTAAATAGGAAAGTACATTTTTAATGAGGCAACTTTGAGTTGCCGAATACTGATTTAACCCAACTTTAATGAC
ATTAATTCAGGAGTGAAAAA

Downstream 100 bases:

>100_bases
GTCAGAAATGCATTAGGACTGCTCTCGCGAGTTAGGAGAGCAGTCTTCCAAACTGGATTGGGGAGGGCTAATTATGGATA
TTTCAGCACCGATACTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MAALVDYFLHIEGVDGESPDQQYNGWIQVQAWQWAEENAGRWGLGGGGGSGKVEMKDFEFRMVSNKASPKLFLMCAIGEH
IPQAKLVCRKSGQGQQDFLIVTFSNCLVSSFKTVGNMPLGKGDAVFTDTVLPTDAISLNFARIEVEYKEQQPDGSMGAVI
KAGYDLKLNSRI

Sequences:

>Translated_172_residues
MAALVDYFLHIEGVDGESPDQQYNGWIQVQAWQWAEENAGRWGLGGGGGSGKVEMKDFEFRMVSNKASPKLFLMCAIGEH
IPQAKLVCRKSGQGQQDFLIVTFSNCLVSSFKTVGNMPLGKGDAVFTDTVLPTDAISLNFARIEVEYKEQQPDGSMGAVI
KAGYDLKLNSRI
>Mature_171_residues
AALVDYFLHIEGVDGESPDQQYNGWIQVQAWQWAEENAGRWGLGGGGGSGKVEMKDFEFRMVSNKASPKLFLMCAIGEHI
PQAKLVCRKSGQGQQDFLIVTFSNCLVSSFKTVGNMPLGKGDAVFTDTVLPTDAISLNFARIEVEYKEQQPDGSMGAVIK
AGYDLKLNSRI

Specific function: Required for assembly of the protein secretion apparatus HSI-I. Actively secreted during chronic infection of cystic fibrosis patients [H]

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 18842; Mature: 18710

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALVDYFLHIEGVDGESPDQQYNGWIQVQAWQWAEENAGRWGLGGGGGSGKVEMKDFEF
CCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCEEEEEEEEE
RMVSNKASPKLFLMCAIGEHIPQAKLVCRKSGQGQQDFLIVTFSNCLVSSFKTVGNMPLG
EEECCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEHHHHHHHHHHHCCCCCC
KGDAVFTDTVLPTDAISLNFARIEVEYKEQQPDGSMGAVIKAGYDLKLNSRI
CCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEECCCCEEECCCC
>Mature Secondary Structure 
AALVDYFLHIEGVDGESPDQQYNGWIQVQAWQWAEENAGRWGLGGGGGSGKVEMKDFEF
CCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCEEEEEEEEE
RMVSNKASPKLFLMCAIGEHIPQAKLVCRKSGQGQQDFLIVTFSNCLVSSFKTVGNMPLG
EEECCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEHHHHHHHHHHHCCCCCC
KGDAVFTDTVLPTDAISLNFARIEVEYKEQQPDGSMGAVIKAGYDLKLNSRI
CCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEECCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]