Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
---|---|
Accession | NC_003106 |
Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15920312
Identifier: 15920312
GI number: 15920312
Start: 153460
End: 154443
Strand: Reverse
Name: 15920312
Synonym: ST0134
Alternate gene names: NA
Gene position: 154443-153460 (Counterclockwise)
Preceding gene: 15920317
Following gene: 15920311
Centisome position: 5.73
GC content: 37.09
Gene sequence:
>984_bases ATGAAGGACAAAATCATTATAAAAAGAGACGACTTTATATTTGCTAAGAAACTTTTATGGAAAATGAGGAGTAAAAACTC AAGGTTTGATACTAAAGAATTTATAAATAAAGGGAGGGACTACCTATATAATTATGCTGAACAGAATGTTGGTCCCCTAG ATCCTTCAAAGAGAGCTTTTCTTAAAGGCTTACTTATTGGTATTGGTGTTTTTGCTGTGGCTTCTGCGATTCCATTAATC AATTCTCTTAATCCACAAGAAATATACTTAAAGACTTTTCCATGGATGATTATTGTGGATTCTAACGGAAATCCAATAGA AGCATCTAAGATACCAGTTAATGACCCAGCAATCTTGCTTTTTGAATACCCCATGTTAGGTGATATAACTTTTCTAATTA ACATGGGCGATGAAAACAATAATCCTGTAGCGGTACCTCCAACAGAAGTTCTTATTCCAGAGACTGGCAAGACTTATCAT TTTCCTGGTGGAGTAGGGCCCTATAAGTCAATAGTTGCATATAGTGCAATTTGCCAACATTTAGGATGTGTACCACCAGA AATACACTTTTACCCACCACAGTACTTTAAAGTTGGTGGTACAACTCCAAATTATATTCCGCCAGATGCTTATCAAGCTG CACAGGCTGCTAAGGCTATAAGTATCATACATTGTGATTGCCACGGTTCAACTTATGACCCATGGCATGGAGCAGCTGTA CTTACTGGACCTACAGTAAGACCACTTCCTTATGTGCAACTATACTGGGACTCAAACACTGATTACTTATATGCTGTTGG AATGAATCTTAATGCACCGCCCATTATGGATCATTCATCCGATTTAGAAGGAGTAGCTTATCTAGATGGATACGATGAAG AAACTGGTTGTCCCAAATTATTATTAAAGAAAGGCCAAGCTGTAACAAATTGTTACACTACTTTGGAAGATTTTGGTAAT ACTTTCCAAGGTGGTTCATCATGA
Upstream 100 bases:
>100_bases TTAGTTAAAAAGAATATTCGAATAGTTAATAAAAATTTAAAAAATTGTATATGAGTAAAGTTTTTATATATGCAAAAATA ACTCAAAACATGTAGAGAGT
Downstream 100 bases:
>100_bases GCAGATTAGGTTTGGCTATAGTTTTATTAATATTCGGTGCAACTGCAGCAATGATAGGTTTTTTAGTTTATACGATTTTG TGGGACTCTTCACCCATTAG
Product: Rieske iron-sulfur protein
Products: NA
Alternate protein names: Rieske Domain-Containing Protein; Rieske Fe-S Protein; Rieske-I Iron Sulfur Protein; Rieske Domain Protein; Rieske Iron-Sulfur Protein SoxF Related Protein; Rieske Iron-Sulfur Domain-Containing Protein; Rieske Iron-Sulphur Domain Protein; Sulfur Oxidation Protein Rieske-I Iron Sulfur Protein SoxL; Rieske Iron-Sulfur
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MKDKIIIKRDDFIFAKKLLWKMRSKNSRFDTKEFINKGRDYLYNYAEQNVGPLDPSKRAFLKGLLIGIGVFAVASAIPLI NSLNPQEIYLKTFPWMIIVDSNGNPIEASKIPVNDPAILLFEYPMLGDITFLINMGDENNNPVAVPPTEVLIPETGKTYH FPGGVGPYKSIVAYSAICQHLGCVPPEIHFYPPQYFKVGGTTPNYIPPDAYQAAQAAKAISIIHCDCHGSTYDPWHGAAV LTGPTVRPLPYVQLYWDSNTDYLYAVGMNLNAPPIMDHSSDLEGVAYLDGYDEETGCPKLLLKKGQAVTNCYTTLEDFGN TFQGGSS
Sequences:
>Translated_327_residues MKDKIIIKRDDFIFAKKLLWKMRSKNSRFDTKEFINKGRDYLYNYAEQNVGPLDPSKRAFLKGLLIGIGVFAVASAIPLI NSLNPQEIYLKTFPWMIIVDSNGNPIEASKIPVNDPAILLFEYPMLGDITFLINMGDENNNPVAVPPTEVLIPETGKTYH FPGGVGPYKSIVAYSAICQHLGCVPPEIHFYPPQYFKVGGTTPNYIPPDAYQAAQAAKAISIIHCDCHGSTYDPWHGAAV LTGPTVRPLPYVQLYWDSNTDYLYAVGMNLNAPPIMDHSSDLEGVAYLDGYDEETGCPKLLLKKGQAVTNCYTTLEDFGN TFQGGSS >Mature_327_residues MKDKIIIKRDDFIFAKKLLWKMRSKNSRFDTKEFINKGRDYLYNYAEQNVGPLDPSKRAFLKGLLIGIGVFAVASAIPLI NSLNPQEIYLKTFPWMIIVDSNGNPIEASKIPVNDPAILLFEYPMLGDITFLINMGDENNNPVAVPPTEVLIPETGKTYH FPGGVGPYKSIVAYSAICQHLGCVPPEIHFYPPQYFKVGGTTPNYIPPDAYQAAQAAKAISIIHCDCHGSTYDPWHGAAV LTGPTVRPLPYVQLYWDSNTDYLYAVGMNLNAPPIMDHSSDLEGVAYLDGYDEETGCPKLLLKKGQAVTNCYTTLEDFGN TFQGGSS
Specific function: Unknown
COG id: COG0723
COG function: function code C; Rieske Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36215; Mature: 36215
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDKIIIKRDDFIFAKKLLWKMRSKNSRFDTKEFINKGRDYLYNYAEQNVGPLDPSKRAF CCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCHHHHH LKGLLIGIGVFAVASAIPLINSLNPQEIYLKTFPWMIIVDSNGNPIEASKIPVNDPAILL HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCEEECCCCCCCCCEEEE FEYPMLGDITFLINMGDENNNPVAVPPTEVLIPETGKTYHFPGGVGPYKSIVAYSAICQH EECCCCCCEEEEEEECCCCCCCEEECCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHH LGCVPPEIHFYPPQYFKVGGTTPNYIPPDAYQAAQAAKAISIIHCDCHGSTYDPWHGAAV HCCCCCCEEECCCCEEECCCCCCCCCCCHHHHHHHHHCEEEEEEEECCCCCCCCCCCEEE LTGPTVRPLPYVQLYWDSNTDYLYAVGMNLNAPPIMDHSSDLEGVAYLDGYDEETGCPKL EECCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHH LLKKGQAVTNCYTTLEDFGNTFQGGSS HHHCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKDKIIIKRDDFIFAKKLLWKMRSKNSRFDTKEFINKGRDYLYNYAEQNVGPLDPSKRAF CCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCHHHHH LKGLLIGIGVFAVASAIPLINSLNPQEIYLKTFPWMIIVDSNGNPIEASKIPVNDPAILL HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCEEECCCCCCCCCEEEE FEYPMLGDITFLINMGDENNNPVAVPPTEVLIPETGKTYHFPGGVGPYKSIVAYSAICQH EECCCCCCEEEEEEECCCCCCCEEECCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHH LGCVPPEIHFYPPQYFKVGGTTPNYIPPDAYQAAQAAKAISIIHCDCHGSTYDPWHGAAV HCCCCCCEEECCCCEEECCCCCCCCCCCHHHHHHHHHCEEEEEEEECCCCCCCCCCCEEE LTGPTVRPLPYVQLYWDSNTDYLYAVGMNLNAPPIMDHSSDLEGVAYLDGYDEETGCPKL EECCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHH LLKKGQAVTNCYTTLEDFGNTFQGGSS HHHCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA