| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920221
Identifier: 15920221
GI number: 15920221
Start: 59664
End: 60377
Strand: Reverse
Name: 15920221
Synonym: ST0044
Alternate gene names: NA
Gene position: 60377-59664 (Counterclockwise)
Preceding gene: 15920222
Following gene: 15920220
Centisome position: 2.24
GC content: 38.38
Gene sequence:
>714_bases ATGGATTATAATACCTTCAAATATTACGGATCAAAGAAAATGATCGAAGACGTATTTCTTAACGGTTACGTAGATATAGG AATTACCCAACCCCAATACCTATTATACTTCTATCGCACACCTTTTGGAAACACTGAAGAATTCGGTAAACTAGTTTATG AAAATCCCTACAGATTTATAATAGGTACCAGATGGGATCCCAGAGATGGTGAACAAGGTAAAAGACAACTAGAAGAAGAC GTTAGAAAATATAGGGTCAAACCCTGGCAAATGCGTCATGTGAAACTATACACTGCAGAATGGAAAGATATTGGAGGAAA TTTATCAAGAGGATGGAGACTGGATTCAAGAGAAGCATTTGAATTCATAGAATTTAGCAAATCATTAGGAATAAACATCT TAGTCCCGCATAAGGGACCAACAGTATGGCCCTTAGATAAGGACGCATTCGATGTAAAAGACGTAGATGCTGCAGCCACA TCATTCCCAGAAATGAAATTTGTAGTAACACATATAGGATTACCAAGGTTTGATGATTTCTGCTGGATAGGAGTTCAAGA CAAAAACGTTTATGCTGGATTAGCAGTAGCTACAGCATTTATACATAAGAGACCAAGATACTTTGCACAAATAATGGCCG AACTACTATTCTGGCCTGGACCAGATAGAATCCTATACGGATCTGACAAAACGCGGGGCAGCCTCGCCTTTTAA
Upstream 100 bases:
>100_bases GAAAGCCCATGAGGATAATTGGTTAAGACCAGAATTGGCTAAAGGATGGATAGATTGCTTTTACGACTATCACAAATCGT TAAGTCCCCAAGAATATATA
Downstream 100 bases:
>100_bases GGCGGGGTAAAGTTTAAAAATTATTTTGAATACTTTAAAGTGTGGAATACAAATCAACTAGGCATGCAAAGTACCTCTGC AACTACCACTTCGTATGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MDYNTFKYYGSKKMIEDVFLNGYVDIGITQPQYLLYFYRTPFGNTEEFGKLVYENPYRFIIGTRWDPRDGEQGKRQLEED VRKYRVKPWQMRHVKLYTAEWKDIGGNLSRGWRLDSREAFEFIEFSKSLGINILVPHKGPTVWPLDKDAFDVKDVDAAAT SFPEMKFVVTHIGLPRFDDFCWIGVQDKNVYAGLAVATAFIHKRPRYFAQIMAELLFWPGPDRILYGSDKTRGSLAF
Sequences:
>Translated_237_residues MDYNTFKYYGSKKMIEDVFLNGYVDIGITQPQYLLYFYRTPFGNTEEFGKLVYENPYRFIIGTRWDPRDGEQGKRQLEED VRKYRVKPWQMRHVKLYTAEWKDIGGNLSRGWRLDSREAFEFIEFSKSLGINILVPHKGPTVWPLDKDAFDVKDVDAAAT SFPEMKFVVTHIGLPRFDDFCWIGVQDKNVYAGLAVATAFIHKRPRYFAQIMAELLFWPGPDRILYGSDKTRGSLAF >Mature_237_residues MDYNTFKYYGSKKMIEDVFLNGYVDIGITQPQYLLYFYRTPFGNTEEFGKLVYENPYRFIIGTRWDPRDGEQGKRQLEED VRKYRVKPWQMRHVKLYTAEWKDIGGNLSRGWRLDSREAFEFIEFSKSLGINILVPHKGPTVWPLDKDAFDVKDVDAAAT SFPEMKFVVTHIGLPRFDDFCWIGVQDKNVYAGLAVATAFIHKRPRYFAQIMAELLFWPGPDRILYGSDKTRGSLAF
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27761; Mature: 27761
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYNTFKYYGSKKMIEDVFLNGYVDIGITQPQYLLYFYRTPFGNTEEFGKLVYENPYRFI CCCCCEEEECCHHHHHHHHHCCEEEEECCCCEEEEEEEECCCCCHHHHHHHEECCCEEEE IGTRWDPRDGEQGKRQLEEDVRKYRVKPWQMRHVKLYTAEWKDIGGNLSRGWRLDSREAF EECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECHHHCCCCCCCCEECCCHHHH EFIEFSKSLGINILVPHKGPTVWPLDKDAFDVKDVDAAATSFPEMKFVVTHIGLPRFDDF HHHHHHHHCCCEEEEECCCCEECCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCE CWIGVQDKNVYAGLAVATAFIHKRPRYFAQIMAELLFWPGPDRILYGSDKTRGSLAF EEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MDYNTFKYYGSKKMIEDVFLNGYVDIGITQPQYLLYFYRTPFGNTEEFGKLVYENPYRFI CCCCCEEEECCHHHHHHHHHCCEEEEECCCCEEEEEEEECCCCCHHHHHHHEECCCEEEE IGTRWDPRDGEQGKRQLEEDVRKYRVKPWQMRHVKLYTAEWKDIGGNLSRGWRLDSREAF EECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECHHHCCCCCCCCEECCCHHHH EFIEFSKSLGINILVPHKGPTVWPLDKDAFDVKDVDAAATSFPEMKFVVTHIGLPRFDDF HHHHHHHHCCCEEEEECCCCEECCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCE CWIGVQDKNVYAGLAVATAFIHKRPRYFAQIMAELLFWPGPDRILYGSDKTRGSLAF EEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA