Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
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Accession | NC_003106 |
Length | 2,694,756 |
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The map label for this gene is 15921477
Identifier: 15921477
GI number: 15921477
Start: 1215282
End: 1216082
Strand: Direct
Name: 15921477
Synonym: ST1214
Alternate gene names: NA
Gene position: 1215282-1216082 (Clockwise)
Preceding gene: 15921476
Following gene: 15921478
Centisome position: 45.1
GC content: 30.71
Gene sequence:
>801_bases ATGTTAGATAAGATCTCATCCTTTTTTAATAATGATAGGAAGCGAAAGGCACAATTAGGTAAAATTATCACTGAGATATC TTTGAAGTTAAAAGACCAACAAGATAGATTAGATGAAGCTATAAGAAGATTAAGAGATAGAGATAAAGAACTTTATGAAA AGGTTATTAGGGCACAAATCGAAGGTGATATGGCTAAGGCTACAATCTATGCACAAGAAATCTCAGATATTAGAAAAATG ATTAAAATTATCTATACTGCTTTCTTAGCTATAGAAAAAGTTAGAATTAAATTAGATACTGTACAAGAACTTCAAGGAGT TTCGTTAGTCTTACTTCCAGTTATGAAAGTATTAGGACAATTAAAAGATCAAATAAAAGGAATTGCACCAGAAGTAGCCA TTGCATTAGATTCTATAACTAGCAACGTTAATAGTATAGCTATAGAAACTGGGGCTTTGAGTGAGAGAACAGTTGTGCCT ACTGTAGTTGATGAAGAGGCTCAGAAAATATTAAATGAAACAAAGAAAATGGCTGAGGAAAAATTAAAAGAGATTTTACC AGAATTACCTTATCCACCTAGTGATACACCATCATATAAGAGGCAAGTAATAGAAATTAAACAAGAACAGACACAACAAA AAAGAAAAGTTACAGCTGACGATTTACTTGAATATATAAGACAAACTGGTGGGTTCTTAGATCTAGAACATTTTAGTAAA ATATATAATGTAGATAAACAAGAAGTTTTGGACTTATTAAAATCCTTGGCTTCAAAAGGATTAATTACATTAGAGGAGTA G
Upstream 100 bases:
>100_bases ACAAGAACAACCTAATAAGAGCGATGGTAATAAATCAGAAGTACCATTACCAATACCAGTAAGAGTAATAAATACTTTGT AACTAATTTAGTGAAATAGT
Downstream 100 bases:
>100_bases GGCTATGTCTGCACAATCAATGCTAGAAGAGATGGCTAGGAAATATGCTATTAATGCAGTAAAAGCTGATAAAGAAGGAA AGGCCGAAGATGCTATAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MLDKISSFFNNDRKRKAQLGKIITEISLKLKDQQDRLDEAIRRLRDRDKELYEKVIRAQIEGDMAKATIYAQEISDIRKM IKIIYTAFLAIEKVRIKLDTVQELQGVSLVLLPVMKVLGQLKDQIKGIAPEVAIALDSITSNVNSIAIETGALSERTVVP TVVDEEAQKILNETKKMAEEKLKEILPELPYPPSDTPSYKRQVIEIKQEQTQQKRKVTADDLLEYIRQTGGFLDLEHFSK IYNVDKQEVLDLLKSLASKGLITLEE
Sequences:
>Translated_266_residues MLDKISSFFNNDRKRKAQLGKIITEISLKLKDQQDRLDEAIRRLRDRDKELYEKVIRAQIEGDMAKATIYAQEISDIRKM IKIIYTAFLAIEKVRIKLDTVQELQGVSLVLLPVMKVLGQLKDQIKGIAPEVAIALDSITSNVNSIAIETGALSERTVVP TVVDEEAQKILNETKKMAEEKLKEILPELPYPPSDTPSYKRQVIEIKQEQTQQKRKVTADDLLEYIRQTGGFLDLEHFSK IYNVDKQEVLDLLKSLASKGLITLEE >Mature_266_residues MLDKISSFFNNDRKRKAQLGKIITEISLKLKDQQDRLDEAIRRLRDRDKELYEKVIRAQIEGDMAKATIYAQEISDIRKM IKIIYTAFLAIEKVRIKLDTVQELQGVSLVLLPVMKVLGQLKDQIKGIAPEVAIALDSITSNVNSIAIETGALSERTVVP TVVDEEAQKILNETKKMAEEKLKEILPELPYPPSDTPSYKRQVIEIKQEQTQQKRKVTADDLLEYIRQTGGFLDLEHFSK IYNVDKQEVLDLLKSLASKGLITLEE
Specific function: Unknown
COG id: COG5491
COG function: function code N; Conserved protein implicated in secretion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30366; Mature: 30366
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKISSFFNNDRKRKAQLGKIITEISLKLKDQQDRLDEAIRRLRDRDKELYEKVIRAQI CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGDMAKATIYAQEISDIRKMIKIIYTAFLAIEKVRIKLDTVQELQGVSLVLLPVMKVLGQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LKDQIKGIAPEVAIALDSITSNVNSIAIETGALSERTVVPTVVDEEAQKILNETKKMAEE HHHHHHCCCHHHHHHHHHHHCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KLKEILPELPYPPSDTPSYKRQVIEIKQEQTQQKRKVTADDLLEYIRQTGGFLDLEHFSK HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHH IYNVDKQEVLDLLKSLASKGLITLEE HHCCCHHHHHHHHHHHHHCCCEEECC >Mature Secondary Structure MLDKISSFFNNDRKRKAQLGKIITEISLKLKDQQDRLDEAIRRLRDRDKELYEKVIRAQI CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGDMAKATIYAQEISDIRKMIKIIYTAFLAIEKVRIKLDTVQELQGVSLVLLPVMKVLGQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LKDQIKGIAPEVAIALDSITSNVNSIAIETGALSERTVVPTVVDEEAQKILNETKKMAEE HHHHHHCCCHHHHHHHHHHHCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KLKEILPELPYPPSDTPSYKRQVIEIKQEQTQQKRKVTADDLLEYIRQTGGFLDLEHFSK HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHH IYNVDKQEVLDLLKSLASKGLITLEE HHCCCHHHHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA