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The map label for this gene is 218927590

Identifier: 218927590

GI number: 218927590

Start: 405109

End: 406425

Strand: Direct

Name: 218927590

Synonym: YPO0388

Alternate gene names: NA

Gene position: 405109-406425 (Clockwise)

Preceding gene: 218927589

Following gene: 218927591

Centisome position: 8.71

GC content: 48.44

Gene sequence:

>1317_bases
ATGAAGTCTCGTAAGGACTTTACCGTCTTCGAATATGGTCACCTGATTAGCGACAAAGACAGTGGCCGCATAAATAATGC
GGTCTCGCTGCCTCCGCAGCTGTTTGAGTGGCTTGAGCAACGTTGCCTGAAAGATGACGCGGATAACACTCACCGTCTGC
TCACCCTTGGAAGTCGGGGGGGCGTAAAAACGCTGCAGGTAAAAAACTATGCTGGTGTTATCTCTCTTCCGGGGAATGCG
TTTATTGAAGTGTTGCCAAAAACGGGGCGGCGTGATGAGAACATTGATATTGCACGTCAGCAGCTTTTGATGATGCTACG
CACGCTAAAATCATTTCGCCATATAGCCACTTCAGCATCCAGAGTTCGAACCTCGAAGATGCCGCTGATGGATGTTTTTA
TTCAGCAGTTTATCGATAGCGTACAGCAGATTGTGCGCCAGGGGCTAAAGCGTGACTATTTACGCCAGCAGGACAATCTG
CCTTGGATGAAAGGGAAGTTACGGGTCTCAGCTCAAATAAGCAAAAACTGTGTGCATCGGGATCGCTTTCAGGTGGAGTT
TGACGATTATAGCTCTGAACGTCCGGAGAACCGGATACTGAAAACCGCCATCGATAAAATTCGCCGTCAGATCAGCAACC
CACAGCTACTACTACAAGTTAACTCTTTGCAGGTGCACTTTGACGACATTACGCCTGTCGGTGATGTTCGCATCGCCTTC
GACCAGGTACGTCTTGACCGACATATGCGTCACTATGAACTTGCCTTGGCGTGGGCGCGGCTGATTTTGATGGGGCAGTC
GCCCCACTGCATGCAGGGCGACGCCAACGCAATTTCACTGCTTTTCCCAATGGAAGCTGTGTTTGAATCTTTTGTGACTG
CATGGATGCGTCATCGTTATAACGATAACTGGCATGTGAAGGCACAGGTGGATTCACACACCTTGGTTCGTCTCAATGGC
AAAGGAGTATTTAAGCTTAGACCCGATATCCATCTACGACCTCGTGGGGAGAATGGGGATCAGGCGATGATTTGTGATGT
TAAATGGAAAATGGTGGAGAGCGGAAAGGCGACACTCGAACAATCGCAGGCTGACCTCTACCAGATGCTGGCTTACGGTG
TGAACTATCAGGAGGGGATAGGGGATATGCTGCTGATTTATCCTTCGCATGAGGGTTTTAGTCAGCCGTTACCTTATCCA
TATGAATTCAGCCATCAAAAGGAAAACCCGCTGCGTTTATGGGTTGTGCCATTTTTCATTGGTGACAGTTTGCAAAGTTC
TGATCTGCGTTTCCCTGATGGGAAAATATTGATTTAA

Upstream 100 bases:

>100_bases
CCAGTTTCCATCTAGCCCCTGAGGACGACAAGGTTTGGGATAACCCGCTCGCCTGGCAACAAATTTATGCGCCACATAAA
GGTAACCCGGTGAGTGGGGA

Downstream 100 bases:

>100_bases
AACCGTGTTATTCTCTTTCGTACAATTAGCCATAACGGTGTTGTACTGATATGGCTCTGTACCTACTTGCGCTGTCTGAT
GTTTGTACGGATTTTTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: 5-Methylcytosine Restriction System Component-Like Protein; 5-Methylcytosine Restriction System Component; McrBC 5-Methylcytosine Restriction System Component-Like; McrBC Catalytic Subunit McrC; McrBC 5-Methylcytosine Restriction Subunit McrC; 5-Methylcytosine Restriction System Component- Like Protein; McrBC Restriction Endonuclease System Subunit McrC; 5-Methylcytosine-Specific Restriction Protein C

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MKSRKDFTVFEYGHLISDKDSGRINNAVSLPPQLFEWLEQRCLKDDADNTHRLLTLGSRGGVKTLQVKNYAGVISLPGNA
FIEVLPKTGRRDENIDIARQQLLMMLRTLKSFRHIATSASRVRTSKMPLMDVFIQQFIDSVQQIVRQGLKRDYLRQQDNL
PWMKGKLRVSAQISKNCVHRDRFQVEFDDYSSERPENRILKTAIDKIRRQISNPQLLLQVNSLQVHFDDITPVGDVRIAF
DQVRLDRHMRHYELALAWARLILMGQSPHCMQGDANAISLLFPMEAVFESFVTAWMRHRYNDNWHVKAQVDSHTLVRLNG
KGVFKLRPDIHLRPRGENGDQAMICDVKWKMVESGKATLEQSQADLYQMLAYGVNYQEGIGDMLLIYPSHEGFSQPLPYP
YEFSHQKENPLRLWVVPFFIGDSLQSSDLRFPDGKILI

Sequences:

>Translated_438_residues
MKSRKDFTVFEYGHLISDKDSGRINNAVSLPPQLFEWLEQRCLKDDADNTHRLLTLGSRGGVKTLQVKNYAGVISLPGNA
FIEVLPKTGRRDENIDIARQQLLMMLRTLKSFRHIATSASRVRTSKMPLMDVFIQQFIDSVQQIVRQGLKRDYLRQQDNL
PWMKGKLRVSAQISKNCVHRDRFQVEFDDYSSERPENRILKTAIDKIRRQISNPQLLLQVNSLQVHFDDITPVGDVRIAF
DQVRLDRHMRHYELALAWARLILMGQSPHCMQGDANAISLLFPMEAVFESFVTAWMRHRYNDNWHVKAQVDSHTLVRLNG
KGVFKLRPDIHLRPRGENGDQAMICDVKWKMVESGKATLEQSQADLYQMLAYGVNYQEGIGDMLLIYPSHEGFSQPLPYP
YEFSHQKENPLRLWVVPFFIGDSLQSSDLRFPDGKILI
>Mature_438_residues
MKSRKDFTVFEYGHLISDKDSGRINNAVSLPPQLFEWLEQRCLKDDADNTHRLLTLGSRGGVKTLQVKNYAGVISLPGNA
FIEVLPKTGRRDENIDIARQQLLMMLRTLKSFRHIATSASRVRTSKMPLMDVFIQQFIDSVQQIVRQGLKRDYLRQQDNL
PWMKGKLRVSAQISKNCVHRDRFQVEFDDYSSERPENRILKTAIDKIRRQISNPQLLLQVNSLQVHFDDITPVGDVRIAF
DQVRLDRHMRHYELALAWARLILMGQSPHCMQGDANAISLLFPMEAVFESFVTAWMRHRYNDNWHVKAQVDSHTLVRLNG
KGVFKLRPDIHLRPRGENGDQAMICDVKWKMVESGKATLEQSQADLYQMLAYGVNYQEGIGDMLLIYPSHEGFSQPLPYP
YEFSHQKENPLRLWVVPFFIGDSLQSSDLRFPDGKILI

Specific function: Unknown

COG id: COG4268

COG function: function code V; McrBC 5-methylcytosine restriction system component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50694; Mature: 50694

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRKDFTVFEYGHLISDKDSGRINNAVSLPPQLFEWLEQRCLKDDADNTHRLLTLGSRG
CCCCCCCEEEECCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCC
GVKTLQVKNYAGVISLPGNAFIEVLPKTGRRDENIDIARQQLLMMLRTLKSFRHIATSAS
CEEEEEEECCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RVRTSKMPLMDVFIQQFIDSVQQIVRQGLKRDYLRQQDNLPWMKGKLRVSAQISKNCVHR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHCC
DRFQVEFDDYSSERPENRILKTAIDKIRRQISNPQLLLQVNSLQVHFDDITPVGDVRIAF
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECEEEEECCCCCCCCEEEHH
DQVRLDRHMRHYELALAWARLILMGQSPHCMQGDANAISLLFPMEAVFESFVTAWMRHRY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHC
NDNWHVKAQVDSHTLVRLNGKGVFKLRPDIHLRPRGENGDQAMICDVKWKMVESGKATLE
CCCEEEEEEECCEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEEEEEEEHHCCHHHHH
QSQADLYQMLAYGVNYQEGIGDMLLIYPSHEGFSQPLPYPYEFSHQKENPLRLWVVPFFI
HHHHHHHHHHHHCCCHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
GDSLQSSDLRFPDGKILI
CCCCCCCCCCCCCCCEEC
>Mature Secondary Structure
MKSRKDFTVFEYGHLISDKDSGRINNAVSLPPQLFEWLEQRCLKDDADNTHRLLTLGSRG
CCCCCCCEEEECCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCC
GVKTLQVKNYAGVISLPGNAFIEVLPKTGRRDENIDIARQQLLMMLRTLKSFRHIATSAS
CEEEEEEECCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RVRTSKMPLMDVFIQQFIDSVQQIVRQGLKRDYLRQQDNLPWMKGKLRVSAQISKNCVHR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHCC
DRFQVEFDDYSSERPENRILKTAIDKIRRQISNPQLLLQVNSLQVHFDDITPVGDVRIAF
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECEEEEECCCCCCCCEEEHH
DQVRLDRHMRHYELALAWARLILMGQSPHCMQGDANAISLLFPMEAVFESFVTAWMRHRY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHC
NDNWHVKAQVDSHTLVRLNGKGVFKLRPDIHLRPRGENGDQAMICDVKWKMVESGKATLE
CCCEEEEEEECCEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEEEEEEEHHCCHHHHH
QSQADLYQMLAYGVNYQEGIGDMLLIYPSHEGFSQPLPYPYEFSHQKENPLRLWVVPFFI
HHHHHHHHHHHHCCCHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
GDSLQSSDLRFPDGKILI
CCCCCCCCCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA