Click here to switch to the map view.

The map label for this gene is 159184507

Identifier: 159184507

GI number: 159184507

Start: 864882

End: 865589

Strand: Direct

Name: 159184507

Synonym: Atu0868

Alternate gene names: NA

Gene position: 864882-865589 (Clockwise)

Preceding gene: 159184505

Following gene: 15888210

Centisome position: 30.44

GC content: 64.41

Gene sequence:

>708_bases
GTGTCACGCTCACAACGGCTTCTCGATCTCCTGCAGATCCTCCGCTCCCACCGCATGCCGGTCAGCGGTGCGGCGCTTGC
CGCCGAGACCGGCGTCAGCCTGCGCACGCTCTACCGCGATATAGCGACGCTGCAGGCGCAGGGCGCGGATATCGAGGGTG
AGGCAGGCGTGGGTTACGTGCTGCGTCCCGGTTTCCTGTTGCCGCCGCTGATGTTTTCGCAGCAGGAAATCGAGGCGCTG
GTGCTGGGTTCACGCTGGGTGGCGGGCCGCGCCGATGCCGGGCTGGCCGAGGCCGCGCGTGCCGCACTCGTCAAGATCGC
TGCCGTTCTGCCCGATGCACTGCGTGAGGAACTCGATAATTCCACCCTGCTTGTCGGCCCGGGGCAGGGCCTTGCCGCCA
TCCGTGTCGATCTGGCCGCCATTCGCGAAACCATCAGGAAAGAGAGCAAGGCGGTGATGACCTATCGTGATGAGAAGGGA
GACCTGACGGAGCGGGTCATCTGGCCCTTTGCGCTCGCTTTTTTCGATCTGGTGCGCGTGGTGCTGGCATGGTGCGAAAC
CCGGCAGGATTTCCGCAGCTTCCGGGCTGACCGCATCGAAAGCTTCCGTCCTCTCGACAACCGTTACCCGCGCCGCCGCC
AGGCGCTGATGAAAGAATGGCGCGAGCGGGAGAAACAGCGGCGACGCAATCATGCTGACAAAAACTGA

Upstream 100 bases:

>100_bases
CCCTCTGAGCGGTTGCACGGGATAACGGACGGCGCTACGCCTCTGAATGTCCGCAAAGCCAACGCGCAGGTCGGGCGACA
GGGATGGAAGGAAATCTCGC

Downstream 100 bases:

>100_bases
CAACAGGCGGGTCTAGAAACCGTTCATCCGCAACACAGGAGAACGACCATGACCCACCCCGATTTCACCATCCTCTATGT
CGACAACCCGCCGGCCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; DeoR-Family Transcriptional Regulator; HTH Domain Family; Transcription Regulator Protein; Regulatory Protein; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; HTH Domain-Containing Protein; Transcription Regulator Protein DeoR Family; HTH Domain-Containing; Helix-Turn-Helix Domain-Containing Protein; HTH Domain Protein; Transcriptional Regulator-Like; Bacterial Regulatory Protein DeoR Family; Protein Containing HTH Domain; Transriptional Regulator DeoR Family; NB-Dependent Receptor

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSRSQRLLDLLQILRSHRMPVSGAALAAETGVSLRTLYRDIATLQAQGADIEGEAGVGYVLRPGFLLPPLMFSQQEIEAL
VLGSRWVAGRADAGLAEAARAALVKIAAVLPDALREELDNSTLLVGPGQGLAAIRVDLAAIRETIRKESKAVMTYRDEKG
DLTERVIWPFALAFFDLVRVVLAWCETRQDFRSFRADRIESFRPLDNRYPRRRQALMKEWREREKQRRRNHADKN

Sequences:

>Translated_235_residues
MSRSQRLLDLLQILRSHRMPVSGAALAAETGVSLRTLYRDIATLQAQGADIEGEAGVGYVLRPGFLLPPLMFSQQEIEAL
VLGSRWVAGRADAGLAEAARAALVKIAAVLPDALREELDNSTLLVGPGQGLAAIRVDLAAIRETIRKESKAVMTYRDEKG
DLTERVIWPFALAFFDLVRVVLAWCETRQDFRSFRADRIESFRPLDNRYPRRRQALMKEWREREKQRRRNHADKN
>Mature_234_residues
SRSQRLLDLLQILRSHRMPVSGAALAAETGVSLRTLYRDIATLQAQGADIEGEAGVGYVLRPGFLLPPLMFSQQEIEALV
LGSRWVAGRADAGLAEAARAALVKIAAVLPDALREELDNSTLLVGPGQGLAAIRVDLAAIRETIRKESKAVMTYRDEKGD
LTERVIWPFALAFFDLVRVVLAWCETRQDFRSFRADRIESFRPLDNRYPRRRQALMKEWREREKQRRRNHADKN

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26566; Mature: 26435

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSQRLLDLLQILRSHRMPVSGAALAAETGVSLRTLYRDIATLQAQGADIEGEAGVGYV
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
LRPGFLLPPLMFSQQEIEALVLGSRWVAGRADAGLAEAARAALVKIAAVLPDALREELDN
ECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
STLLVGPGQGLAAIRVDLAAIRETIRKESKAVMTYRDEKGDLTERVIWPFALAFFDLVRV
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHH
VLAWCETRQDFRSFRADRIESFRPLDNRYPRRRQALMKEWREREKQRRRNHADKN
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SRSQRLLDLLQILRSHRMPVSGAALAAETGVSLRTLYRDIATLQAQGADIEGEAGVGYV
CHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
LRPGFLLPPLMFSQQEIEALVLGSRWVAGRADAGLAEAARAALVKIAAVLPDALREELDN
ECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
STLLVGPGQGLAAIRVDLAAIRETIRKESKAVMTYRDEKGDLTERVIWPFALAFFDLVRV
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHH
VLAWCETRQDFRSFRADRIESFRPLDNRYPRRRQALMKEWREREKQRRRNHADKN
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA