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The map label for this gene is asnC [C]

Identifier: 159184546

GI number: 159184546

Start: 936462

End: 936893

Strand: Direct

Name: asnC [C]

Synonym: Atu0947

Alternate gene names: 159184546

Gene position: 936462-936893 (Clockwise)

Preceding gene: 159184545

Following gene: 15888288

Centisome position: 32.96

GC content: 63.89

Gene sequence:

>432_bases
ATGGCAATCGCCGACAAGGACCGGGCGCTGCTCGCCCTGCTTTCCGAAAACGCCCGCATGCCGGTGGCGGAACTGGCGCG
CAAACTCGGGCTTTCCCGTACCACCGTGCAGGCGCGAATCGAGCGGCTGGAGGCCGATGGTGTGATTGCCGGTTACGGCT
TGCGGCTGTCGGAAAGTTATCTTTCCGGGCTGGTGCGCGCCCATGTGCTGATCACCATCGGGCCGAAGGCACTGCCGGCG
GTGACGGCGGCGCTCACCGCCATAAAAGAGGTGACGACGCTGCATTCGGTCAGCGGCACCTTCGATCTCATCGCCATTCT
CGCCGCCCCCTCGATCCTCGATCTCGATCGGCTGATCGACAGGATCGGCGCACTTGATGGCGTGGAGCGCACGCTGTCGT
CGATCATTCTGTCCACGCGGATTTCGCGATAG

Upstream 100 bases:

>100_bases
CATAGGGCACAATCATATTGCGGTTCTGCTGCGATTCGAAGCTTCACTATGTGCATATTGAAGTCTATTATTAGACGATA
AGACGACAGGATTGAACACT

Downstream 100 bases:

>100_bases
CGATTACGGGGAGTATAGGGGCTGTCACGGGCTAAGCCGCTACCCTCTCATCATAAGCCCTCTGCGCCGCCATCACCGCC
TCGATATTGCCTTCCGCCCA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MAIADKDRALLALLSENARMPVAELARKLGLSRTTVQARIERLEADGVIAGYGLRLSESYLSGLVRAHVLITIGPKALPA
VTAALTAIKEVTTLHSVSGTFDLIAILAAPSILDLDRLIDRIGALDGVERTLSSIILSTRISR

Sequences:

>Translated_143_residues
MAIADKDRALLALLSENARMPVAELARKLGLSRTTVQARIERLEADGVIAGYGLRLSESYLSGLVRAHVLITIGPKALPA
VTAALTAIKEVTTLHSVSGTFDLIAILAAPSILDLDRLIDRIGALDGVERTLSSIILSTRISR
>Mature_142_residues
AIADKDRALLALLSENARMPVAELARKLGLSRTTVQARIERLEADGVIAGYGLRLSESYLSGLVRAHVLITIGPKALPAV
TAALTAIKEVTTLHSVSGTFDLIAILAAPSILDLDRLIDRIGALDGVERTLSSIILSTRISR

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=143, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=4e-12,
Organism=Escherichia coli, GI1787116, Length=136, Percent_Identity=29.4117647058824, Blast_Score=63, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 15210; Mature: 15079

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIADKDRALLALLSENARMPVAELARKLGLSRTTVQARIERLEADGVIAGYGLRLSESY
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCHHHHH
LSGLVRAHVLITIGPKALPAVTAALTAIKEVTTLHSVSGTFDLIAILAAPSILDLDRLID
HHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH
RIGALDGVERTLSSIILSTRISR
HHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIADKDRALLALLSENARMPVAELARKLGLSRTTVQARIERLEADGVIAGYGLRLSESY
CCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCHHHHH
LSGLVRAHVLITIGPKALPAVTAALTAIKEVTTLHSVSGTFDLIAILAAPSILDLDRLID
HHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH
RIGALDGVERTLSSIILSTRISR
HHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA