Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is pstC [H]
Identifier: 159184302
GI number: 159184302
Start: 417601
End: 419085
Strand: Direct
Name: pstC [H]
Synonym: Atu0421
Alternate gene names: 159184302
Gene position: 417601-419085 (Clockwise)
Preceding gene: 15887768
Following gene: 15887770
Centisome position: 14.7
GC content: 62.22
Gene sequence:
>1485_bases ATGAACACATCGATCCTTTTGCTGATACTGGCGCTCATCGGCATCGGCAGTTATCTGCTCGGCCGCCGCCGCGCTGTTGT CCTGTCTGGTGGCCGTCCCTCCAGCATGCATTCCCGTGCCGGTTATCACGGCTCTTACGCGGTCGTCTGGGCTGTTTTGC CCGCGGCGTTCATTCTCTGTGCCTGGCTGGTCATCAGCCCGCTGCTCGTCACTTCCGCGGTGCGCGGTGATTTTCCGGAG GATGTCCGGGCGCAATCCGAGGCACAGCAGAGCCTCACCTATGGCATGGTGACCTCCATTGCCCGTGGCCTCCAACGGCT GGCGCCGGAAGAAACCGCGCAGGTTGAGGCCGACACGGCAGCGGTCCGGCCGCTTCTGGCATCGAAAGGTGTCGCGATCG CCGGTGAACCGCAGCGTTTCATGGTCGACGCGGCCCAGACGCTGAACGCGATGACCTCCACCAGCCGCCTGGGTATGATC GCCACCGTGCTGCTGGTCGCATTCGCCGGTGCCGCTTATGCACTGCGTTCAATCGCGCCGCGTTTTCGGGCGCGCAACAG GGTGGAGAGGGTCATTCTCGCGGCTCTGGTCGTCGCGTCGTCCATCGCCATCCTCACGACCATCGGCATCGTCCTTTCGA TGCTCACGGAAGCGATCCAGTTCTTCACCATGGTTCCGGCGCACCAGTTCTTCTTCGGAACGGTTTGGGATCCGCGTTTT GCCGCGGCCGGCGCGACGGACTCTTCCGGCCAGTTCGGCCTGATCCCGCTGCTCGCCGGCACGCTCTATATCGGTTTCGT CGCCATGCTGGTCGCCGTGCCGGTCGGGCTGTTTTCGGCGATCTACATGTCGGAATATGCAACGCCACGCCTTCGCTCGG TGGTAAAGCCGCTGCTCGAAGTGCTCGCGGGCATCCCCACCATCGTCTACGGCTTCTTCGCGCTGACGACGGTCGGTCCT TTCCTCAGAGACATTTCCACGCAGATCAACGGTCTGGCGACGGGCAACTACGCCAATTTCATTCAGGCGCAGAGCGTCAT CACCGCCGGCTTCGTCATGGGCATCATGTTGATCCCCTATGTCTCGTCGCTGTCGGATGACATCATCACCGCCGTTCCGC GCTCGCTGCGTGACGGTTCGCTGGGTCTCGGCGCCACACGGTCCGAAACCATCAAGAAGGTCATCGTTCCCGCCGCTCTT CCCGGCATCGTCGGCGCCGTGCTGATGACGGCCTCGCGCGCCATCGGCGAAACCATGATCGTGGTTCTGGCGGCCGGCGT TGCTGCCCGCCTGCAGCTCAATCCTTTCGAGCCCATGACAACGGTGACGGTGAAGATCGTCAGCCAGCTGACCGGTGACC TTGAATTTACCTCGCCCCAGACGCTGGTCGCCTTCGCGCTCGGCATCACGCTTTTCGCCATCACGCTTTGCCTGAATATC TACGCGCTATACATTGTGCGCAAATACCGGGAGCAATATGAATGA
Upstream 100 bases:
>100_bases GGCGGCAAGCATCTCCGGATGGTCCAGCGGTCTCGTTTTGATGACTTTTTGATTTGCCCGATATCGCACCGTGCTCTTGA GGCACGCCGAGGGAACTCTA
Downstream 100 bases:
>100_bases CCGACATCGTCTCTCCCGCAGCCGGCGGTAGCGCCGTGAACAAAGCCACGCGCCGTGATATCGGCATCAAGCGCCGCTAT GCCGCCGAACGTCGCTTCCG
Product: ABC transporter, membrane spanning protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MNTSILLLILALIGIGSYLLGRRRAVVLSGGRPSSMHSRAGYHGSYAVVWAVLPAAFILCAWLVISPLLVTSAVRGDFPE DVRAQSEAQQSLTYGMVTSIARGLQRLAPEETAQVEADTAAVRPLLASKGVAIAGEPQRFMVDAAQTLNAMTSTSRLGMI ATVLLVAFAGAAYALRSIAPRFRARNRVERVILAALVVASSIAILTTIGIVLSMLTEAIQFFTMVPAHQFFFGTVWDPRF AAAGATDSSGQFGLIPLLAGTLYIGFVAMLVAVPVGLFSAIYMSEYATPRLRSVVKPLLEVLAGIPTIVYGFFALTTVGP FLRDISTQINGLATGNYANFIQAQSVITAGFVMGIMLIPYVSSLSDDIITAVPRSLRDGSLGLGATRSETIKKVIVPAAL PGIVGAVLMTASRAIGETMIVVLAAGVAARLQLNPFEPMTTVTVKIVSQLTGDLEFTSPQTLVAFALGITLFAITLCLNI YALYIVRKYREQYE
Sequences:
>Translated_494_residues MNTSILLLILALIGIGSYLLGRRRAVVLSGGRPSSMHSRAGYHGSYAVVWAVLPAAFILCAWLVISPLLVTSAVRGDFPE DVRAQSEAQQSLTYGMVTSIARGLQRLAPEETAQVEADTAAVRPLLASKGVAIAGEPQRFMVDAAQTLNAMTSTSRLGMI ATVLLVAFAGAAYALRSIAPRFRARNRVERVILAALVVASSIAILTTIGIVLSMLTEAIQFFTMVPAHQFFFGTVWDPRF AAAGATDSSGQFGLIPLLAGTLYIGFVAMLVAVPVGLFSAIYMSEYATPRLRSVVKPLLEVLAGIPTIVYGFFALTTVGP FLRDISTQINGLATGNYANFIQAQSVITAGFVMGIMLIPYVSSLSDDIITAVPRSLRDGSLGLGATRSETIKKVIVPAAL PGIVGAVLMTASRAIGETMIVVLAAGVAARLQLNPFEPMTTVTVKIVSQLTGDLEFTSPQTLVAFALGITLFAITLCLNI YALYIVRKYREQYE >Mature_494_residues MNTSILLLILALIGIGSYLLGRRRAVVLSGGRPSSMHSRAGYHGSYAVVWAVLPAAFILCAWLVISPLLVTSAVRGDFPE DVRAQSEAQQSLTYGMVTSIARGLQRLAPEETAQVEADTAAVRPLLASKGVAIAGEPQRFMVDAAQTLNAMTSTSRLGMI ATVLLVAFAGAAYALRSIAPRFRARNRVERVILAALVVASSIAILTTIGIVLSMLTEAIQFFTMVPAHQFFFGTVWDPRF AAAGATDSSGQFGLIPLLAGTLYIGFVAMLVAVPVGLFSAIYMSEYATPRLRSVVKPLLEVLAGIPTIVYGFFALTTVGP FLRDISTQINGLATGNYANFIQAQSVITAGFVMGIMLIPYVSSLSDDIITAVPRSLRDGSLGLGATRSETIKKVIVPAAL PGIVGAVLMTASRAIGETMIVVLAAGVAARLQLNPFEPMTTVTVKIVSQLTGDLEFTSPQTLVAFALGITLFAITLCLNI YALYIVRKYREQYE
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=313, Percent_Identity=27.1565495207668, Blast_Score=100, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 52518; Mature: 52518
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSILLLILALIGIGSYLLGRRRAVVLSGGRPSSMHSRAGYHGSYAVVWAVLPAAFILC CCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHH AWLVISPLLVTSAVRGDFPEDVRAQSEAQQSLTYGMVTSIARGLQRLAPEETAQVEADTA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AVRPLLASKGVAIAGEPQRFMVDAAQTLNAMTSTSRLGMIATVLLVAFAGAAYALRSIAP HHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFRARNRVERVILAALVVASSIAILTTIGIVLSMLTEAIQFFTMVPAHQFFFGTVWDPRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH AAAGATDSSGQFGLIPLLAGTLYIGFVAMLVAVPVGLFSAIYMSEYATPRLRSVVKPLLE HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VLAGIPTIVYGFFALTTVGPFLRDISTQINGLATGNYANFIQAQSVITAGFVMGIMLIPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VSSLSDDIITAVPRSLRDGSLGLGATRSETIKKVIVPAALPGIVGAVLMTASRAIGETMI HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVLAAGVAARLQLNPFEPMTTVTVKIVSQLTGDLEFTSPQTLVAFALGITLFAITLCLNI HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH YALYIVRKYREQYE HHHHHHHHHHHHCC >Mature Secondary Structure MNTSILLLILALIGIGSYLLGRRRAVVLSGGRPSSMHSRAGYHGSYAVVWAVLPAAFILC CCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHH AWLVISPLLVTSAVRGDFPEDVRAQSEAQQSLTYGMVTSIARGLQRLAPEETAQVEADTA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AVRPLLASKGVAIAGEPQRFMVDAAQTLNAMTSTSRLGMIATVLLVAFAGAAYALRSIAP HHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFRARNRVERVILAALVVASSIAILTTIGIVLSMLTEAIQFFTMVPAHQFFFGTVWDPRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH AAAGATDSSGQFGLIPLLAGTLYIGFVAMLVAVPVGLFSAIYMSEYATPRLRSVVKPLLE HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VLAGIPTIVYGFFALTTVGPFLRDISTQINGLATGNYANFIQAQSVITAGFVMGIMLIPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VSSLSDDIITAVPRSLRDGSLGLGATRSETIKKVIVPAALPGIVGAVLMTASRAIGETMI HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVLAAGVAARLQLNPFEPMTTVTVKIVSQLTGDLEFTSPQTLVAFALGITLFAITLCLNI HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH YALYIVRKYREQYE HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]