Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 15889912
Identifier: 15889912
GI number: 15889912
Start: 2640510
End: 2640998
Strand: Direct
Name: 15889912
Synonym: Atu2657
Alternate gene names: NA
Gene position: 2640510-2640998 (Clockwise)
Preceding gene: 159185310
Following gene: 15889913
Centisome position: 92.92
GC content: 56.03
Gene sequence:
>489_bases ATGTTCCAGCAAATACAGTCGTTCCTTCAGAACCTCGTCGGCCCGAATGCGGGTGATTTCAGCCCTGATGATCTGAGGGT AGCGGTTGCCGCCCTCTGTTTCCAGGTAATGGAAGCGGATGGCACGGTCTCGAAAAGCGAGCGTCACCGCCTGCGTGAAA TCCTGCATGAATATTACCATCTCGATGGCGGCAAGCTCGATGCCCTTCTCACCGCCGGTCAGGAGGCCGGCAAGGAGGCC GTCGATTATTACCGCTTCACCGCCGATATCCGCCGCCATCTCGATGAAGATCAGCGCGTGGAGCTTATTGGAATATTATG GGATATTGTTTACGCTGACGGCGAACGAAGCGAAATGGAAGATCATGTGATCTGGCGGGTAGCCGATCTGCTTGGTGTTT CCGTGCGCGACAGGGTTCTGCAACGTCAGCAGGCCGCCACGAGGTCCGGGCCCGCTGAAGAAAGCGAAAACGAAGACGAT GCTGTTTGA
Upstream 100 bases:
>100_bases CGTTTTTCGGTGGCGCGCCGGATGATCCGGGTGTCAAGAAATCCGGCGCGGAAGCCGAACCCAAGACCCGGCTCAAACTC TTCTGACCAACAGGCTATCG
Downstream 100 bases:
>100_bases CCCCTCCAGGCAACAGAGAGAACAACCTTCGCTGCTAGTCGTCCTGCATCAGGAACGCTCCACGCCTGGCCGCGTCGGCC AGATACTCGTGGAAAAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MFQQIQSFLQNLVGPNAGDFSPDDLRVAVAALCFQVMEADGTVSKSERHRLREILHEYYHLDGGKLDALLTAGQEAGKEA VDYYRFTADIRRHLDEDQRVELIGILWDIVYADGERSEMEDHVIWRVADLLGVSVRDRVLQRQQAATRSGPAEESENEDD AV
Sequences:
>Translated_162_residues MFQQIQSFLQNLVGPNAGDFSPDDLRVAVAALCFQVMEADGTVSKSERHRLREILHEYYHLDGGKLDALLTAGQEAGKEA VDYYRFTADIRRHLDEDQRVELIGILWDIVYADGERSEMEDHVIWRVADLLGVSVRDRVLQRQQAATRSGPAEESENEDD AV >Mature_162_residues MFQQIQSFLQNLVGPNAGDFSPDDLRVAVAALCFQVMEADGTVSKSERHRLREILHEYYHLDGGKLDALLTAGQEAGKEA VDYYRFTADIRRHLDEDQRVELIGILWDIVYADGERSEMEDHVIWRVADLLGVSVRDRVLQRQQAATRSGPAEESENEDD AV
Specific function: Unknown
COG id: COG4103
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18361; Mature: 18361
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQQIQSFLQNLVGPNAGDFSPDDLRVAVAALCFQVMEADGTVSKSERHRLREILHEYYH CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LDGGKLDALLTAGQEAGKEAVDYYRFTADIRRHLDEDQRVELIGILWDIVYADGERSEME CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH DHVIWRVADLLGVSVRDRVLQRQQAATRSGPAEESENEDDAV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MFQQIQSFLQNLVGPNAGDFSPDDLRVAVAALCFQVMEADGTVSKSERHRLREILHEYYH CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LDGGKLDALLTAGQEAGKEAVDYYRFTADIRRHLDEDQRVELIGILWDIVYADGERSEME CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH DHVIWRVADLLGVSVRDRVLQRQQAATRSGPAEESENEDDAV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA