Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184309
Identifier: 159184309
GI number: 159184309
Start: 443396
End: 444616
Strand: Direct
Name: 159184309
Synonym: Atu0449
Alternate gene names: NA
Gene position: 443396-444616 (Clockwise)
Preceding gene: 15887798
Following gene: 159184310
Centisome position: 15.6
GC content: 58.15
Gene sequence:
>1221_bases ATGGAACCGGATCACGGCGCAATGTCGCGCGCATGGTCATGGCGTCACGCGGTCGGTAAATCCGGCCTTCCGCCGATCAC GCGCCTTGTGCTGCATACGCTTGGCCTGAAAATGGATGCGACCGGTGGTTCCTGCTATCCGCCGATTTCGGAACTGGTGG ACCTGACGGGCCTCGACAAGAAAACCGTCCTGAAACACCTCGAAATCGCCGAAGAAAGCGGTTGGATTGTCGTCACGCAA CACGGATTTCGCGGCCAGAAATGGAAGCGGAACGAATATGTTGCGCGCTGGCCGGGGCGCGACCTTTCCGGCAATGCCGC CAGCACCGAAGATAACGAAGGCGGTGGAAATCCTCCACCGCGTTCCGTCGCCAAGGCGGTGGAAATCGTTCCCGAAGGTG GTGGAAATGACGACCGGAAGGTGGTGGAGGAGTTCCACCAAGATAAGAATCTTCCAACTAACATTCCAGAAAACTCTCCA GCCGCTGGCGCGGAAGAGGGAGTTTTGAAAAAGGTTGATCGAAAAAAGATAGAGCACGCTTTCACGCTGTGGTTCGCGAT GTGGAAAAAGGGTGATGTCGAATATGCCCGCAACGCGTGGTTCGCTCTTTCCCCGGAAGATCGGACCGAGTGCGTGGAGC GGACGCCTGCCTATCTTCGTTGGGCCAAGCCTGCCGATCTGATGGCCGCAGCGGTCTACCTCAAAAACCGTCACTGGCGC GACCTGCCGGAACATGTTCTTGCGGAGCCGATCAACGCCCATGGCATTGCCAAGGTTTGCGGCAAGCTCTGGATGGGAAC GCGTTTTGAGGCGTTGTCGAAAGAGCCGACCGGCCTGCTGTATGTGACCAGCTTTGACGAAACCCGTATCGCCAAGGGCA TGATTTCCCGCGAACAGCTTATGTTCGAAAAGCGCCGTGACAATGGCTGGCCACTCGTCAACACCATGCGAGACCTCGCC CGTCGCCGCGAGCCTTTCAACACCTCGCTCTCGCTTCTCCCCTTGGTGCAGGGCTTCCGGCAGGTGCACCGCGACAGCGA TGTGTTCGCGGCTTGGAAGCACCTGCATGAGCGCAACGGCTGGCCTTTCATCGAACATCCGCCCGAATGGGTCTACTTCC CCCCGGTCGATGACGGGGCTGACGATCTTGAAGCGGCGGTTGATGCCGCGCTTTCCAAATTTCTTTCCACCATCAGCGAG GGACGCAACAATGATGCATAA
Upstream 100 bases:
>100_bases CACGCCTGCCGGATGGCGGATTGCCGCATACGGTTGTTCTCGGCGTCCATGCTGTGCGCTCATTCCTGCGCGACGTGGTG CGGAAAGGCGGTGCACAGTG
Downstream 100 bases:
>100_bases CGTGAAGATTTATGCCGCCAGCAAGCCGGTCAACCCGGAGCTTTATGACCTGTCGCGTTTTGCGTCTCTGTTCGACCAGA TGCAGAACACGAAGCGACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MEPDHGAMSRAWSWRHAVGKSGLPPITRLVLHTLGLKMDATGGSCYPPISELVDLTGLDKKTVLKHLEIAEESGWIVVTQ HGFRGQKWKRNEYVARWPGRDLSGNAASTEDNEGGGNPPPRSVAKAVEIVPEGGGNDDRKVVEEFHQDKNLPTNIPENSP AAGAEEGVLKKVDRKKIEHAFTLWFAMWKKGDVEYARNAWFALSPEDRTECVERTPAYLRWAKPADLMAAAVYLKNRHWR DLPEHVLAEPINAHGIAKVCGKLWMGTRFEALSKEPTGLLYVTSFDETRIAKGMISREQLMFEKRRDNGWPLVNTMRDLA RRREPFNTSLSLLPLVQGFRQVHRDSDVFAAWKHLHERNGWPFIEHPPEWVYFPPVDDGADDLEAAVDAALSKFLSTISE GRNNDA
Sequences:
>Translated_406_residues MEPDHGAMSRAWSWRHAVGKSGLPPITRLVLHTLGLKMDATGGSCYPPISELVDLTGLDKKTVLKHLEIAEESGWIVVTQ HGFRGQKWKRNEYVARWPGRDLSGNAASTEDNEGGGNPPPRSVAKAVEIVPEGGGNDDRKVVEEFHQDKNLPTNIPENSP AAGAEEGVLKKVDRKKIEHAFTLWFAMWKKGDVEYARNAWFALSPEDRTECVERTPAYLRWAKPADLMAAAVYLKNRHWR DLPEHVLAEPINAHGIAKVCGKLWMGTRFEALSKEPTGLLYVTSFDETRIAKGMISREQLMFEKRRDNGWPLVNTMRDLA RRREPFNTSLSLLPLVQGFRQVHRDSDVFAAWKHLHERNGWPFIEHPPEWVYFPPVDDGADDLEAAVDAALSKFLSTISE GRNNDA >Mature_406_residues MEPDHGAMSRAWSWRHAVGKSGLPPITRLVLHTLGLKMDATGGSCYPPISELVDLTGLDKKTVLKHLEIAEESGWIVVTQ HGFRGQKWKRNEYVARWPGRDLSGNAASTEDNEGGGNPPPRSVAKAVEIVPEGGGNDDRKVVEEFHQDKNLPTNIPENSP AAGAEEGVLKKVDRKKIEHAFTLWFAMWKKGDVEYARNAWFALSPEDRTECVERTPAYLRWAKPADLMAAAVYLKNRHWR DLPEHVLAEPINAHGIAKVCGKLWMGTRFEALSKEPTGLLYVTSFDETRIAKGMISREQLMFEKRRDNGWPLVNTMRDLA RRREPFNTSLSLLPLVQGFRQVHRDSDVFAAWKHLHERNGWPFIEHPPEWVYFPPVDDGADDLEAAVDAALSKFLSTISE GRNNDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45766; Mature: 45766
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPDHGAMSRAWSWRHAVGKSGLPPITRLVLHTLGLKMDATGGSCYPPISELVDLTGLDK CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHCCCCH KTVLKHLEIAEESGWIVVTQHGFRGQKWKRNEYVARWPGRDLSGNAASTEDNEGGGNPPP HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCH RSVAKAVEIVPEGGGNDDRKVVEEFHQDKNLPTNIPENSPAAGAEEGVLKKVDRKKIEHA HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH FTLWFAMWKKGDVEYARNAWFALSPEDRTECVERTPAYLRWAKPADLMAAAVYLKNRHWR HHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHHCCHHHEEECCCHHHHHHHHHHHCCCCC DLPEHVLAEPINAHGIAKVCGKLWMGTRFEALSKEPTGLLYVTSFDETRIAKGMISREQL CCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH MFEKRRDNGWPLVNTMRDLARRREPFNTSLSLLPLVQGFRQVHRDSDVFAAWKHLHERNG HHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC WPFIEHPPEWVYFPPVDDGADDLEAAVDAALSKFLSTISEGRNNDA CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEPDHGAMSRAWSWRHAVGKSGLPPITRLVLHTLGLKMDATGGSCYPPISELVDLTGLDK CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHCCCCH KTVLKHLEIAEESGWIVVTQHGFRGQKWKRNEYVARWPGRDLSGNAASTEDNEGGGNPPP HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCH RSVAKAVEIVPEGGGNDDRKVVEEFHQDKNLPTNIPENSPAAGAEEGVLKKVDRKKIEHA HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH FTLWFAMWKKGDVEYARNAWFALSPEDRTECVERTPAYLRWAKPADLMAAAVYLKNRHWR HHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHHCCHHHEEECCCHHHHHHHHHHHCCCCC DLPEHVLAEPINAHGIAKVCGKLWMGTRFEALSKEPTGLLYVTSFDETRIAKGMISREQL CCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH MFEKRRDNGWPLVNTMRDLARRREPFNTSLSLLPLVQGFRQVHRDSDVFAAWKHLHERNG HHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC WPFIEHPPEWVYFPPVDDGADDLEAAVDAALSKFLSTISEGRNNDA CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA