Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184555
Identifier: 159184555
GI number: 159184555
Start: 958125
End: 958364
Strand: Direct
Name: 159184555
Synonym: Atu0968
Alternate gene names: NA
Gene position: 958125-958364 (Clockwise)
Preceding gene: 15888310
Following gene: 15888312
Centisome position: 33.72
GC content: 60.42
Gene sequence:
>240_bases ATGTGCCTGAAAAACAACGCAAAGGACGAGATTATGGACAGTACCAAAGCATGGTATCAATCCCGCACGATCTGGGGCGC GCTGATCGCGGTTTTCGCACCGCTTTTCAGCATTGCCGGCTTCGATCTGCCCGCTGGCCTGCACGGGGAGCTCGCTGAAG GGCTGGTGACGGTTGCGGGCGGAATCGGCGGTCTGATCGCACTTTACGGCCGCCTTTCGGCGACCCGCTCCATCCGCTGA
Upstream 100 bases:
>100_bases GATTTCCCGCAGCTACGGGATCACATTTCCGTGCGTGTCCGCCAGCTGGGCCGCGCGGTGCCGCTGGGGGTGGTGTCTCA GGCCCTTCTCCCGCTCTGAC
Downstream 100 bases:
>100_bases CGGGGCTCACGAAAACGCCGCTCCCGCCACGCATTGCGGCGGCGGGCCCGGCATTCATTTGCCATTCAGACGCTTTGCGC TACATATTCGCTCACACTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MCLKNNAKDEIMDSTKAWYQSRTIWGALIAVFAPLFSIAGFDLPAGLHGELAEGLVTVAGGIGGLIALYGRLSATRSIR
Sequences:
>Translated_79_residues MCLKNNAKDEIMDSTKAWYQSRTIWGALIAVFAPLFSIAGFDLPAGLHGELAEGLVTVAGGIGGLIALYGRLSATRSIR >Mature_79_residues MCLKNNAKDEIMDSTKAWYQSRTIWGALIAVFAPLFSIAGFDLPAGLHGELAEGLVTVAGGIGGLIALYGRLSATRSIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8367; Mature: 8367
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLKNNAKDEIMDSTKAWYQSRTIWGALIAVFAPLFSIAGFDLPAGLHGELAEGLVTVAG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH GIGGLIALYGRLSATRSIR HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MCLKNNAKDEIMDSTKAWYQSRTIWGALIAVFAPLFSIAGFDLPAGLHGELAEGLVTVAG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH GIGGLIALYGRLSATRSIR HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA