Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
---|---|
Accession | NC_003106 |
Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15920318
Identifier: 15920318
GI number: 15920318
Start: 159783
End: 162086
Strand: Reverse
Name: 15920318
Synonym: ST0140
Alternate gene names: NA
Gene position: 162086-159783 (Counterclockwise)
Preceding gene: 15920319
Following gene: 15920317
Centisome position: 6.01
GC content: 34.33
Gene sequence:
>2304_bases ATGAGTATAAACAAATACAGACTATTACTTCCTTTTTTAGGTGGACTTTTATCTACGCTCTTTGTTCTTAGATCTACATT ATTTTCCCCCGGTCTAGTTTATGTAAGGGATTCTTATCCTTCAATTATAGGTTCTTTTCCTACTTTGGTTAATAACGGCC AGATTAATCTGCTTTTTATTATGGATACCTCTGATCTTCCAATTTACATATTTTCTCTATGGCCAGAGATATGGGATAAA CTAAGTTATGCATATCCAATCTTCTTAGGTTTCGTTTCCATGTATTTTGCATCTTATTATATTCTCCGAATTAGGTATAA GGAGATAATATCTCTGATAGTGGCTTTTTTATACGTAACTTCACCAGCTTTCATGTACTTCACTTACTGGACTAATTACT CTACTTTCGTTGCCTTATATCCCTTATTTTTAGTAGGTCTAGACTATGTGAACAGAAACTTCTCTCTCCTTCGTAGTAGT ATTATTCTCTCCTTGTTACTAACGCTAACAACTACAGATCCAAGAGGTTTTATTTTCTCTTTTTTCACTCTTTTTCTTTA CGTCATATACAGAGTAATTAAGAAGGATTTCCATTTCCTAAAAATTGCACTTCTTTCTCTACCATTCTATCTCATGGAAA ATATAAGGACTTTCTATTCCTTACTTGTTCAACACACTGTTTACGTTTCTGTAGGTTCTTCAATTTCCGTAGAACAGCTA TGGCTAAACTATTATACATTCTCACTCTCAGATAATTTAAGAGGAATAGGATTATTTGCTCCTTTAATAAACTTTTACGC TGGGAACGTTCTCTTTTCTTACATTTTCTCTTTCTTTTTACCAGTTTTCGTTATTCTATCTTTTTTCTACTTGTTCTTTA AAATCATACATACAGATGCTATTTTCTATTTCTTTCTATATTCTTTCTTAGTAATTTTTATGTCTTCTTATGTAGTAGTA TTTAATCATGTTTTTAACATTAACCTGATTTATTATCTGAATAATTGGCTAAAGGACACTCCACTATTCCCTTATATGTG GGTTATTCTCCCAACTTATTTAAGTGAGATGATTATAGCCCCTTTATTTCTTACCTTTGTTTACGAAATAAATTTTCTTT TGGCTGAAAAAGGGGAAGTTCAAAGGCTAATTTCCGTAATTATCTTAGTAATGGTAGTTTCAGCTCAGCTAGTCTTTTCC TACCCGTCTTTTGCTACCGGTAACTACGAGTATAATTACATACCTTTGTCTGTACCAGGAAACTTGATCCAAGCCGCTGA GTACTTACACGGTGCTAAAGTAGCAGTTTACGGTACCACAATCTACTATCATGGTAAATACTATGATCCAGAAGTCTTTA CAGGTGTTCCTAATTCTGTTTTCCTTCCTTTCTTTAATACTACTCACCTAGGTACTATTCTCGAATATTACGGTGTAGAG TATGTGTTAGCTAACGAGAATCTCTCCTATTTCCTCTCCCAGAAAGACCTTGAGCTTGTTAAGAATTTCAGCGGTATATA CGTTTTTAAGAACCTTGATTATAAATCGACTTTTTCCTCAAGAGGTATTTATCTTGTCTACAACGTGAATAATTTAAATG AAGATGTTGCTGCTGTTCCCTATTACTTTTATGTACCTCCAGAATATTTAGCTGGAATTATTGGTGGTAATGAGATATAT ATTAGGGCGGATGTGTTTCATAATTATAGTGTTAAGATTCCTGCTCAACGCTTGCCCTACCCTACTAATTTTTCATGCAC AATTTACGTTAACGCTCACACTCTGCAAATTCTCTCTTCTCTCCCTGGTATTTCACTAATTCAGGTTGGGAATCCTGCAA GCGAGAATGTTTCGGTTACTCCGGGTAAATATGCCGTCCTACTGACTTATGTTTCTTATCCAGAAGGAGGTGTTATTGAA ATTTCTAATGGCAGTGTTTCTCTAAAAGTAAATACTGCCAATAATACTCTTTCTGTTGTTTCCTCATATCTGGGTGTTAT TTCTACTGAGGAGGGGAAAATAGAGCTTATCCACCCGGGTAATAGGATAACCTATATTGTTAACCTTGAACTTATTCCTT ACTCTTTGTGGAATGATACTATTATCACTCTTCATCCTAAGAATGTGACTGTTGTTTCCTATCCTGTTGTTGGTGATGCT ATATCCAGCGTTGGTTATAATATTATTCTAGGTAAGGCTGAAATACCTCCAAGCTATCACTTAGTCCCGGTTATTATTCT CAACGTCATTTTCTACGCTTTGATTTTATTTCTATTATTAAGGAGAAAGAGGAGCAATAGTTAA
Upstream 100 bases:
>100_bases TGCAAGTCTCAGTAATAGCACAATAAATTTAACTACTTTTTTCTATTTCTTTTTATTCTCTCTTGATTAAATTTTTAAAT TTATAACATACTTTATTTTG
Downstream 100 bases:
>100_bases CGTTTTTTATTTTTCTCCTTTTCATATTTCTATGAATAAGAAAAAGGTTATTTCTATCGTTAATTTAATAACTTCAATGT CCTTACTTACTTTTGTTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 767; Mature: 766
Protein sequence:
>767_residues MSINKYRLLLPFLGGLLSTLFVLRSTLFSPGLVYVRDSYPSIIGSFPTLVNNGQINLLFIMDTSDLPIYIFSLWPEIWDK LSYAYPIFLGFVSMYFASYYILRIRYKEIISLIVAFLYVTSPAFMYFTYWTNYSTFVALYPLFLVGLDYVNRNFSLLRSS IILSLLLTLTTTDPRGFIFSFFTLFLYVIYRVIKKDFHFLKIALLSLPFYLMENIRTFYSLLVQHTVYVSVGSSISVEQL WLNYYTFSLSDNLRGIGLFAPLINFYAGNVLFSYIFSFFLPVFVILSFFYLFFKIIHTDAIFYFFLYSFLVIFMSSYVVV FNHVFNINLIYYLNNWLKDTPLFPYMWVILPTYLSEMIIAPLFLTFVYEINFLLAEKGEVQRLISVIILVMVVSAQLVFS YPSFATGNYEYNYIPLSVPGNLIQAAEYLHGAKVAVYGTTIYYHGKYYDPEVFTGVPNSVFLPFFNTTHLGTILEYYGVE YVLANENLSYFLSQKDLELVKNFSGIYVFKNLDYKSTFSSRGIYLVYNVNNLNEDVAAVPYYFYVPPEYLAGIIGGNEIY IRADVFHNYSVKIPAQRLPYPTNFSCTIYVNAHTLQILSSLPGISLIQVGNPASENVSVTPGKYAVLLTYVSYPEGGVIE ISNGSVSLKVNTANNTLSVVSSYLGVISTEEGKIELIHPGNRITYIVNLELIPYSLWNDTIITLHPKNVTVVSYPVVGDA ISSVGYNIILGKAEIPPSYHLVPVIILNVIFYALILFLLLRRKRSNS
Sequences:
>Translated_767_residues MSINKYRLLLPFLGGLLSTLFVLRSTLFSPGLVYVRDSYPSIIGSFPTLVNNGQINLLFIMDTSDLPIYIFSLWPEIWDK LSYAYPIFLGFVSMYFASYYILRIRYKEIISLIVAFLYVTSPAFMYFTYWTNYSTFVALYPLFLVGLDYVNRNFSLLRSS IILSLLLTLTTTDPRGFIFSFFTLFLYVIYRVIKKDFHFLKIALLSLPFYLMENIRTFYSLLVQHTVYVSVGSSISVEQL WLNYYTFSLSDNLRGIGLFAPLINFYAGNVLFSYIFSFFLPVFVILSFFYLFFKIIHTDAIFYFFLYSFLVIFMSSYVVV FNHVFNINLIYYLNNWLKDTPLFPYMWVILPTYLSEMIIAPLFLTFVYEINFLLAEKGEVQRLISVIILVMVVSAQLVFS YPSFATGNYEYNYIPLSVPGNLIQAAEYLHGAKVAVYGTTIYYHGKYYDPEVFTGVPNSVFLPFFNTTHLGTILEYYGVE YVLANENLSYFLSQKDLELVKNFSGIYVFKNLDYKSTFSSRGIYLVYNVNNLNEDVAAVPYYFYVPPEYLAGIIGGNEIY IRADVFHNYSVKIPAQRLPYPTNFSCTIYVNAHTLQILSSLPGISLIQVGNPASENVSVTPGKYAVLLTYVSYPEGGVIE ISNGSVSLKVNTANNTLSVVSSYLGVISTEEGKIELIHPGNRITYIVNLELIPYSLWNDTIITLHPKNVTVVSYPVVGDA ISSVGYNIILGKAEIPPSYHLVPVIILNVIFYALILFLLLRRKRSNS >Mature_766_residues SINKYRLLLPFLGGLLSTLFVLRSTLFSPGLVYVRDSYPSIIGSFPTLVNNGQINLLFIMDTSDLPIYIFSLWPEIWDKL SYAYPIFLGFVSMYFASYYILRIRYKEIISLIVAFLYVTSPAFMYFTYWTNYSTFVALYPLFLVGLDYVNRNFSLLRSSI ILSLLLTLTTTDPRGFIFSFFTLFLYVIYRVIKKDFHFLKIALLSLPFYLMENIRTFYSLLVQHTVYVSVGSSISVEQLW LNYYTFSLSDNLRGIGLFAPLINFYAGNVLFSYIFSFFLPVFVILSFFYLFFKIIHTDAIFYFFLYSFLVIFMSSYVVVF NHVFNINLIYYLNNWLKDTPLFPYMWVILPTYLSEMIIAPLFLTFVYEINFLLAEKGEVQRLISVIILVMVVSAQLVFSY PSFATGNYEYNYIPLSVPGNLIQAAEYLHGAKVAVYGTTIYYHGKYYDPEVFTGVPNSVFLPFFNTTHLGTILEYYGVEY VLANENLSYFLSQKDLELVKNFSGIYVFKNLDYKSTFSSRGIYLVYNVNNLNEDVAAVPYYFYVPPEYLAGIIGGNEIYI RADVFHNYSVKIPAQRLPYPTNFSCTIYVNAHTLQILSSLPGISLIQVGNPASENVSVTPGKYAVLLTYVSYPEGGVIEI SNGSVSLKVNTANNTLSVVSSYLGVISTEEGKIELIHPGNRITYIVNLELIPYSLWNDTIITLHPKNVTVVSYPVVGDAI SSVGYNIILGKAEIPPSYHLVPVIILNVIFYALILFLLLRRKRSNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87837; Mature: 87705
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINKYRLLLPFLGGLLSTLFVLRSTLFSPGLVYVRDSYPSIIGSFPTLVNNGQINLLFI CCCCHHEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCHHCCCCCEEEEEE MDTSDLPIYIFSLWPEIWDKLSYAYPIFLGFVSMYFASYYILRIRYKEIISLIVAFLYVT EECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHH SPAFMYFTYWTNYSTFVALYPLFLVGLDYVNRNFSLLRSSIILSLLLTLTTTDPRGFIFS CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH FFTLFLYVIYRVIKKDFHFLKIALLSLPFYLMENIRTFYSLLVQHTVYVSVGSSISVEQL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHE WLNYYTFSLSDNLRGIGLFAPLINFYAGNVLFSYIFSFFLPVFVILSFFYLFFKIIHTDA EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFYFFLYSFLVIFMSSYVVVFNHVFNINLIYYLNNWLKDTPLFPYMWVILPTYLSEMIIA HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHH PLFLTFVYEINFLLAEKGEVQRLISVIILVMVVSAQLVFSYPSFATGNYEYNYIPLSVPG HHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCC NLIQAAEYLHGAKVAVYGTTIYYHGKYYDPEVFTGVPNSVFLPFFNTTHLGTILEYYGVE HHHHHHHHHCCCEEEEEEEEEEECCEEECCHHCCCCCCCEEEECCCCHHHHHHHHHHCEE YVLANENLSYFLSQKDLELVKNFSGIYVFKNLDYKSTFSSRGIYLVYNVNNLNEDVAAVP EEEECCCCEEEECHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHCC YYFYVPPEYLAGIIGGNEIYIRADVFHNYSVKIPAQRLPYPTNFSCTIYVNAHTLQILSS EEEECCHHHHHHHCCCCEEEEEEEEEECEEEECCHHHCCCCCCCEEEEEEEHHHHHHHHH LPGISLIQVGNPASENVSVTPGKYAVLLTYVSYPEGGVIEISNGSVSLKVNTANNTLSVV CCCCEEEEECCCCCCCEEECCCCEEEEEEEEECCCCCEEEEECCEEEEEEECCCCHHHHH SSYLGVISTEEGKIELIHPGNRITYIVNLELIPYSLWNDTIITLHPKNVTVVSYPVVGDA HHHHCCEECCCCCEEEECCCCEEEEEEEEEEEEEECCCCEEEEECCCCEEEEEECCHHHH ISSVGYNIILGKAEIPPSYHLVPVIILNVIFYALILFLLLRRKRSNS HHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SINKYRLLLPFLGGLLSTLFVLRSTLFSPGLVYVRDSYPSIIGSFPTLVNNGQINLLFI CCCHHEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCHHCCCCCEEEEEE MDTSDLPIYIFSLWPEIWDKLSYAYPIFLGFVSMYFASYYILRIRYKEIISLIVAFLYVT EECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHH SPAFMYFTYWTNYSTFVALYPLFLVGLDYVNRNFSLLRSSIILSLLLTLTTTDPRGFIFS CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH FFTLFLYVIYRVIKKDFHFLKIALLSLPFYLMENIRTFYSLLVQHTVYVSVGSSISVEQL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHE WLNYYTFSLSDNLRGIGLFAPLINFYAGNVLFSYIFSFFLPVFVILSFFYLFFKIIHTDA EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFYFFLYSFLVIFMSSYVVVFNHVFNINLIYYLNNWLKDTPLFPYMWVILPTYLSEMIIA HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHH PLFLTFVYEINFLLAEKGEVQRLISVIILVMVVSAQLVFSYPSFATGNYEYNYIPLSVPG HHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCC NLIQAAEYLHGAKVAVYGTTIYYHGKYYDPEVFTGVPNSVFLPFFNTTHLGTILEYYGVE HHHHHHHHHCCCEEEEEEEEEEECCEEECCHHCCCCCCCEEEECCCCHHHHHHHHHHCEE YVLANENLSYFLSQKDLELVKNFSGIYVFKNLDYKSTFSSRGIYLVYNVNNLNEDVAAVP EEEECCCCEEEECHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHCC YYFYVPPEYLAGIIGGNEIYIRADVFHNYSVKIPAQRLPYPTNFSCTIYVNAHTLQILSS EEEECCHHHHHHHCCCCEEEEEEEEEECEEEECCHHHCCCCCCCEEEEEEEHHHHHHHHH LPGISLIQVGNPASENVSVTPGKYAVLLTYVSYPEGGVIEISNGSVSLKVNTANNTLSVV CCCCEEEEECCCCCCCEEECCCCEEEEEEEEECCCCCEEEEECCEEEEEEECCCCHHHHH SSYLGVISTEEGKIELIHPGNRITYIVNLELIPYSLWNDTIITLHPKNVTVVSYPVVGDA HHHHCCEECCCCCEEEECCCCEEEEEEEEEEEEEECCCCEEEEECCCCEEEEEECCHHHH ISSVGYNIILGKAEIPPSYHLVPVIILNVIFYALILFLLLRRKRSNS HHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA