Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is tauC [C]
Identifier: 159185190
GI number: 159185190
Start: 2359474
End: 2360349
Strand: Direct
Name: tauC [C]
Synonym: Atu2389
Alternate gene names: 159185190
Gene position: 2359474-2360349 (Clockwise)
Preceding gene: 15889659
Following gene: 15889661
Centisome position: 83.03
GC content: 63.24
Gene sequence:
>876_bases ATGACCCTCCTCCGCCACCGCATCCTCCCCATCCTCACCGTCCTCCTCGCCATCCTCATCCTCTGGCACCTCGCAGTCAT CTATCTCAACATGCCCTTCGCCCGCGACCAGGCCACCCGCGCCGGCCAGACACCGGGTTTCTTCCAACTCCTGCCGCAGA CCTTCGCGCAGGAGCGCCCGGTCCTGCCCGCCCCGCACCAGATTGCCGCCGAACTCTGGGACACGACCGTCAACAAGGCC ATCACCTCCAAGCGCAGTCTGATCTATCACGCCGGCATCACGCTTTCGGCCACCCTGCTCGGTTTCGCCATCGGCGCCGT TCTCGGCATCCTGCTTGCCGTCGCCATCATCCATAATCGCGCCATGGATCGCTCCGTCATGCCGTGGATCATCGCCAGCC AGACGATCCCCATCCTCGCCATTGCGCCGATGATCATCGTCGTCTTGAACTCCATCGGCATTTCCGGGCTGTTGCCCAAG GCGCTGATTTCCACCTATCTCTCCTTCTTCCCCATCGTGGTCGGCATGGTGAAGGGCCTCAGAAGCCCCGAAACCCTCCA GCTCGATCTCATGCACACCTATAATGCCTCACCGGCGCAGATATTCTGGAAGCTGCGCTGGCCTTCGGCGCTACCCTATC TCTTCACCTCGCTGAAGATCGCCATTGCCATCGCGCTGGTCGGCGCCATCGTCGGGGAATTGCCGACAGGCGCCGTCGCC GGTCTGGGCGCGCGGCTGCTCTCCGGCTCCTATTACGGCCAGACGGTGCAGATATGGGCGGCGTTGTTCATGGCCGCCGG TGTTGCGGCGCTGCTGGTGTCGATCATCGGCATTGCCCACGCCGCGGTGCTGAAAAGAATGGGAGCACGGCCATGA
Upstream 100 bases:
>100_bases CCCTTGTGGGGGAGATGTCCGGCAGGACAGAGGGGGGTAAACGGCACCCCCGGAGTGAGCGTAAACCCCACCCACAGAGC AAGTGTCGGAGCGAAACACC
Downstream 100 bases:
>100_bases CGAACCCCTCTTGGTTTATCGGCGCGATCCTTTTCTGGCTTGCCGCCTGGGCCTTCAACGAATGGCTGGTGCGTCGCAAT TTCACCTCTTCCTTGGCACA
Product: ABC transporter, membrane spanning protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MTLLRHRILPILTVLLAILILWHLAVIYLNMPFARDQATRAGQTPGFFQLLPQTFAQERPVLPAPHQIAAELWDTTVNKA ITSKRSLIYHAGITLSATLLGFAIGAVLGILLAVAIIHNRAMDRSVMPWIIASQTIPILAIAPMIIVVLNSIGISGLLPK ALISTYLSFFPIVVGMVKGLRSPETLQLDLMHTYNASPAQIFWKLRWPSALPYLFTSLKIAIAIALVGAIVGELPTGAVA GLGARLLSGSYYGQTVQIWAALFMAAGVAALLVSIIGIAHAAVLKRMGARP
Sequences:
>Translated_291_residues MTLLRHRILPILTVLLAILILWHLAVIYLNMPFARDQATRAGQTPGFFQLLPQTFAQERPVLPAPHQIAAELWDTTVNKA ITSKRSLIYHAGITLSATLLGFAIGAVLGILLAVAIIHNRAMDRSVMPWIIASQTIPILAIAPMIIVVLNSIGISGLLPK ALISTYLSFFPIVVGMVKGLRSPETLQLDLMHTYNASPAQIFWKLRWPSALPYLFTSLKIAIAIALVGAIVGELPTGAVA GLGARLLSGSYYGQTVQIWAALFMAAGVAALLVSIIGIAHAAVLKRMGARP >Mature_290_residues TLLRHRILPILTVLLAILILWHLAVIYLNMPFARDQATRAGQTPGFFQLLPQTFAQERPVLPAPHQIAAELWDTTVNKAI TSKRSLIYHAGITLSATLLGFAIGAVLGILLAVAIIHNRAMDRSVMPWIIASQTIPILAIAPMIIVVLNSIGISGLLPKA LISTYLSFFPIVVGMVKGLRSPETLQLDLMHTYNASPAQIFWKLRWPSALPYLFTSLKIAIAIALVGAIVGELPTGAVAG LGARLLSGSYYGQTVQIWAALFMAAGVAALLVSIIGIAHAAVLKRMGARP
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31287; Mature: 31156
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLRHRILPILTVLLAILILWHLAVIYLNMPFARDQATRAGQTPGFFQLLPQTFAQERP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCC VLPAPHQIAAELWDTTVNKAITSKRSLIYHAGITLSATLLGFAIGAVLGILLAVAIIHNR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMDRSVMPWIIASQTIPILAIAPMIIVVLNSIGISGLLPKALISTYLSFFPIVVGMVKGL HHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCC RSPETLQLDLMHTYNASPAQIFWKLRWPSALPYLFTSLKIAIAIALVGAIVGELPTGAVA CCCCCEEEEEHHHCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH GLGARLLSGSYYGQTVQIWAALFMAAGVAALLVSIIGIAHAAVLKRMGARP HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TLLRHRILPILTVLLAILILWHLAVIYLNMPFARDQATRAGQTPGFFQLLPQTFAQERP CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCC VLPAPHQIAAELWDTTVNKAITSKRSLIYHAGITLSATLLGFAIGAVLGILLAVAIIHNR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMDRSVMPWIIASQTIPILAIAPMIIVVLNSIGISGLLPKALISTYLSFFPIVVGMVKGL HHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCC RSPETLQLDLMHTYNASPAQIFWKLRWPSALPYLFTSLKIAIAIALVGAIVGELPTGAVA CCCCCEEEEEHHHCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH GLGARLLSGSYYGQTVQIWAALFMAAGVAALLVSIIGIAHAAVLKRMGARP HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]