Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
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Accession | NC_003065 |
Length | 214,233 |
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The map label for this gene is 16119915
Identifier: 16119915
GI number: 16119915
Start: 119927
End: 120328
Strand: Direct
Name: 16119915
Synonym: Atu6100
Alternate gene names: NA
Gene position: 119927-120328 (Clockwise)
Preceding gene: 41223335
Following gene: 16119916
Centisome position: 55.98
GC content: 59.95
Gene sequence:
>402_bases ATGTTCACCTTTTCCGTGACGGACATCCACGTCGTCATGATGCGCGGACGGCTGGACGCCTACCTCAACGGCGGTTTCCG CAATCCCCACTACGGAGTGTTTCCGGGCCGCGATGAGAAGCCCGGTCTTTGGCTAATCGGCGACGAGGGCGTCTACATCC TCTCCAACGGTAAGCTCGCCGTAGGGCAGCGGCCGTTCGTCGTCTATGCCGAAGAGTGCGATCCGAAGACCAACCCTGAC TATTGGCAATACAAGCGCCAGCATTTCGGCGGCGATGACGGGGTCGAGTTTCTCGACGGTGCCATGCTCGTGAAGCTTAT CGCCGCCAGCCCCGGCTGCACGCATCTGAGGATCGCCTTCCACGAGGATTCGATGCAATTCACCGTGATCGCGCGAGATT AG
Upstream 100 bases:
>100_bases TGGAGCTGCTCGACGACCTCACGGATGCGCAGATCGCATCAAAGCTGCCGGTGCATCTGCGCTACCTCCCTGACGCGATA GCGGCGTAAGGGAGGCGGCG
Downstream 100 bases:
>100_bases CGATCCGTCGACGCTCGCTGTCTGGCGGCCGTCCAGCCCACCCAGTCCTCTTCATCCCCGCACGTCGTCAGCCGACTGGA ACCTTCCTTCGGGACGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MFTFSVTDIHVVMMRGRLDAYLNGGFRNPHYGVFPGRDEKPGLWLIGDEGVYILSNGKLAVGQRPFVVYAEECDPKTNPD YWQYKRQHFGGDDGVEFLDGAMLVKLIAASPGCTHLRIAFHEDSMQFTVIARD
Sequences:
>Translated_133_residues MFTFSVTDIHVVMMRGRLDAYLNGGFRNPHYGVFPGRDEKPGLWLIGDEGVYILSNGKLAVGQRPFVVYAEECDPKTNPD YWQYKRQHFGGDDGVEFLDGAMLVKLIAASPGCTHLRIAFHEDSMQFTVIARD >Mature_133_residues MFTFSVTDIHVVMMRGRLDAYLNGGFRNPHYGVFPGRDEKPGLWLIGDEGVYILSNGKLAVGQRPFVVYAEECDPKTNPD YWQYKRQHFGGDDGVEFLDGAMLVKLIAASPGCTHLRIAFHEDSMQFTVIARD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15001; Mature: 15001
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTFSVTDIHVVMMRGRLDAYLNGGFRNPHYGVFPGRDEKPGLWLIGDEGVYILSNGKLA CEEEEECEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCEEE VGQRPFVVYAEECDPKTNPDYWQYKRQHFGGDDGVEFLDGAMLVKLIAASPGCTHLRIAF ECCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHEEHHHHCCCCCCEEEEEE HEDSMQFTVIARD ECCCEEEEEEEEC >Mature Secondary Structure MFTFSVTDIHVVMMRGRLDAYLNGGFRNPHYGVFPGRDEKPGLWLIGDEGVYILSNGKLA CEEEEECEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCEEE VGQRPFVVYAEECDPKTNPDYWQYKRQHFGGDDGVEFLDGAMLVKLIAASPGCTHLRIAF ECCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHEEHHHHCCCCCCEEEEEE HEDSMQFTVIARD ECCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA