| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920176
Identifier: 15920176
GI number: 15920176
Start: 10825
End: 11469
Strand: Reverse
Name: 15920176
Synonym: ST0006
Alternate gene names: NA
Gene position: 11469-10825 (Counterclockwise)
Preceding gene: 15920180
Following gene: 15920175
Centisome position: 0.43
GC content: 36.12
Gene sequence:
>645_bases ATGAGCCTCTACCTTGGCTGTGGAGACTCTCTCTTCAATAGTCTCATATCTCTAAGGAGAGAACGTAATATAAGAGTCGG TATAAACGAAATTTACTATGCCGAAAAAGTACAGATAAAGAATAAGCACCCGCTAAATAATTTATTCGATAAAATACTAC CAGAGTGCCGTAAGAGTACACGATGTCCAGAGTATACCTGGTCAGCTGAAAGTGCAATATTACAAATACTAGAAAGAAAT GGGTATGAAGGGTTAAAGAAGAAGCAGAAGATTATATACAACAATATTCCTTATTGTCCAGATGCAGTAAAAATAAACCC GCCTGACTCAAATAAGCCTAATTACCTTATCGAAGTTAAGTCTACGAAAGCCAAACGTGGGAGTAATACCTATCATTGTT TAGTTAAGAAAGGGGCACTCCAAAGCTTAAGAAACGCTGCTGCATATGTAAAATCAGGTAAAGTTAGGGAAATATTACCT AAACTAGCGATTGGTACTTATGTTATTATAGAGAAAGTGCAAAAGGAAAATGAAAAAGTAGCAATAACTCTACAAGATAT ACAGATATGCGGAATAGGTTGGAAGGGATCATTTAAAATAGATATCCAATCGGCGGACGAAATCTTCAATTTTATAGGGG GTTGA
Upstream 100 bases:
>100_bases ATTCTATAACGATTAATATAAGCTACTTAACAAAGATAATAGACTTCAATAATAGACTACTAACATATATGTATAACTGA AGGTAGGGGGGACTATAAGG
Downstream 100 bases:
>100_bases TGAAACATTTCCTATCTGATAGCTGAAGTTTACGTAGTTCCACAGACAACAACTATAATCCCACCATTTACCTCTAAGGT AGGGAAGTCTTTAATAACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSLYLGCGDSLFNSLISLRRERNIRVGINEIYYAEKVQIKNKHPLNNLFDKILPECRKSTRCPEYTWSAESAILQILERN GYEGLKKKQKIIYNNIPYCPDAVKINPPDSNKPNYLIEVKSTKAKRGSNTYHCLVKKGALQSLRNAAAYVKSGKVREILP KLAIGTYVIIEKVQKENEKVAITLQDIQICGIGWKGSFKIDIQSADEIFNFIGG
Sequences:
>Translated_214_residues MSLYLGCGDSLFNSLISLRRERNIRVGINEIYYAEKVQIKNKHPLNNLFDKILPECRKSTRCPEYTWSAESAILQILERN GYEGLKKKQKIIYNNIPYCPDAVKINPPDSNKPNYLIEVKSTKAKRGSNTYHCLVKKGALQSLRNAAAYVKSGKVREILP KLAIGTYVIIEKVQKENEKVAITLQDIQICGIGWKGSFKIDIQSADEIFNFIGG >Mature_213_residues SLYLGCGDSLFNSLISLRRERNIRVGINEIYYAEKVQIKNKHPLNNLFDKILPECRKSTRCPEYTWSAESAILQILERNG YEGLKKKQKIIYNNIPYCPDAVKINPPDSNKPNYLIEVKSTKAKRGSNTYHCLVKKGALQSLRNAAAYVKSGKVREILPK LAIGTYVIIEKVQKENEKVAITLQDIQICGIGWKGSFKIDIQSADEIFNFIGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24256; Mature: 24125
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLYLGCGDSLFNSLISLRRERNIRVGINEIYYAEKVQIKNKHPLNNLFDKILPECRKST CEEEEECCHHHHHHHHHHHHHCCCEECHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHC RCPEYTWSAESAILQILERNGYEGLKKKQKIIYNNIPYCPDAVKINPPDSNKPNYLIEVK CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEE STKAKRGSNTYHCLVKKGALQSLRNAAAYVKSGKVREILPKLAIGTYVIIEKVQKENEKV CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEE AITLQDIQICGIGWKGSFKIDIQSADEIFNFIGG EEEEEEEEEEEECCCCCEEEEECCHHHHHHHHCC >Mature Secondary Structure SLYLGCGDSLFNSLISLRRERNIRVGINEIYYAEKVQIKNKHPLNNLFDKILPECRKST EEEEECCHHHHHHHHHHHHHCCCEECHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHC RCPEYTWSAESAILQILERNGYEGLKKKQKIIYNNIPYCPDAVKINPPDSNKPNYLIEVK CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEE STKAKRGSNTYHCLVKKGALQSLRNAAAYVKSGKVREILPKLAIGTYVIIEKVQKENEKV CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEE AITLQDIQICGIGWKGSFKIDIQSADEIFNFIGG EEEEEEEEEEEECCCCCEEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA