| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218927598
Identifier: 218927598
GI number: 218927598
Start: 412139
End: 413551
Strand: Direct
Name: 218927598
Synonym: YPO0396
Alternate gene names: NA
Gene position: 412139-413551 (Clockwise)
Preceding gene: 218927595
Following gene: 218927599
Centisome position: 8.86
GC content: 52.51
Gene sequence:
>1413_bases ATGCTGAGCAGAGAGGACTTTTACATGATAAAGCAAATGCGCCAGCAGGGGGCGTACATTAAATTGCAGGAACAAGCCAA TGCGTTAGCACATATTCAGGCGTTGAACTTCGAGAGTATTGACCTACCCACTGCGCAGCGCCAACTGGAAGAATTACAGG CTCGTCTGGATAGGCTGACCCATCCGCAGTCCGATATCGCTATTGCTAAGGCCGCACTGGATGAGGCTGAAGCACGGCAA AAAGAGCTTGAAAGGCAATATCAACAAGAAGTGACTGCCTGTGCTGGTTTGAAGAAGGATCTCGAACGTGCAGCAATGCT CAGCCGTAAAGTCCATAACATCGCAAAACAAGGCATGACCGGTGCACTACAAGCGTTAGGCGCAGCGCATTTTCCTCAGG TGGCCCCCGAACAACTGGACGACATTCAGGACATTGAACGTGAGCATGCACGCCAATTGCAAGGCCGACTCAATGAGGTC AATGACCGATTACAACGGTTACGGGAAGAGCTTATCAAGCGGATGTCCGACGCTAAAAAAGAGGATACTGGCGCGCTTTC GGAAGTGGGGCGGGAATTAGACGATATTCCCAACTATCTGGCGCGCCTACAGACCTTGACCGAAGAGGCGCTTCCCGAAA AACTTAAGCGTTTCCAAGAATATCTGAACCGTTCCTCTGATGATGGGGTGACGCAGTTACTCAGTCATATCGACCATGAA GTTGCGTTGATCGAGGAGCGTCTGGAAGCACTTAATGACACCATGCGCCGAGTCGATTTTCAGTCTGGGCGCTACCTGTG TTTGATCGCCAAACCGGTGGTGCATGACAGTATGCGCACGTTACTGCGCGCGCAACGCCAGCTTAACTCGGCTCGTTTCG TCGATGATGATGGCGAGAGCCAATATAAGGCGCTGCAAGCGTTGGTCGGATTACTGAAAGATGCCTGCGAGCGCAACCGC ACCCAAGGGGCCAGAGCGTTGCTGGACCCCCGTTTCCGCCTTGAATTCGCCGTTTCGGTGATTGAGCGGGAAACCGGGAG CGTCATTGAGACTCGTACCGGTTCACAAGGCGGTAGTGGTGGAGAAAAAGAAATCATCGCGTCTTATGTACTGACCGCAT CCCTAAGCTATGCGCTGTGCCCTGATGGTCGCACCAAGCCGTTGTTCGGTACTATTATTCTGGATGAGGCATTCTCGCGT AGCTCTCATGTTGTCGCCGGGCGGATTATCGCTGCCCTGAGGGAATTTGGTCTGCATGCGGTCTTCATCACGCCCAATAA GGAGATGCGTCTGTTGCGTCATCACACACGCTCGGCGATCGTTGTTCATCGGCGTGGGCCGGATTCCAGTCTGGTCTCAT TAAGTTGGGAAGATCTAAATGAACATCATCAGCAGCGCAACAGAGCAATATGA
Upstream 100 bases:
>100_bases GTTAGCGCCAGTGATATAAGACGGTAATTCACCATTAGTATTGTCCGCTCCACCCAACATGTTGTTTCCTTGAGGTTCTC ACACCAGAAAGGACATCAAC
Downstream 100 bases:
>100_bases AATCACCCATTGATATTGGCAGGCAATTGGCCAGACAGTGGCATCAGTCTAAGGTGAGGTCTGAGCGCTTACTCACACCC GGCTGCTGGCCTTTGCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MLSREDFYMIKQMRQQGAYIKLQEQANALAHIQALNFESIDLPTAQRQLEELQARLDRLTHPQSDIAIAKAALDEAEARQ KELERQYQQEVTACAGLKKDLERAAMLSRKVHNIAKQGMTGALQALGAAHFPQVAPEQLDDIQDIEREHARQLQGRLNEV NDRLQRLREELIKRMSDAKKEDTGALSEVGRELDDIPNYLARLQTLTEEALPEKLKRFQEYLNRSSDDGVTQLLSHIDHE VALIEERLEALNDTMRRVDFQSGRYLCLIAKPVVHDSMRTLLRAQRQLNSARFVDDDGESQYKALQALVGLLKDACERNR TQGARALLDPRFRLEFAVSVIERETGSVIETRTGSQGGSGGEKEIIASYVLTASLSYALCPDGRTKPLFGTIILDEAFSR SSHVVAGRIIAALREFGLHAVFITPNKEMRLLRHHTRSAIVVHRRGPDSSLVSLSWEDLNEHHQQRNRAI
Sequences:
>Translated_470_residues MLSREDFYMIKQMRQQGAYIKLQEQANALAHIQALNFESIDLPTAQRQLEELQARLDRLTHPQSDIAIAKAALDEAEARQ KELERQYQQEVTACAGLKKDLERAAMLSRKVHNIAKQGMTGALQALGAAHFPQVAPEQLDDIQDIEREHARQLQGRLNEV NDRLQRLREELIKRMSDAKKEDTGALSEVGRELDDIPNYLARLQTLTEEALPEKLKRFQEYLNRSSDDGVTQLLSHIDHE VALIEERLEALNDTMRRVDFQSGRYLCLIAKPVVHDSMRTLLRAQRQLNSARFVDDDGESQYKALQALVGLLKDACERNR TQGARALLDPRFRLEFAVSVIERETGSVIETRTGSQGGSGGEKEIIASYVLTASLSYALCPDGRTKPLFGTIILDEAFSR SSHVVAGRIIAALREFGLHAVFITPNKEMRLLRHHTRSAIVVHRRGPDSSLVSLSWEDLNEHHQQRNRAI >Mature_470_residues MLSREDFYMIKQMRQQGAYIKLQEQANALAHIQALNFESIDLPTAQRQLEELQARLDRLTHPQSDIAIAKAALDEAEARQ KELERQYQQEVTACAGLKKDLERAAMLSRKVHNIAKQGMTGALQALGAAHFPQVAPEQLDDIQDIEREHARQLQGRLNEV NDRLQRLREELIKRMSDAKKEDTGALSEVGRELDDIPNYLARLQTLTEEALPEKLKRFQEYLNRSSDDGVTQLLSHIDHE VALIEERLEALNDTMRRVDFQSGRYLCLIAKPVVHDSMRTLLRAQRQLNSARFVDDDGESQYKALQALVGLLKDACERNR TQGARALLDPRFRLEFAVSVIERETGSVIETRTGSQGGSGGEKEIIASYVLTASLSYALCPDGRTKPLFGTIILDEAFSR SSHVVAGRIIAALREFGLHAVFITPNKEMRLLRHHTRSAIVVHRRGPDSSLVSLSWEDLNEHHQQRNRAI
Specific function: Unknown
COG id: COG4913
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53244; Mature: 53244
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSREDFYMIKQMRQQGAYIKLQEQANALAHIQALNFESIDLPTAQRQLEELQARLDRLT CCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC HPQSDIAIAKAALDEAEARQKELERQYQQEVTACAGLKKDLERAAMLSRKVHNIAKQGMT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH GALQALGAAHFPQVAPEQLDDIQDIEREHARQLQGRLNEVNDRLQRLREELIKRMSDAKK HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EDTGALSEVGRELDDIPNYLARLQTLTEEALPEKLKRFQEYLNRSSDDGVTQLLSHIDHE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VALIEERLEALNDTMRRVDFQSGRYLCLIAKPVVHDSMRTLLRAQRQLNSARFVDDDGES HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH QYKALQALVGLLKDACERNRTQGARALLDPRFRLEFAVSVIERETGSVIETRTGSQGGSG HHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCC GEKEIIASYVLTASLSYALCPDGRTKPLFGTIILDEAFSRSSHVVAGRIIAALREFGLHA CHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEE VFITPNKEMRLLRHHTRSAIVVHRRGPDSSLVSLSWEDLNEHHQQRNRAI EEECCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHCCCC >Mature Secondary Structure MLSREDFYMIKQMRQQGAYIKLQEQANALAHIQALNFESIDLPTAQRQLEELQARLDRLT CCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC HPQSDIAIAKAALDEAEARQKELERQYQQEVTACAGLKKDLERAAMLSRKVHNIAKQGMT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH GALQALGAAHFPQVAPEQLDDIQDIEREHARQLQGRLNEVNDRLQRLREELIKRMSDAKK HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EDTGALSEVGRELDDIPNYLARLQTLTEEALPEKLKRFQEYLNRSSDDGVTQLLSHIDHE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VALIEERLEALNDTMRRVDFQSGRYLCLIAKPVVHDSMRTLLRAQRQLNSARFVDDDGES HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH QYKALQALVGLLKDACERNRTQGARALLDPRFRLEFAVSVIERETGSVIETRTGSQGGSG HHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCC GEKEIIASYVLTASLSYALCPDGRTKPLFGTIILDEAFSRSSHVVAGRIIAALREFGLHA CHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEE VFITPNKEMRLLRHHTRSAIVVHRRGPDSSLVSLSWEDLNEHHQQRNRAI EEECCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA