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The map label for this gene is 15921398

Identifier: 15921398

GI number: 15921398

Start: 1136708

End: 1137085

Strand: Direct

Name: 15921398

Synonym: ST1141

Alternate gene names: NA

Gene position: 1136708-1137085 (Clockwise)

Preceding gene: 15921388

Following gene: 15921399

Centisome position: 42.18

GC content: 32.54

Gene sequence:

>378_bases
ATGGGTAGTTATGATGATGTAAGTAGACTATTGAGGAGAGCTGAAAAGTTTAGGAAAGATGCTATTAATGCTTATAATGA
GGGATATTACGACATATCTTGTTTTTATGCAGAACAAGCTGTACAGCTTAGAATTAAAGCGTATATGCTGAGGAATCTTG
GATTTATACCCAGAATTCATGGAATAAGAGATTTGCTTTCAATTATCTACAAATATACACGGGATAAAAAGATAATGGAA
TTTATAAGCGAAAATAGAGATTTGCTGAAGGAATTAGAAGAGGGGTACACTGAGACTAGATATGGTTCGATAGATTATAC
CGAGGAAGATGCTAAAGAGTGTTTAAATATAATGGAGAAGCTATTTAACTTAATATGA

Upstream 100 bases:

>100_bases
TAAGATTAATTCTATATTGATTGATCCAATTTTGAATAAAACAGAAAAGAATCGCATAAAATAATAAAACTTTTTTACAC
CTTTTACTGATTCAATAACA

Downstream 100 bases:

>100_bases
AGCTTGAGCCATACATTGAATTTGTTAAGGAAAAGATGTATATCCTTTCTAATTTCCCCCAAATATCTCCAGTAATATAT
GAGGCTATTAGAAAGTCACT

Product: hypothetical protein

Products: NA

Alternate protein names: HEPN Domain-Containing Protein

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MGSYDDVSRLLRRAEKFRKDAINAYNEGYYDISCFYAEQAVQLRIKAYMLRNLGFIPRIHGIRDLLSIIYKYTRDKKIME
FISENRDLLKELEEGYTETRYGSIDYTEEDAKECLNIMEKLFNLI

Sequences:

>Translated_125_residues
MGSYDDVSRLLRRAEKFRKDAINAYNEGYYDISCFYAEQAVQLRIKAYMLRNLGFIPRIHGIRDLLSIIYKYTRDKKIME
FISENRDLLKELEEGYTETRYGSIDYTEEDAKECLNIMEKLFNLI
>Mature_124_residues
GSYDDVSRLLRRAEKFRKDAINAYNEGYYDISCFYAEQAVQLRIKAYMLRNLGFIPRIHGIRDLLSIIYKYTRDKKIMEF
ISENRDLLKELEEGYTETRYGSIDYTEEDAKECLNIMEKLFNLI

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14948; Mature: 14817

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSYDDVSRLLRRAEKFRKDAINAYNEGYYDISCFYAEQAVQLRIKAYMLRNLGFIPRIH
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GIRDLLSIIYKYTRDKKIMEFISENRDLLKELEEGYTETRYGSIDYTEEDAKECLNIMEK
HHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHH
LFNLI
HHHHC
>Mature Secondary Structure 
GSYDDVSRLLRRAEKFRKDAINAYNEGYYDISCFYAEQAVQLRIKAYMLRNLGFIPRIH
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GIRDLLSIIYKYTRDKKIMEFISENRDLLKELEEGYTETRYGSIDYTEEDAKECLNIMEK
HHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHH
LFNLI
HHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA