Click here to switch to the map view.

The map label for this gene is ybjQ [C]

Identifier: 15921333

GI number: 15921333

Start: 1064810

End: 1065154

Strand: Direct

Name: ybjQ [C]

Synonym: ST1080

Alternate gene names: 15921333

Gene position: 1064810-1065154 (Clockwise)

Preceding gene: 15921332

Following gene: 15921334

Centisome position: 39.51

GC content: 37.1

Gene sequence:

>345_bases
ATGAGTTTCAGAGAAAGTGATATTCTGATTACCACTGCCCAAGAGCTACCTGGATACAAGATAGTTGAAGTTAAAGGAGT
TGTAATTGGAATAACGGTAAGATCTAGAGGTCTGGGAGGTAATATAGCAGCTTCTTTTAGAAGTTTAATTGGAGGAGAGA
TTAAAGAGTATGTGGAAATGGCTGAACAAGCGAGAATGCAAGCTTTAGAAAGAATGATTGAAAGAGCTAAAGCACTAGGA
GCAAACGCTGTAATTAGCGTTAGGTTCGATTCTAATGAATTGGCTCAAAATATGGATGAGATAATAGCATATGGTACCGC
TGTTGTTGTTACAAAAAGTATTTAG

Upstream 100 bases:

>100_bases
CATATAATTGAGGAATCACAAAAACAGAAATCTATCTAATATAACATATTAATCTTCTATCTTAGTAAACTTTAAATTCA
TATAGATATTTATAATATTT

Downstream 100 bases:

>100_bases
TTACTTTCAGATATAGATTTAAATCATAACATATACGTACAACTCTTTAAGCTTTCAAATATTGTGAAATGGTCTATTAT
ATTAACCTAGAGTGAATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSFRESDILITTAQELPGYKIVEVKGVVIGITVRSRGLGGNIAASFRSLIGGEIKEYVEMAEQARMQALERMIERAKALG
ANAVISVRFDSNELAQNMDEIIAYGTAVVVTKSI

Sequences:

>Translated_114_residues
MSFRESDILITTAQELPGYKIVEVKGVVIGITVRSRGLGGNIAASFRSLIGGEIKEYVEMAEQARMQALERMIERAKALG
ANAVISVRFDSNELAQNMDEIIAYGTAVVVTKSI
>Mature_113_residues
SFRESDILITTAQELPGYKIVEVKGVVIGITVRSRGLGGNIAASFRSLIGGEIKEYVEMAEQARMQALERMIERAKALGA
NAVISVRFDSNELAQNMDEIIAYGTAVVVTKSI

Specific function: Unknown

COG id: COG0393

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0145 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1080_SULTO (Q972Q3)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_377002.1
- ProteinModelPortal:   Q972Q3
- SMR:   Q972Q3
- GeneID:   1459065
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST1080
- NMPDR:   fig|273063.1.peg.1170
- HOGENOM:   HBG339160
- OMA:   YGTAVRL
- ProtClustDB:   PRK01217
- BioCyc:   STOK273063:ST1080-MONOMER
- HAMAP:   MF_00338
- InterPro:   IPR002765
- Gene3D:   G3DSA:3.30.110.70

Pfam domain/function: PF01906 DUF74

EC number: NA

Molecular weight: Translated: 12378; Mature: 12246

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRESDILITTAQELPGYKIVEVKGVVIGITVRSRGLGGNIAASFRSLIGGEIKEYVEM
CCCCCCCEEEEEHHHCCCEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHCHHHHHHHHH
AEQARMQALERMIERAKALGANAVISVRFDSNELAQNMDEIIAYGTAVVVTKSI
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure 
SFRESDILITTAQELPGYKIVEVKGVVIGITVRSRGLGGNIAASFRSLIGGEIKEYVEM
CCCCCCEEEEEHHHCCCEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHCHHHHHHHHH
AEQARMQALERMIERAKALGANAVISVRFDSNELAQNMDEIIAYGTAVVVTKSI
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479