Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is crp [C]
Identifier: 159185274
GI number: 159185274
Start: 2552801
End: 2553256
Strand: Direct
Name: crp [C]
Synonym: Atu2578
Alternate gene names: 159185274
Gene position: 2552801-2553256 (Clockwise)
Preceding gene: 15889834
Following gene: 159185275
Centisome position: 89.84
GC content: 53.95
Gene sequence:
>456_bases ATGCTGTTTAAAGACGAAATTCAGATGTTGAAAAGGGTTCCGTTTTTCTCGGAAATGGAACCATCCAAACTCAAGCTGCT CGCATTCGCATCCGACCGGGTGTCCTATCATGCTGGCGATACACTTTTTCGGCAGGGAGATGTCGGCGATGCGGCCTATG TTCTCCTGACTGGAAAAGTGGATGTTCTGGTCGATTCCCCATCGGGCACGCTGAAAGTGGCGGAAATGACCGGCAACGCC ATCGTCGGTGAAATCGCCATTCTCTGTGACAGCGTCAGAACCGCGACCATTCGTGCCTCCACCAATGTGGAAGCCCTGCG CATCGGCAAGGAACAGTTCTTCAAGCTCATGTCCGATTTCCCCGACATTACCATAAAGGTCATGCGCGTTCTCGCCGAAC GCCTTACCCAGACGACGGCGGAACTGAGCAAAGCGCGCGCAGGCGCCAAGACATAA
Upstream 100 bases:
>100_bases AGTTACGAGACTCTCGCCGAGGAAAACGGTACATTCAAGGACATGGTCGCGACATAAATCCAAGAATGTGACCGAGGTGG AACAAGAACAGGGTAAGGCA
Downstream 100 bases:
>100_bases ACGACAATTCCTTGCTACCTTGAATGGCGATATTGGAAAAATAAATGTCGTACTATTGCAATATAAATGAAATGCTGACT GAATAAGGGGTAAAGGGGCC
Product: cAMP-dependent protein kinase regulatory subunit
Products: NA
Alternate protein names: CAMP-Dependent Protein Kinase Regulatory Subunit; Transcriptional Regulator; ABC Transporter Permease Protein; Crp/Fnr Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Transcriptional Regulator Crp; Catabolite Gene Activator; Transcriptional Regulator Protein; CAMP-Dependent Kinase Protein; Stage II Sporulation Protein E; CAMP-Dependent Protein Kinase
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MLFKDEIQMLKRVPFFSEMEPSKLKLLAFASDRVSYHAGDTLFRQGDVGDAAYVLLTGKVDVLVDSPSGTLKVAEMTGNA IVGEIAILCDSVRTATIRASTNVEALRIGKEQFFKLMSDFPDITIKVMRVLAERLTQTTAELSKARAGAKT
Sequences:
>Translated_151_residues MLFKDEIQMLKRVPFFSEMEPSKLKLLAFASDRVSYHAGDTLFRQGDVGDAAYVLLTGKVDVLVDSPSGTLKVAEMTGNA IVGEIAILCDSVRTATIRASTNVEALRIGKEQFFKLMSDFPDITIKVMRVLAERLTQTTAELSKARAGAKT >Mature_151_residues MLFKDEIQMLKRVPFFSEMEPSKLKLLAFASDRVSYHAGDTLFRQGDVGDAAYVLLTGKVDVLVDSPSGTLKVAEMTGNA IVGEIAILCDSVRTATIRASTNVEALRIGKEQFFKLMSDFPDITIKVMRVLAERLTQTTAELSKARAGAKT
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16546; Mature: 16546
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00889 CNMP_BINDING_2 ; PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFKDEIQMLKRVPFFSEMEPSKLKLLAFASDRVSYHAGDTLFRQGDVGDAAYVLLTGKV CCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEECCCCCEEECCCCCCEEEEEEECCE DVLVDSPSGTLKVAEMTGNAIVGEIAILCDSVRTATIRASTNVEALRIGKEQFFKLMSDF EEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCHHHHCCHHHHHHHHHCC PDITIKVMRVLAERLTQTTAELSKARAGAKT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLFKDEIQMLKRVPFFSEMEPSKLKLLAFASDRVSYHAGDTLFRQGDVGDAAYVLLTGKV CCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEECCCCCEEECCCCCCEEEEEEECCE DVLVDSPSGTLKVAEMTGNAIVGEIAILCDSVRTATIRASTNVEALRIGKEQFFKLMSDF EEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCHHHHCCHHHHHHHHHCC PDITIKVMRVLAERLTQTTAELSKARAGAKT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA