Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is cyaA [H]
Identifier: 15889837
GI number: 15889837
Start: 2554576
End: 2556270
Strand: Direct
Name: cyaA [H]
Synonym: Atu2580
Alternate gene names: 15889837
Gene position: 2554576-2556270 (Clockwise)
Preceding gene: 159185275
Following gene: 159185277
Centisome position: 89.9
GC content: 57.58
Gene sequence:
>1695_bases ATGATCCGTTTCTTTTCGGAAACCAATTTAAGACGCGCCCGGATCGCATCCGGTCTCATCCTATTTGCTTTCGTTTTTTC CCACCTCTCCAATCATTCCCTTGCACTCATCTCCATCGACACGGCTGAACGGGCGCGGAAATGGTTCAGCTTGATTTGGC TTAATCCTGTCAGCAGCCTGCTTTTTTACGGGTCGGTCGTGGTGCATGTCTGCCTTGTACTGCGCTCGCTTTATCTGCGC AGGACATTGCGCATGCCGCTGCGCGAGGCGCTTCAGGTCATATTCGGACTGTCGATCCCGTTTCTGATCATCGGCCATGC GGTCAATATCCGCGCCTCACATATGCTTTATGGCATCGACGTCGGTTATTATTCCGTCATCCGGAGGCTGTGGATAAACA ATCCGGTCAGCGGAGCGTGGCAGAGCCTCGCGTTGATTGTCATCTGGACCCATGGATGCATCGGCCTCTATTTCTGGCTG CGTTATCGCGACTGGTATCCAAAAATCGCCGGGCTGTTCATGACGGTGGCTGTGATGCTGCCGCTTCTGGCCTTGCTGGG CTTCAGCGATGCGGGCCGCTGGCTGGAAGAGGTAGATCGGAAATATGCACTTCCTCCGGGGCTTACGGATAACACTATCC AGAGAGACGAACTGCCGCTGCAAAGGGAGATGGAAACGCGGATCCGGTTCATCACAGGTGCGACCGAGGCAATTTTCGCC GGCGCGGTGATGCTGGTCTTCGTTTTGCGTGGTGTGCGAAGCTTCCGGCAAAGGCTGACCGCGATTGAAATCCACTATGA ACAGGGCGTGCAGGCGCGTATTCCGGCCGGCTTCAGTATTCTGGAAGCCAGCAGGCTCGCGGGCATCCCGCATTACTCGG TCTGTGGCGGCAAGGGGCGCTGCTCGACCTGTCGCGTCAAGGTTCTGAACAGCAAGGGCCCGCTTCCGCCACCCGGAGAT ATCGAGCAGACCACGCTCCGGCGTATCCACGCCGATTCGGACGTGCGGCTCGGTTGTCAGTTGCGCCCCACCAGCGATCT CGACATCGCGCTTCTCGTTTCACCGCCCCAGCAAAGCGATCTGCCCGCGGATGCGCAGTCGGCCCGCCCCGGTCGGGAAG AGGAAATCGCCATTCTCTTCTGCGATCTGCGCAATTTCACCACGCTGTCGGAAGCGAAGCTGCCCTATGATGTGGTCTTC CTTTTGAACCGCTACTTCACCATCGTCGGCCAGGCCGTCGAACAGGCCGATGGTCATCTCGACAAATTCATCGGCGATGG CGCCATGGCCCTTTTTGGACTTGGCGAGGATACGGACCGGGCCTGCCGCAACGCCATGAAGGCAGCCGCAACCATATTGC GGGATATCGCCATCCTGAACGAAGGGTTGGAGAAACAATTCGCCGTCCGCCTGGAAGTGGTGGTTGGCATTCACTCCGGC CCGAGCATCGTCGGCGTGATGGGATATGGCGCGGCAAAAACCCTGACAGCCATAGGCGATACCGTGAATGTGGCAAGCCG GCTCGAATCCAAGGCCAAGGAATTCGGCGCCGCCATCGTCGTTTCCGAACCGGCCATCATCCAGGCAGGACAGGATATTG CCGATCTCAGAAGCGAAAACATCGCCATTCGCGGACGAAACTCGCAGATGAAAGTGTATCTGCTCTCAAGAGAAGAGAGC GAGCGTTATCTATGA
Upstream 100 bases:
>100_bases TATCCCGTTTTCCGCGTGGAAATTCGGCGAGACGACCTAAGATTAAGCCACCCGTATTGCATGATGATTCTATTCCGAAC GGCCATTTGATGGGATTTGC
Downstream 100 bases:
>100_bases GACAGTCACGGCGCTTTTGTCGTCGGGCGGTCCACCGTCAAATCTTGCGATAGAGAAAATAGCGATCCGTCGGCACGCTT TCCGGCACCGGCAGCGGTTT
Product: adenylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase; Adenylyl cyclase [H]
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MIRFFSETNLRRARIASGLILFAFVFSHLSNHSLALISIDTAERARKWFSLIWLNPVSSLLFYGSVVVHVCLVLRSLYLR RTLRMPLREALQVIFGLSIPFLIIGHAVNIRASHMLYGIDVGYYSVIRRLWINNPVSGAWQSLALIVIWTHGCIGLYFWL RYRDWYPKIAGLFMTVAVMLPLLALLGFSDAGRWLEEVDRKYALPPGLTDNTIQRDELPLQREMETRIRFITGATEAIFA GAVMLVFVLRGVRSFRQRLTAIEIHYEQGVQARIPAGFSILEASRLAGIPHYSVCGGKGRCSTCRVKVLNSKGPLPPPGD IEQTTLRRIHADSDVRLGCQLRPTSDLDIALLVSPPQQSDLPADAQSARPGREEEIAILFCDLRNFTTLSEAKLPYDVVF LLNRYFTIVGQAVEQADGHLDKFIGDGAMALFGLGEDTDRACRNAMKAAATILRDIAILNEGLEKQFAVRLEVVVGIHSG PSIVGVMGYGAAKTLTAIGDTVNVASRLESKAKEFGAAIVVSEPAIIQAGQDIADLRSENIAIRGRNSQMKVYLLSREES ERYL
Sequences:
>Translated_564_residues MIRFFSETNLRRARIASGLILFAFVFSHLSNHSLALISIDTAERARKWFSLIWLNPVSSLLFYGSVVVHVCLVLRSLYLR RTLRMPLREALQVIFGLSIPFLIIGHAVNIRASHMLYGIDVGYYSVIRRLWINNPVSGAWQSLALIVIWTHGCIGLYFWL RYRDWYPKIAGLFMTVAVMLPLLALLGFSDAGRWLEEVDRKYALPPGLTDNTIQRDELPLQREMETRIRFITGATEAIFA GAVMLVFVLRGVRSFRQRLTAIEIHYEQGVQARIPAGFSILEASRLAGIPHYSVCGGKGRCSTCRVKVLNSKGPLPPPGD IEQTTLRRIHADSDVRLGCQLRPTSDLDIALLVSPPQQSDLPADAQSARPGREEEIAILFCDLRNFTTLSEAKLPYDVVF LLNRYFTIVGQAVEQADGHLDKFIGDGAMALFGLGEDTDRACRNAMKAAATILRDIAILNEGLEKQFAVRLEVVVGIHSG PSIVGVMGYGAAKTLTAIGDTVNVASRLESKAKEFGAAIVVSEPAIIQAGQDIADLRSENIAIRGRNSQMKVYLLSREES ERYL >Mature_564_residues MIRFFSETNLRRARIASGLILFAFVFSHLSNHSLALISIDTAERARKWFSLIWLNPVSSLLFYGSVVVHVCLVLRSLYLR RTLRMPLREALQVIFGLSIPFLIIGHAVNIRASHMLYGIDVGYYSVIRRLWINNPVSGAWQSLALIVIWTHGCIGLYFWL RYRDWYPKIAGLFMTVAVMLPLLALLGFSDAGRWLEEVDRKYALPPGLTDNTIQRDELPLQREMETRIRFITGATEAIFA GAVMLVFVLRGVRSFRQRLTAIEIHYEQGVQARIPAGFSILEASRLAGIPHYSVCGGKGRCSTCRVKVLNSKGPLPPPGD IEQTTLRRIHADSDVRLGCQLRPTSDLDIALLVSPPQQSDLPADAQSARPGREEEIAILFCDLRNFTTLSEAKLPYDVVF LLNRYFTIVGQAVEQADGHLDKFIGDGAMALFGLGEDTDRACRNAMKAAATILRDIAILNEGLEKQFAVRLEVVVGIHSG PSIVGVMGYGAAKTLTAIGDTVNVASRLESKAKEFGAAIVVSEPAIIQAGQDIADLRSENIAIRGRNSQMKVYLLSREES ERYL
Specific function: May function as a membrane-localized receptor protein [H]
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HAMP domain [H]
Homologues:
Organism=Homo sapiens, GI4504217, Length=211, Percent_Identity=28.436018957346, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI222080083, Length=196, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI134152694, Length=208, Percent_Identity=25.9615384615385, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI167830411, Length=192, Percent_Identity=29.6875, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI4580422, Length=189, Percent_Identity=29.1005291005291, Blast_Score=68, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17561804, Length=212, Percent_Identity=27.8301886792453, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193207841, Length=232, Percent_Identity=28.8793103448276, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17534655, Length=177, Percent_Identity=31.638418079096, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17561800, Length=210, Percent_Identity=29.0476190476191, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17561802, Length=198, Percent_Identity=29.2929292929293, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193206632, Length=169, Percent_Identity=29.585798816568, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI212645052, Length=202, Percent_Identity=31.1881188118812, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17534657, Length=177, Percent_Identity=29.9435028248588, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17534659, Length=182, Percent_Identity=27.4725274725275, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71990146, Length=210, Percent_Identity=29.0476190476191, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17561794, Length=160, Percent_Identity=29.375, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI221330468, Length=267, Percent_Identity=25.0936329588015, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI221330470, Length=267, Percent_Identity=25.0936329588015, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI161076872, Length=187, Percent_Identity=26.7379679144385, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574512, Length=187, Percent_Identity=26.7379679144385, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI116008008, Length=185, Percent_Identity=25.4054054054054, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI62484298, Length=185, Percent_Identity=25.4054054054054, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI62484477, Length=185, Percent_Identity=25.4054054054054, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR003660 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00672 HAMP [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 62687; Mature: 62687
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: PS50125 GUANYLATE_CYCLASES_2 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFFSETNLRRARIASGLILFAFVFSHLSNHSLALISIDTAERARKWFSLIWLNPVSSL CEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH LFYGSVVVHVCLVLRSLYLRRTLRMPLREALQVIFGLSIPFLIIGHAVNIRASHMLYGID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECEEEEEEC VGYYSVIRRLWINNPVSGAWQSLALIVIWTHGCIGLYFWLRYRDWYPKIAGLFMTVAVML HHHHHHHHHHHCCCCCCHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLLALLGFSDAGRWLEEVDRKYALPPGLTDNTIQRDELPLQREMETRIRFITGATEAIFA HHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH GAVMLVFVLRGVRSFRQRLTAIEIHYEQGVQARIPAGFSILEASRLAGIPHYSVCGGKGR HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEECCCCHHHHHHHHHCCCCCCEECCCCCC CSTCRVKVLNSKGPLPPPGDIEQTTLRRIHADSDVRLGCQLRPTSDLDIALLVSPPQQSD CCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCC LPADAQSARPGREEEIAILFCDLRNFTTLSEAKLPYDVVFLLNRYFTIVGQAVEQADGHL CCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHH DKFIGDGAMALFGLGEDTDRACRNAMKAAATILRDIAILNEGLEKQFAVRLEVVVGIHSG HHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEEEEECCC PSIVGVMGYGAAKTLTAIGDTVNVASRLESKAKEFGAAIVVSEPAIIQAGQDIADLRSEN CCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCHHEECCCCHHHHCCCC IAIRGRNSQMKVYLLSREESERYL EEEEECCCCEEEEEEECCCCCCCC >Mature Secondary Structure MIRFFSETNLRRARIASGLILFAFVFSHLSNHSLALISIDTAERARKWFSLIWLNPVSSL CEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH LFYGSVVVHVCLVLRSLYLRRTLRMPLREALQVIFGLSIPFLIIGHAVNIRASHMLYGID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECEEEEEEC VGYYSVIRRLWINNPVSGAWQSLALIVIWTHGCIGLYFWLRYRDWYPKIAGLFMTVAVML HHHHHHHHHHHCCCCCCHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLLALLGFSDAGRWLEEVDRKYALPPGLTDNTIQRDELPLQREMETRIRFITGATEAIFA HHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH GAVMLVFVLRGVRSFRQRLTAIEIHYEQGVQARIPAGFSILEASRLAGIPHYSVCGGKGR HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEECCCCHHHHHHHHHCCCCCCEECCCCCC CSTCRVKVLNSKGPLPPPGDIEQTTLRRIHADSDVRLGCQLRPTSDLDIALLVSPPQQSD CCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCC LPADAQSARPGREEEIAILFCDLRNFTTLSEAKLPYDVVFLLNRYFTIVGQAVEQADGHL CCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHH DKFIGDGAMALFGLGEDTDRACRNAMKAAATILRDIAILNEGLEKQFAVRLEVVVGIHSG HHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEEEEECCC PSIVGVMGYGAAKTLTAIGDTVNVASRLESKAKEFGAAIVVSEPAIIQAGQDIADLRSEN CCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCHHEECCCCHHHHCCCC IAIRGRNSQMKVYLLSREESERYL EEEEECCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7601856 [H]