| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920191
Identifier: 15920191
GI number: 15920191
Start: 24046
End: 25131
Strand: Reverse
Name: 15920191
Synonym: ST0020
Alternate gene names: NA
Gene position: 25131-24046 (Counterclockwise)
Preceding gene: 15920193
Following gene: 15920189
Centisome position: 0.93
GC content: 39.04
Gene sequence:
>1086_bases ATGACGAATAAACTGATAGGCTCAAAAGAAGCCCTAGAACACTTCCAATTTGTTACAATAAATGGCAAGGTAAATTTCGA AGATAAGGAGAGAGTCGTTAGGATTGCCAAGGCCTACTCGCAAGTAGTCAAGAGTACTATTAGGCCATTGTTTGACGGGA AGAGTATAGATGAGTTAACCAAGGAGTTTTACAACCTCTTACCGAATTATCTCGAAACAGCTTTAAAGCAAGCTAAGACA ATTATTGATGGTTTGTTAGAAAGGGAGGAAAATAGGGGTGAGATGATTCACGCAAGGATTAGAAAGTTCTGGTTTGGGAG TAGGGGGAACAAAGCTGATAAGGGTAATAGGAATGTGAAGTTCCACGTTTTAGAAGACCACGTGTTAATTAAGGTTAGAG ACCCGTGGAATAAGGAGTGGATTTTTGGGAAAGCTTATTTTGGTAAGGAGTACTTACCATTGCTTAAGGAGTTGGAGGAT TTATCTCAAAGGAAGGAGGAGGGTTACGGTGCTGTAATTAGTTTTAAGGAAAAGCCCATGATCCACCTCCAAGTACCAGT ATGGTTGTACTTGAAACACTTCTCTTCGCTGAAACCAGCTGGTTATGGTTTGATTGCTGGTTTTGATTTAAATAGTGACA GACTGAACGTTGTTGTAATTAACAAGGATGGTAAAGTTATTACTACTAGAACTTTTTGGTATTCAGATGTTACTAGGCCA GGTTTTCCGAAAGTGAAAGCTAGGGCTTTACGATTAAACGCTTTATCTAACGCTCTGGAGTTCCTCTCAAGGATTGGTGT TGATTATGTTGTATTTGAAGACTTATTCCTAGTTAAGAAAAGGAAGTTCACAAGGAGTAAGAGTGGTAATAGGAAAATAA CGCGTTTCGCTAAGAAGCAGTTACTAACTCATGGTGTTATTAAATCTTTAAGGCTAGGATTTAACGTCGTATTGGTCAAT CCCAAGGGTACTACTAACTCTGAAGAGCATGATAGGGCAATGAGGGAAAAAGGGTTTGACAGACACATAGCCTCGGCCTA TTTAATAGCGTTAAAAGGACTAGGAATGTTGAATGATATCAAATAG
Upstream 100 bases:
>100_bases TACGGGAACAAGAGGTATGGGATAACAATACCTGCAAAGATTAGAGAAAAGGGTGAAAAATTGTACGGCAAAGAGGTGAT AGTAATTGTCATCCTACCAG
Downstream 100 bases:
>100_bases TATAAACTTCACGACTTATCGGAAACTGCTGACAACGGCATAATCGTCATTAAACCCAACTTTTTAATTTAAAGGAAGAT AGGCTACCTCACGAACTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTNKLIGSKEALEHFQFVTINGKVNFEDKERVVRIAKAYSQVVKSTIRPLFDGKSIDELTKEFYNLLPNYLETALKQAKT IIDGLLEREENRGEMIHARIRKFWFGSRGNKADKGNRNVKFHVLEDHVLIKVRDPWNKEWIFGKAYFGKEYLPLLKELED LSQRKEEGYGAVISFKEKPMIHLQVPVWLYLKHFSSLKPAGYGLIAGFDLNSDRLNVVVINKDGKVITTRTFWYSDVTRP GFPKVKARALRLNALSNALEFLSRIGVDYVVFEDLFLVKKRKFTRSKSGNRKITRFAKKQLLTHGVIKSLRLGFNVVLVN PKGTTNSEEHDRAMREKGFDRHIASAYLIALKGLGMLNDIK
Sequences:
>Translated_361_residues MTNKLIGSKEALEHFQFVTINGKVNFEDKERVVRIAKAYSQVVKSTIRPLFDGKSIDELTKEFYNLLPNYLETALKQAKT IIDGLLEREENRGEMIHARIRKFWFGSRGNKADKGNRNVKFHVLEDHVLIKVRDPWNKEWIFGKAYFGKEYLPLLKELED LSQRKEEGYGAVISFKEKPMIHLQVPVWLYLKHFSSLKPAGYGLIAGFDLNSDRLNVVVINKDGKVITTRTFWYSDVTRP GFPKVKARALRLNALSNALEFLSRIGVDYVVFEDLFLVKKRKFTRSKSGNRKITRFAKKQLLTHGVIKSLRLGFNVVLVN PKGTTNSEEHDRAMREKGFDRHIASAYLIALKGLGMLNDIK >Mature_360_residues TNKLIGSKEALEHFQFVTINGKVNFEDKERVVRIAKAYSQVVKSTIRPLFDGKSIDELTKEFYNLLPNYLETALKQAKTI IDGLLEREENRGEMIHARIRKFWFGSRGNKADKGNRNVKFHVLEDHVLIKVRDPWNKEWIFGKAYFGKEYLPLLKELEDL SQRKEEGYGAVISFKEKPMIHLQVPVWLYLKHFSSLKPAGYGLIAGFDLNSDRLNVVVINKDGKVITTRTFWYSDVTRPG FPKVKARALRLNALSNALEFLSRIGVDYVVFEDLFLVKKRKFTRSKSGNRKITRFAKKQLLTHGVIKSLRLGFNVVLVNP KGTTNSEEHDRAMREKGFDRHIASAYLIALKGLGMLNDIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.pernix APE1276 and APE1804 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010094 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41606; Mature: 41475
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKLIGSKEALEHFQFVTINGKVNFEDKERVVRIAKAYSQVVKSTIRPLFDGKSIDELT CCCCCCCCHHHHHCEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KEFYNLLPNYLETALKQAKTIIDGLLEREENRGEMIHARIRKFWFGSRGNKADKGNRNVK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEE FHVLEDHVLIKVRDPWNKEWIFGKAYFGKEYLPLLKELEDLSQRKEEGYGAVISFKEKPM EEEEECEEEEEEECCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCE IHLQVPVWLYLKHFSSLKPAGYGLIAGFDLNSDRLNVVVINKDGKVITTRTFWYSDVTRP EEEECHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCC GFPKVKARALRLNALSNALEFLSRIGVDYVVFEDLFLVKKRKFTRSKSGNRKITRFAKKQ CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LLTHGVIKSLRLGFNVVLVNPKGTTNSEEHDRAMREKGFDRHIASAYLIALKGLGMLNDI HHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHCC K C >Mature Secondary Structure TNKLIGSKEALEHFQFVTINGKVNFEDKERVVRIAKAYSQVVKSTIRPLFDGKSIDELT CCCCCCCHHHHHCEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KEFYNLLPNYLETALKQAKTIIDGLLEREENRGEMIHARIRKFWFGSRGNKADKGNRNVK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEE FHVLEDHVLIKVRDPWNKEWIFGKAYFGKEYLPLLKELEDLSQRKEEGYGAVISFKEKPM EEEEECEEEEEEECCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCE IHLQVPVWLYLKHFSSLKPAGYGLIAGFDLNSDRLNVVVINKDGKVITTRTFWYSDVTRP EEEECHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCC GFPKVKARALRLNALSNALEFLSRIGVDYVVFEDLFLVKKRKFTRSKSGNRKITRFAKKQ CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LLTHGVIKSLRLGFNVVLVNPKGTTNSEEHDRAMREKGFDRHIASAYLIALKGLGMLNDI HHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8899719; 11427726 [H]