Click here to switch to the map view.

The map label for this gene is ybeB [H]

Identifier: 159185376

GI number: 159185376

Start: 2782366

End: 2782854

Strand: Reverse

Name: ybeB [H]

Synonym: Atu2777

Alternate gene names: 159185376

Gene position: 2782854-2782366 (Counterclockwise)

Preceding gene: 159185377

Following gene: 15890025

Centisome position: 97.93

GC content: 53.78

Gene sequence:

>489_bases
ATGCCACCTTCATGGGGTGACGCACAGATTCGCGTCGCCAGTATCTGTTTTGTCATTCTTGGAAAGGGAAAACCTCTGAC
AACAGTACACACCAAGGGAAAAGCATTTGTTGCTATCCCGAAGGGTCAGGACAGTGGCGACGATGCCGCCGATCATGCCC
TCGAAACCGTCCTCGCGAGCCTCGAGGACTCCAAGGCCGAAGATATCGTATCTCTCGACATTGCCGGAAAATCGGCGCTT
GCAGACTACATGGTCGTGGTCTCCGGGCGATCGAACAGGCATGTCTCGGCGATTTGCGAGCATCTCCTGAAAGATATGAA
GGATGAAGGGTTCGGAAACGCCCGAATCGAAGGCCTTGAGGCCGGAGACTGGGTGGTTATCGACGCCGGCGATATCATCG
TTCATGTGTTCCGTCCGGAAATCCGCGTCTTCTACAACATTGAAAAAATGTGGGCGACGCCTGAAATGCCGGAAGAAACG
CTGCATTGA

Upstream 100 bases:

>100_bases
GTCCGCGCTCGACGCTCAGTTCGACGGCGCTCCGTAATAATCACAAATGATGTATGCGACAGCCGTTGAAGGGTCCATAT
CTTGAAAAGTTAATGCTTTG

Downstream 100 bases:

>100_bases
TGCGGTGAGCCTTTGAGCGAGTGCATCGTGTTTGCCGAAGATCACGCCTGACTTCGGAAAAGGTGTCTCTGGCCGGAAAT
CAGACCGGCCGCATGGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MPPSWGDAQIRVASICFVILGKGKPLTTVHTKGKAFVAIPKGQDSGDDAADHALETVLASLEDSKAEDIVSLDIAGKSAL
ADYMVVVSGRSNRHVSAICEHLLKDMKDEGFGNARIEGLEAGDWVVIDAGDIIVHVFRPEIRVFYNIEKMWATPEMPEET
LH

Sequences:

>Translated_162_residues
MPPSWGDAQIRVASICFVILGKGKPLTTVHTKGKAFVAIPKGQDSGDDAADHALETVLASLEDSKAEDIVSLDIAGKSAL
ADYMVVVSGRSNRHVSAICEHLLKDMKDEGFGNARIEGLEAGDWVVIDAGDIIVHVFRPEIRVFYNIEKMWATPEMPEET
LH
>Mature_161_residues
PPSWGDAQIRVASICFVILGKGKPLTTVHTKGKAFVAIPKGQDSGDDAADHALETVLASLEDSKAEDIVSLDIAGKSALA
DYMVVVSGRSNRHVSAICEHLLKDMKDEGFGNARIEGLEAGDWVVIDAGDIIVHVFRPEIRVFYNIEKMWATPEMPEETL
H

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=113, Percent_Identity=31.858407079646, Blast_Score=73, Evalue=1e-13,
Organism=Escherichia coli, GI87081768, Length=96, Percent_Identity=39.5833333333333, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 17612; Mature: 17481

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPSWGDAQIRVASICFVILGKGKPLTTVHTKGKAFVAIPKGQDSGDDAADHALETVLAS
CCCCCCCCCEEHEEEEEEEECCCCCEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHH
LEDSKAEDIVSLDIAGKSALADYMVVVSGRSNRHVSAICEHLLKDMKDEGFGNARIEGLE
HCCCCCCCEEEEEECCCHHHCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC
AGDWVVIDAGDIIVHVFRPEIRVFYNIEKMWATPEMPEETLH
CCCEEEEECCCEEEEEECCCEEEEEEHHHHCCCCCCCHHHCC
>Mature Secondary Structure 
PPSWGDAQIRVASICFVILGKGKPLTTVHTKGKAFVAIPKGQDSGDDAADHALETVLAS
CCCCCCCCEEHEEEEEEEECCCCCEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHH
LEDSKAEDIVSLDIAGKSALADYMVVVSGRSNRHVSAICEHLLKDMKDEGFGNARIEGLE
HCCCCCCCEEEEEECCCHHHCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC
AGDWVVIDAGDIIVHVFRPEIRVFYNIEKMWATPEMPEETLH
CCCEEEEECCCEEEEEECCCEEEEEEHHHHCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]