| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is terD [H]
Identifier: 218927505
GI number: 218927505
Start: 299025
End: 299603
Strand: Direct
Name: terD [H]
Synonym: YPO0298
Alternate gene names: 218927505
Gene position: 299025-299603 (Clockwise)
Preceding gene: 218927504
Following gene: 218927506
Centisome position: 6.43
GC content: 48.19
Gene sequence:
>579_bases ATGGGTGTATCTCTTTCGAAAGGCGGTAATGTCTCCCTGAGTAAAGAAGCTCCAACAATGACGAATGTGCTGATTGGCCT CGGCTGGGATGCCCGTTCTACAGATGGTCAGGATTTCGACCTGGATGCTTCAGCTTTTCTTTTGACTGCAAACGGCAAAG TACGTAACGATGCAGATTTCATTTTCTACAACAATCTGAAATCATCTGATGGTTCAGTGATGCACACCGGTGATAACCGT ACTGGTGAAGGCGAGGGTGACGATGAGTCGCTGAAAATCAAATTGCCTTTGATCCCAGCAGATGTGGATAAGATTGTTTT CGTTGTCACTATTCATGATGCTCAGGCGCGCCGTCAGAGCTTCGGTCAGGTGGCTAATGCCTTTATTCGCCTGGTAAACG ATGATAATGGCGTTGAAATTGCGCGTTACGACCTGTCTGAAGATGCGTCCACCGAAACAGCGATGCTGTTTGGTGAGCTG TATCGCCATAATGCGGAGTGGAAATTCCGTGCGGTAGGTCAGGGCTATGCGGGTGGTTTGTCGTCTGTTTGTGCTCAGTA TGGCATCAACGCATCTTAA
Upstream 100 bases:
>100_bases GTTCCCTGAAAAGGATTCAAAGGAAGGACAGCACTAACGTAGGGTTTTAGAGACCTGATGATGTAAATTGAATTAATACT TAACTACTGAGGAAATGAAA
Downstream 100 bases:
>100_bases TCATTCCCTTCGTTTTTGACGTTGCAGGGGGTAGCTACGTCAGCGTATCCGTTGAATAAATTCATCGGGGTTTGCTGGTT ACTTACCTGTAACGCCAATC
Product: tellurium resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MGVSLSKGGNVSLSKEAPTMTNVLIGLGWDARSTDGQDFDLDASAFLLTANGKVRNDADFIFYNNLKSSDGSVMHTGDNR TGEGEGDDESLKIKLPLIPADVDKIVFVVTIHDAQARRQSFGQVANAFIRLVNDDNGVEIARYDLSEDASTETAMLFGEL YRHNAEWKFRAVGQGYAGGLSSVCAQYGINAS
Sequences:
>Translated_192_residues MGVSLSKGGNVSLSKEAPTMTNVLIGLGWDARSTDGQDFDLDASAFLLTANGKVRNDADFIFYNNLKSSDGSVMHTGDNR TGEGEGDDESLKIKLPLIPADVDKIVFVVTIHDAQARRQSFGQVANAFIRLVNDDNGVEIARYDLSEDASTETAMLFGEL YRHNAEWKFRAVGQGYAGGLSSVCAQYGINAS >Mature_191_residues GVSLSKGGNVSLSKEAPTMTNVLIGLGWDARSTDGQDFDLDASAFLLTANGKVRNDADFIFYNNLKSSDGSVMHTGDNRT GEGEGDDESLKIKLPLIPADVDKIVFVVTIHDAQARRQSFGQVANAFIRLVNDDNGVEIARYDLSEDASTETAMLFGELY RHNAEWKFRAVGQGYAGGLSSVCAQYGINAS
Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003325 [H]
Pfam domain/function: PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 20676; Mature: 20545
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSLSKGGNVSLSKEAPTMTNVLIGLGWDARSTDGQDFDLDASAFLLTANGKVRNDADF CCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCE IFYNNLKSSDGSVMHTGDNRTGEGEGDDESLKIKLPLIPADVDKIVFVVTIHDAQARRQS EEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCHHHHHHH FGQVANAFIRLVNDDNGVEIARYDLSEDASTETAMLFGELYRHNAEWKFRAVGQGYAGGL HHHHHHHHEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCH SSVCAQYGINAS HHHHHHHCCCCC >Mature Secondary Structure GVSLSKGGNVSLSKEAPTMTNVLIGLGWDARSTDGQDFDLDASAFLLTANGKVRNDADF CCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCE IFYNNLKSSDGSVMHTGDNRTGEGEGDDESLKIKLPLIPADVDKIVFVVTIHDAQARRQS EEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCHHHHHHH FGQVANAFIRLVNDDNGVEIARYDLSEDASTETAMLFGELYRHNAEWKFRAVGQGYAGGL HHHHHHHHEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCH SSVCAQYGINAS HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3049247 [H]