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The map label for this gene is ssb

Identifier: 218927530

GI number: 218927530

Start: 334738

End: 335286

Strand: Direct

Name: ssb

Synonym: YPO0325

Alternate gene names: 218927530

Gene position: 334738-335286 (Clockwise)

Preceding gene: 218927528

Following gene: 218927536

Centisome position: 7.19

GC content: 56.83

Gene sequence:

>549_bases
ATGGCCAGCAGAGGCGTAAACAAAGTGATTTTGGTCGGGAATTTGGGCCAAGACCCGGAAGTCCGCTATATGCCGAACGG
CGGCGCTGTTGCCAATATCACCCTGGCCACATCTGAAAGCTGGCGTGATAAGCAAACCGGCGAGCAAAAAGAAAAAACAG
AATGGCACCGCGTGGTGTTGTTCGGAAAACTTGCCGAAGTGGCTGGTGAATATCTGCGTAAAGGCTCTCAGGTTTATATT
GAAGGCGCACTGCAAACCCGTAAGTGGCAAGATCAAAGTGGCCAGGAACGTTACACCACAGAAGTTGTGGTTAACGTGGG
TGGTACCATGCAAATGCTAGGGGGCCGTCAGGGCGGTGGTGCTCCTGCAGGGGGGGGCGCAGCGCCACAAGACGGCGGGG
CACAAGGCGGTTGGGGTCAACCTCAGCAGCCTCAGGGTGGCAATCAATTCAGTGGCGGTCAGGCTTCACGTCCGGCGCAG
CCTGCGCCAGCCGCACCACAAGGCGGTAACGAGCCACCAATGGATTTCGACGACGACATCCCGTTCTAA

Upstream 100 bases:

>100_bases
AATATATTTCGCAGTTATGATCATCCGTGTTGTTTAACAGTTAGCGTGTTAAACTTACTGGTTTATACTTTATAAAATTT
ATTTCATCAGGAGAGTTCAC

Downstream 100 bases:

>100_bases
GGCTAGTTTTAAACGTCAGATTAGTCTTAGACGTCAGATTAGTTTTAGATGTCAGATTAGTTTTAGACGTCAGATTAGCT
TTAAACGGCCGCGCCACGGA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGALQTRKWQDQSGQERYTTEVVVNVGGTMQMLGGRQGGGAPAGGGAAPQDGGAQGGWGQPQQPQGGNQFSGGQASRPAQ
PAPAAPQGGNEPPMDFDDDIPF

Sequences:

>Translated_182_residues
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGALQTRKWQDQSGQERYTTEVVVNVGGTMQMLGGRQGGGAPAGGGAAPQDGGAQGGWGQPQQPQGGNQFSGGQASRPAQ
PAPAAPQGGNEPPMDFDDDIPF
>Mature_181_residues
ASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYIE
GALQTRKWQDQSGQERYTTEVVVNVGGTMQMLGGRQGGGAPAGGGAAPQDGGAQGGWGQPQQPQGGNQFSGGQASRPAQP
APAAPQGGNEPPMDFDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Homo sapiens, GI4507231, Length=109, Percent_Identity=34.8623853211009, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1790494, Length=182, Percent_Identity=84.6153846153846, Blast_Score=270, Evalue=4e-74,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SSB_YERPE (Q8ZJ06)

Other databases:

- EMBL:   AL590842
- EMBL:   AE009952
- EMBL:   AE017042
- PIR:   AG0040
- RefSeq:   NP_667919.1
- RefSeq:   NP_991873.1
- RefSeq:   YP_002345405.1
- ProteinModelPortal:   Q8ZJ06
- SMR:   Q8ZJ06
- GeneID:   1145529
- GeneID:   1173169
- GeneID:   2764106
- GenomeReviews:   AE009952_GR
- GenomeReviews:   AE017042_GR
- GenomeReviews:   AL590842_GR
- KEGG:   ype:YPO0325
- KEGG:   ypk:y0582
- KEGG:   ypm:YP_0480
- HOGENOM:   HBG755544
- OMA:   IATSENW
- ProtClustDB:   PRK09010
- BioCyc:   YPES187410:Y0582-MONOMER
- BioCyc:   YPES214092:YPO0325-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 19164; Mature: 19033

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVL
CCCCCCCEEEEECCCCCCCCEEECCCCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHHH
FGKLAEVAGEYLRKGSQVYIEGALQTRKWQDQSGQERYTTEVVVNVGGTMQMLGGRQGGG
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCC
APAGGGAAPQDGGAQGGWGQPQQPQGGNQFSGGQASRPAQPAPAAPQGGNEPPMDFDDDI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PF
CC
>Mature Secondary Structure 
ASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVL
CCCCCCEEEEECCCCCCCCEEECCCCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHHH
FGKLAEVAGEYLRKGSQVYIEGALQTRKWQDQSGQERYTTEVVVNVGGTMQMLGGRQGGG
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCC
APAGGGAAPQDGGAQGGWGQPQQPQGGNQFSGGQASRPAQPAPAAPQGGNEPPMDFDDDI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430