Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is modB [H]
Identifier: 159185268
GI number: 159185268
Start: 2534718
End: 2535425
Strand: Direct
Name: modB [H]
Synonym: Atu2562
Alternate gene names: 159185268
Gene position: 2534718-2535425 (Clockwise)
Preceding gene: 159185267
Following gene: 15889821
Centisome position: 89.2
GC content: 62.29
Gene sequence:
>708_bases ATGGCATTGCATTGGTGGACACTCAGCCCTGAAGAATGGACGGCAATCAGGCTCAGCCTGTGGGTGTCCTCCATCGCCAT GCTGGCCAGCCTGCCCTTCGGCATCGCTGTGGCCGTGGCGCTGGCGCGCGGCCGCTTCTGGGGCAAATCGCTGCTCAACG GCATCGTCCACTTGCCCCTCATTCTGCCACCCGTCGTCACCGGTTTTCTGCTGCTGGTCCTCTTCGGCCGCAGAGGCGCA ATCGGCCAATTTCTCGATAGCTGGTTCGGCATAGTCTTTTCCTTTCGCTGGACAGGTGCGGCACTTGCCTGCGCCGTCAT GGCCTTTCCGCTGATGGTGCGCTCCATCCGTCTCTCCATCGAAGCGGTGGACCGCAAGCTGGAAGAGGCGGCGGGAACAT TGGGGGCAAGCCCGCTCTGGGTGTTCCTTACCGTCACCCTGCCACTGACGCTGCCCGGCATCATCGCCGGCATGATCCTC GCTTTCGCCAAGGCCATGGGCGAATTCGGTGCGACCATCACCTTCGTGTCCAATATTCCGGGCGAGACCCAGACGCTGTC CGCCGCCATCTACACCTTCACGCAGGTTCCGGGCGGCGATGCCGGCGCATTGCGCCTCACCATCGTTTCGGTCGTGATTT CCATACTGGCGCTGCTCGTCTCGGAGCTTCTGGCCCGTATCATCGGCAAACGGGTGAGCATGGAATGA
Upstream 100 bases:
>100_bases AGGCGACGCCTTTCTTCGAAAAGCAAGGCTTTACCGTTTTGAAATAAGCTTGCTTCAGGCCCGCTTTCCGGCGGGCCATG AAACATGACGATTGCAGGAT
Downstream 100 bases:
>100_bases CGCTTTCAGTCTCCGCCCGTCACCGCCTCGGCACCTTTGAACTCGACGCCTCCTTCACTTCCGAAGGCGGAGTGACCGCC CTTTTCGGGCGTTCCGGCTC
Product: molybdate ABC transporter permease protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MALHWWTLSPEEWTAIRLSLWVSSIAMLASLPFGIAVAVALARGRFWGKSLLNGIVHLPLILPPVVTGFLLLVLFGRRGA IGQFLDSWFGIVFSFRWTGAALACAVMAFPLMVRSIRLSIEAVDRKLEEAAGTLGASPLWVFLTVTLPLTLPGIIAGMIL AFAKAMGEFGATITFVSNIPGETQTLSAAIYTFTQVPGGDAGALRLTIVSVVISILALLVSELLARIIGKRVSME
Sequences:
>Translated_235_residues MALHWWTLSPEEWTAIRLSLWVSSIAMLASLPFGIAVAVALARGRFWGKSLLNGIVHLPLILPPVVTGFLLLVLFGRRGA IGQFLDSWFGIVFSFRWTGAALACAVMAFPLMVRSIRLSIEAVDRKLEEAAGTLGASPLWVFLTVTLPLTLPGIIAGMIL AFAKAMGEFGATITFVSNIPGETQTLSAAIYTFTQVPGGDAGALRLTIVSVVISILALLVSELLARIIGKRVSME >Mature_234_residues ALHWWTLSPEEWTAIRLSLWVSSIAMLASLPFGIAVAVALARGRFWGKSLLNGIVHLPLILPPVVTGFLLLVLFGRRGAI GQFLDSWFGIVFSFRWTGAALACAVMAFPLMVRSIRLSIEAVDRKLEEAAGTLGASPLWVFLTVTLPLTLPGIIAGMILA FAKAMGEFGATITFVSNIPGETQTLSAAIYTFTQVPGGDAGALRLTIVSVVISILALLVSELLARIIGKRVSME
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=224, Percent_Identity=62.5, Blast_Score=241, Evalue=4e-65, Organism=Escherichia coli, GI1788764, Length=231, Percent_Identity=32.034632034632, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI87082099, Length=187, Percent_Identity=33.1550802139037, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787369, Length=239, Percent_Identity=30.5439330543933, Blast_Score=76, Evalue=1e-15, Organism=Escherichia coli, GI1787080, Length=173, Percent_Identity=33.5260115606936, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787081, Length=172, Percent_Identity=37.2093023255814, Blast_Score=61, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25178; Mature: 25047
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALHWWTLSPEEWTAIRLSLWVSSIAMLASLPFGIAVAVALARGRFWGKSLLNGIVHLPL CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH ILPPVVTGFLLLVLFGRRGAIGQFLDSWFGIVFSFRWTGAALACAVMAFPLMVRSIRLSI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAVDRKLEEAAGTLGASPLWVFLTVTLPLTLPGIIAGMILAFAKAMGEFGATITFVSNIP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC GETQTLSAAIYTFTQVPGGDAGALRLTIVSVVISILALLVSELLARIIGKRVSME CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ALHWWTLSPEEWTAIRLSLWVSSIAMLASLPFGIAVAVALARGRFWGKSLLNGIVHLPL EEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH ILPPVVTGFLLLVLFGRRGAIGQFLDSWFGIVFSFRWTGAALACAVMAFPLMVRSIRLSI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAVDRKLEEAAGTLGASPLWVFLTVTLPLTLPGIIAGMILAFAKAMGEFGATITFVSNIP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC GETQTLSAAIYTFTQVPGGDAGALRLTIVSVVISILALLVSELLARIIGKRVSME CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]