Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
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Accession | NC_003065 |
Length | 214,233 |
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The map label for this gene is yxeK [H]
Identifier: 16119898
GI number: 16119898
Start: 101725
End: 103077
Strand: Direct
Name: yxeK [H]
Synonym: Atu6084
Alternate gene names: 16119898
Gene position: 101725-103077 (Clockwise)
Preceding gene: 16119897
Following gene: 159161970
Centisome position: 47.48
GC content: 61.05
Gene sequence:
>1353_bases ATGCATCTCGCTCTTTATCTCGAGGCAGGCACACATCTCGGAGGTTGGCGGCTCCCGGAGTCGGCCACCTCCGGCGGCGT CGACTGGGCGCTCTACAAGACCGTCGCCCGCCGCGCAGAAGCTGCGAAGCTGGACATGCTTTTCGTCGCTGACAAGCTTT CGATCGACGACAACTACGGCCAGCACTTTGCCGACACGGTGAAGTATCGTCTCGTCACCCGGCCCGAGCCCTTGACCACA CTGGCGGCGCTCGGAGCCGTCACCGATCACATCGGCATAGGCGGCACGATCTCATCATCATATGCCTCGCCTTATGCCGC CGCCCGTATGTTAGCGAACATCGACCATATCAGCGGCGGTCGCGCTGCCTGGAACCTCGTCACCTCCGTAAGCGATGGCG AGGCGCGCAATTTCGGCCGGGAGCAACATTTCGGACACGAGGAGCGCTACCTCCGCGCCATCGAATTTGCGGACGTCATG GGCAAGCTATGGGATAGCTGGGAAGCCGATGCGCTCGTCCTCGACAAGAAGTCCGGCGTCTTCGCGGATTCCACCAAATT CCATTACATCGACCACGAAGGCGACTTCTTCAAAATCCGCGGGCCTATCAACGTACCCCGCCCGCCGCAGGGTCGTCCGG TCCTCATTCAGGCTGGCGTCTCGGACCGGTTCCAGGGGATCGCGGCGCAGAATGCCGAGGTGATCTTCGTCGTCCATGCT GAACTGGAGCGCGCACGAAGCTTCTACAAGAGCTTCAAGGAAAAGGTGGTCGAAGGCGGCCGCTCGGAGAACGCCGTAAA GGTCCTCCCCGGCATCGTCCCCGTGGTCGGTCGCACCCGTAAGGAAGCACTGGACAAGGAACGAGAGCTCAAGGAACTCA TTCTGCCCGAGGCAGGCCTCAGCTTCATGTCGGCGAGCATGAACTTCGACCTCGCCCAGTTCCCCCAGAATGCACCCTTC CCCGATATCACCGACAAGATCACGGGCAGCGTCGGCCGTTTCCAATACGTCATCAAGCGCGCCATTGAACAGAAAATGAC GGTTGCCGAGGTCGGAAAATGGTACGCTGAAAGCCTCTCCTTCTTCGCGCCCGTCGGTACGCCGGAGGAAGTCGCCAGTC AGTTGGCCCATTGGTACGCCCAGCGTGCGTGTGATGGCTTCGTCATCCTGCCTCCCTACATCCGTCGCGACGAGGACCTG TTCCTCGAAGGCGTCGTCCCTGTTCTCCAGGAGCGCGGACTTTTCCGTCGGGAGTATCCCGGAACCACCCTCCGCGAGAC CCTGGGTCTCGAACGGCCAGCCAATCAATTCGAAACACGCGAAACAACCGAGAAAAGGCGCGCTGCGCTCTGA
Upstream 100 bases:
>100_bases CTTTCTTTCGAGATCAGATATTATTCCATTATTTCTATATTGACGATAGATTGTATATAAATAGTCTTCCTGAGAATGAT TATCTCAGGAAGGCGTACGG
Downstream 100 bases:
>100_bases CCTCGCATCAAGGAGTATTGTGATGAAGACCAAGTCAATCATTCGCCTGGCGCTGTCGTTAGCGCTGTCCGTCGCGGCAA CAGTCGCCTCGGCCCAGGAC
Product: nitrilotriacetate monooxygenase, component A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MHLALYLEAGTHLGGWRLPESATSGGVDWALYKTVARRAEAAKLDMLFVADKLSIDDNYGQHFADTVKYRLVTRPEPLTT LAALGAVTDHIGIGGTISSSYASPYAAARMLANIDHISGGRAAWNLVTSVSDGEARNFGREQHFGHEERYLRAIEFADVM GKLWDSWEADALVLDKKSGVFADSTKFHYIDHEGDFFKIRGPINVPRPPQGRPVLIQAGVSDRFQGIAAQNAEVIFVVHA ELERARSFYKSFKEKVVEGGRSENAVKVLPGIVPVVGRTRKEALDKERELKELILPEAGLSFMSASMNFDLAQFPQNAPF PDITDKITGSVGRFQYVIKRAIEQKMTVAEVGKWYAESLSFFAPVGTPEEVASQLAHWYAQRACDGFVILPPYIRRDEDL FLEGVVPVLQERGLFRREYPGTTLRETLGLERPANQFETRETTEKRRAAL
Sequences:
>Translated_450_residues MHLALYLEAGTHLGGWRLPESATSGGVDWALYKTVARRAEAAKLDMLFVADKLSIDDNYGQHFADTVKYRLVTRPEPLTT LAALGAVTDHIGIGGTISSSYASPYAAARMLANIDHISGGRAAWNLVTSVSDGEARNFGREQHFGHEERYLRAIEFADVM GKLWDSWEADALVLDKKSGVFADSTKFHYIDHEGDFFKIRGPINVPRPPQGRPVLIQAGVSDRFQGIAAQNAEVIFVVHA ELERARSFYKSFKEKVVEGGRSENAVKVLPGIVPVVGRTRKEALDKERELKELILPEAGLSFMSASMNFDLAQFPQNAPF PDITDKITGSVGRFQYVIKRAIEQKMTVAEVGKWYAESLSFFAPVGTPEEVASQLAHWYAQRACDGFVILPPYIRRDEDL FLEGVVPVLQERGLFRREYPGTTLRETLGLERPANQFETRETTEKRRAAL >Mature_450_residues MHLALYLEAGTHLGGWRLPESATSGGVDWALYKTVARRAEAAKLDMLFVADKLSIDDNYGQHFADTVKYRLVTRPEPLTT LAALGAVTDHIGIGGTISSSYASPYAAARMLANIDHISGGRAAWNLVTSVSDGEARNFGREQHFGHEERYLRAIEFADVM GKLWDSWEADALVLDKKSGVFADSTKFHYIDHEGDFFKIRGPINVPRPPQGRPVLIQAGVSDRFQGIAAQNAEVIFVVHA ELERARSFYKSFKEKVVEGGRSENAVKVLPGIVPVVGRTRKEALDKERELKELILPEAGLSFMSASMNFDLAQFPQNAPF PDITDKITGSVGRFQYVIKRAIEQKMTVAEVGKWYAESLSFFAPVGTPEEVASQLAHWYAQRACDGFVILPPYIRRDEDL FLEGVVPVLQERGLFRREYPGTTLRETLGLERPANQFETRETTEKRRAAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR016215 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 50163; Mature: 50163
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLALYLEAGTHLGGWRLPESATSGGVDWALYKTVARRAEAAKLDMLFVADKLSIDDNYG CEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCC QHFADTVKYRLVTRPEPLTTLAALGAVTDHIGIGGTISSSYASPYAAARMLANIDHISGG HHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC RAAWNLVTSVSDGEARNFGREQHFGHEERYLRAIEFADVMGKLWDSWEADALVLDKKSGV HHHHHHHCCCCCCHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC FADSTKFHYIDHEGDFFKIRGPINVPRPPQGRPVLIQAGVSDRFQGIAAQNAEVIFVVHA EECCCEEEEECCCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCEEEEEHH ELERARSFYKSFKEKVVEGGRSENAVKVLPGIVPVVGRTRKEALDKERELKELILPEAGL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCH SFMSASMNFDLAQFPQNAPFPDITDKITGSVGRFQYVIKRAIEQKMTVAEVGKWYAESLS HHHHHCCCCCHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFAPVGTPEEVASQLAHWYAQRACDGFVILPPYIRRDEDLFLEGVVPVLQERGLFRREYP HHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCHHCCCCHHHHHHHHHHHHHCCCCHHCCC GTTLRETLGLERPANQFETRETTEKRRAAL CCHHHHHHCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MHLALYLEAGTHLGGWRLPESATSGGVDWALYKTVARRAEAAKLDMLFVADKLSIDDNYG CEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCC QHFADTVKYRLVTRPEPLTTLAALGAVTDHIGIGGTISSSYASPYAAARMLANIDHISGG HHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC RAAWNLVTSVSDGEARNFGREQHFGHEERYLRAIEFADVMGKLWDSWEADALVLDKKSGV HHHHHHHCCCCCCHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC FADSTKFHYIDHEGDFFKIRGPINVPRPPQGRPVLIQAGVSDRFQGIAAQNAEVIFVVHA EECCCEEEEECCCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCEEEEEHH ELERARSFYKSFKEKVVEGGRSENAVKVLPGIVPVVGRTRKEALDKERELKELILPEAGL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCH SFMSASMNFDLAQFPQNAPFPDITDKITGSVGRFQYVIKRAIEQKMTVAEVGKWYAESLS HHHHHCCCCCHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFAPVGTPEEVASQLAHWYAQRACDGFVILPPYIRRDEDLFLEGVVPVLQERGLFRREYP HHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCHHCCCCHHHHHHHHHHHHHCCCCHHCCC GTTLRETLGLERPANQFETRETTEKRRAAL CCHHHHHHCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]