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The map label for this gene is rsmI [H]

Identifier: 159184248

GI number: 159184248

Start: 295140

End: 296081

Strand: Direct

Name: rsmI [H]

Synonym: Atu0302

Alternate gene names: 159184248

Gene position: 295140-296081 (Clockwise)

Preceding gene: 159184244

Following gene: 15887652

Centisome position: 10.39

GC content: 63.16

Gene sequence:

>942_bases
ATGATTGGAAGCCGTGTGACGCAGGAAATATCGAGCAGCGATGCCAGACAGGCAGCGAAGGAATTCAGGATCGGCACGGC
CACCATTCCGGCCCGGCCGCTGGAGCCGGCGCTTTACCTCGTCGCCACCCCCATCGGCAATCTCGGCGATATCACCATCC
GCGCGTTGGAAACGCTGGCCTCGGCCGATGTTCTCGCCTGCGAGGATACCCGCGTCACCCGCATCCTGCTTGAACGATAT
GGCATCCGCACGCGCCCGCTCGCCTATCACGAACACAACGCAAACGAAGCGGGGCCGAAGCTCATCGCCGCGCTGGAGGC
CGGAAAATCCGTGGCGCTGGTATCGGATGCCGGAACGCCGCTGGTTTCCGACCCGGGTTATCGCCTCGGCCAGCTGGCAC
TCGAAGCCGGACACCGCGTTGTGCCGGTGCCGGGCGCCTCTGCACCGCTCGCCGCCCTTGTCGGGTCCGGCATGCCGAGC
GATGCCTTCCTCTTTGCGGGTTTCCTGCCAGTCAAGGATCGCGGCAAGCGCGACCGTTTTGCAGGGCTTGCGAAAATCCC
CGCAACCCTGATCTTCTTTGAATCGCCACGCCGTATCGGCGCGTCTCTCAAGGTGGCGTCGGAAGTGCTTGGCCGCGACC
GCCGCGCCGTGGTCTGCCGTGAGTTGACCAAGACTTTCGAAGAGTTCCGGCGCGGTACACTCGGCGAGCTTGCGGATTAT
TACGATGGCGACCGTGTGGTGAAGGGGGAGATCGTGCTGCTGGTGGAGCCGCCCTCCTATGATGAAATTCCTGATATCGA
GGATGTCGAGAAGCTCCTGAAGGATCTCGTCGCCACCATGTCCGCCGCCAAGGCTGCTGGCGAAGCGGCGAAGCTGACGG
GCCTGCCGCGCAAGGAGCTTTATCAAAGGCTGCTGGATATGAAGGACACGGATGGCCGTTGA

Upstream 100 bases:

>100_bases
ATGATCCACAGGTTGCGACAGCCGATGGAGCTTGTTCGCCGGTTTTCTATTGCCCATAAAGGGAAAAACCGGAACGACCG
GCCGGCAAGGTTCGGCCAGA

Downstream 100 bases:

>100_bases
CGGGCAGAGCAATAAAAGGCGGAAAGCCGAGCGACGCGGCCATGCCGCCGAATATTGGGCCGCACTTTATCTGTTGCTAA
AGGGATATCGCATCCTCGCC

Product: tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MIGSRVTQEISSSDARQAAKEFRIGTATIPARPLEPALYLVATPIGNLGDITIRALETLASADVLACEDTRVTRILLERY
GIRTRPLAYHEHNANEAGPKLIAALEAGKSVALVSDAGTPLVSDPGYRLGQLALEAGHRVVPVPGASAPLAALVGSGMPS
DAFLFAGFLPVKDRGKRDRFAGLAKIPATLIFFESPRRIGASLKVASEVLGRDRRAVVCRELTKTFEEFRRGTLGELADY
YDGDRVVKGEIVLLVEPPSYDEIPDIEDVEKLLKDLVATMSAAKAAGEAAKLTGLPRKELYQRLLDMKDTDGR

Sequences:

>Translated_313_residues
MIGSRVTQEISSSDARQAAKEFRIGTATIPARPLEPALYLVATPIGNLGDITIRALETLASADVLACEDTRVTRILLERY
GIRTRPLAYHEHNANEAGPKLIAALEAGKSVALVSDAGTPLVSDPGYRLGQLALEAGHRVVPVPGASAPLAALVGSGMPS
DAFLFAGFLPVKDRGKRDRFAGLAKIPATLIFFESPRRIGASLKVASEVLGRDRRAVVCRELTKTFEEFRRGTLGELADY
YDGDRVVKGEIVLLVEPPSYDEIPDIEDVEKLLKDLVATMSAAKAAGEAAKLTGLPRKELYQRLLDMKDTDGR
>Mature_313_residues
MIGSRVTQEISSSDARQAAKEFRIGTATIPARPLEPALYLVATPIGNLGDITIRALETLASADVLACEDTRVTRILLERY
GIRTRPLAYHEHNANEAGPKLIAALEAGKSVALVSDAGTPLVSDPGYRLGQLALEAGHRVVPVPGASAPLAALVGSGMPS
DAFLFAGFLPVKDRGKRDRFAGLAKIPATLIFFESPRRIGASLKVASEVLGRDRRAVVCRELTKTFEEFRRGTLGELADY
YDGDRVVKGEIVLLVEPPSYDEIPDIEDVEKLLKDLVATMSAAKAAGEAAKLTGLPRKELYQRLLDMKDTDGR

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=272, Percent_Identity=45.5882352941176, Blast_Score=216, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 33703; Mature: 33703

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGSRVTQEISSSDARQAAKEFRIGTATIPARPLEPALYLVATPIGNLGDITIRALETLA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH
SADVLACEDTRVTRILLERYGIRTRPLAYHEHNANEAGPKLIAALEAGKSVALVSDAGTP
CCCEEEECCHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCC
LVSDPGYRLGQLALEAGHRVVPVPGASAPLAALVGSGMPSDAFLFAGFLPVKDRGKRDRF
CCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHH
AGLAKIPATLIFFESPRRIGASLKVASEVLGRDRRAVVCRELTKTFEEFRRGTLGELADY
HHHHHCCEEEEEECCCHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
YDGDRVVKGEIVLLVEPPSYDEIPDIEDVEKLLKDLVATMSAAKAAGEAAKLTGLPRKEL
CCCCEEEECEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHH
YQRLLDMKDTDGR
HHHHHCCCCCCCC
>Mature Secondary Structure
MIGSRVTQEISSSDARQAAKEFRIGTATIPARPLEPALYLVATPIGNLGDITIRALETLA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH
SADVLACEDTRVTRILLERYGIRTRPLAYHEHNANEAGPKLIAALEAGKSVALVSDAGTP
CCCEEEECCHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCC
LVSDPGYRLGQLALEAGHRVVPVPGASAPLAALVGSGMPSDAFLFAGFLPVKDRGKRDRF
CCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHH
AGLAKIPATLIFFESPRRIGASLKVASEVLGRDRRAVVCRELTKTFEEFRRGTLGELADY
HHHHHCCEEEEEECCCHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
YDGDRVVKGEIVLLVEPPSYDEIPDIEDVEKLLKDLVATMSAAKAAGEAAKLTGLPRKEL
CCCCEEEECEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHH
YQRLLDMKDTDGR
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]