Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889789
Identifier: 15889789
GI number: 15889789
Start: 2495951
End: 2498275
Strand: Direct
Name: 15889789
Synonym: Atu2524
Alternate gene names: NA
Gene position: 2495951-2498275 (Clockwise)
Preceding gene: 15889788
Following gene: 159185255
Centisome position: 87.84
GC content: 51.74
Gene sequence:
>2325_bases GTGCTGCCGGCCTATACGACTTACGCCCTTTACAATCGCAATATGGAATCGTCGCTGAAACGCGTCGCGAATGATCCGAT CATATCGCGCGACGCCAAATATTACGCCGACAATATCGGCAAGGTAAAAAGCCTTGACGCGTTTCTGAAAGACTACAAGC TCTATTCTTACGCCATGAAAGCCCATGGCCTGGAAGAGATGACCTATGCAACCGCCTTCATGAAGAAGGTGCTGGAAAGC AATCTCAAGGATCCGAACAGTTTCGTTAACAAGCTGAAAGACACCCGCTACCGCGACTTCGCGGCAGCGTTTGATTTCGG TACGATCAAGACTGAAAAAACGGTTCAGACCAAGTCTCAACAGGACCGGCTGGTTACCGCCTATCATGACACAGACAAGC AACGGAACGAAGAACAGAAGGAAGAAACGCGTTATTACAACATTGTCATCGATAAGGTTGGCCAGGTGGATGACATTTTC AAAAATACGCGACTGCGGAATTATGTTTTCAAATCCTTCGGCATCGATCCCCAAACTTTCGACTACCAACATCTGAAAGG TGTTCTAACCAGCGATATCAGTAAGGCCGACAGCTACGTCAACAGCACCTATAAACCGCTGCTCGAAGAGTGGCAGGCCA AAATTGCCGATCTGCGCGACCAGCGTACAAAAATCCCTTCGACCGACAAAACGTCTCTCGAAAAAAACGATTATCTGATC AACCAGTATAACAAGCGTATCAATGGGGCCGCCAAGTTGTTCGAGCTGGCGGCAACGTTTAATTTCCGCGCCGACGGCCT TGTGAATGACGGCACGAAAGCGCAGACGGCTGTTCAGAAGCGGCTGACCAATGAAAACTATGTTCTGGCAAATCCCCGCG TCACGCAGACCGGCGCGATTCTAAACCGCGATTTTTTCGTGCAGGCGATGAAAGACGTAACGGATGCCGGACAGCTGACC GCCAATTCACGTCTGCGAACAATGTTGATCGTCGCCTTCAATCTTGAGGACAACAGCGGTACCGATCAGAAAATCCAGTG GGCTCTTCGGGAAAACCCCGCAGACCCACAGAGCGGACTTTATAGGGAAAAGGACAAAGGCTTCATCGATCTGGCGAAGG CCTTTAATTTTGGCACGGATGGCAAGGTCGCGGCCGGAAAAGCGGTCCAGAGCGATGGTCAGCTCAGCACGATAATGAAC CTCTACTTCAGCCGATACGACGACAAGCAGGAGGCAGCGGATGAAAAGACAATCAAGGATTACAGGCGCTACATCGGCCT CACTAAAAACCTTGATGACTTTCTGTCGGCGGCACCGGCAGCGGTTGCCATTCGCAACTTCGCGCTGAAGGCGTTCAACA TCGGCACTGAGGAAAGCTCCACGTTCAAGTTGAAAAAGGTCTTCACCAGCGACCTGTCGAACCCCAAAAGCTATGTGTAC ACCCTGAAGGACGATCGCTTTCTGCGGCTTGCCAAGGCTTTCAATTTTGATGCACAGGGCAAGATCGGCTCGCCGCGTTT CGCACAGGCAGAGAACGAAATAGCCCGTATCTCGCGAAATTATCTGAAAGAAGTCACCCGGTGGGACAAGGATAAAAAGA TCAGGGAGAAGGGAGAGAAGGAAGTCGGTTATTATCGCGAGAAAATGGGGACTTTGGAGACAGCCGATCAATTGCTCGCT GACCGGCGCCTGCTGGACTTCATGCTGGTTGCCGAGCGTATCGATCCGAAATCCATCACGACCGACTACCTGAAGAAGAT TTTCAAATCCGACCTCAAGGACCCCAAAAGCTTCGCCAATACGGAAAAAGACCCTCGTTTTCGCGCTCTTGCCGGCTCCT TCAACTTCGATGCCAAGGGAAATATCAGCGCAACAACCCGTCAGCCCATCCAGAACAATCGTAGCCTCATGGAAACGCGG GACAAGTATGTTCGACAGAAACTGGAGGAGCGGGCCGGAGAAGAAAATTCCGGTGTTCGGCTCGCGCTTTATTTCAAGCG GATGGCCGGCGGCATTTCCAGCGCTTATGACATATTGGCAGACAAGGCGCTGTCCGAAGTGACCCGCACAGCTCTTGGAA TTCCCGCAGAAACGGCAAATGCCAAGGTTGATGCGCAGGCGAAGATGATCGAGAAAAGGCTGAAGATAAAGGATCTGCAG GATCCGAAAAAAGTCGAGAAACTGGTCAATCGTTTTCTCATGACATTCGAAGCGAATAATTCCGGTTCCGACCCGCGCAT CGCTCTGTTCCGGCAGGGAAGCGCATCCATCAGTGGCAACACACTGGCCACTCTGGCGCAACTGCGCAGCGGACGCAGGG GCTGA
Upstream 100 bases:
>100_bases ATTATAAAAGTAATAATTCGAGAAATTCAGCCACGCACAAGTTAAATTGAGGACAGTCTAGATATTTATATATACAGCAT GAATTCTATCGGAGGCGCAT
Downstream 100 bases:
>100_bases CGGATTGTTTTTCTGAGACCGCATGTCCTGCCGCATTAGGTTTGCGATGGCCGCAGGTTCACGATCCTGCGGCCATAGCC TGTTATCAAACCCGTGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 774; Mature: 774
Protein sequence:
>774_residues MLPAYTTYALYNRNMESSLKRVANDPIISRDAKYYADNIGKVKSLDAFLKDYKLYSYAMKAHGLEEMTYATAFMKKVLES NLKDPNSFVNKLKDTRYRDFAAAFDFGTIKTEKTVQTKSQQDRLVTAYHDTDKQRNEEQKEETRYYNIVIDKVGQVDDIF KNTRLRNYVFKSFGIDPQTFDYQHLKGVLTSDISKADSYVNSTYKPLLEEWQAKIADLRDQRTKIPSTDKTSLEKNDYLI NQYNKRINGAAKLFELAATFNFRADGLVNDGTKAQTAVQKRLTNENYVLANPRVTQTGAILNRDFFVQAMKDVTDAGQLT ANSRLRTMLIVAFNLEDNSGTDQKIQWALRENPADPQSGLYREKDKGFIDLAKAFNFGTDGKVAAGKAVQSDGQLSTIMN LYFSRYDDKQEAADEKTIKDYRRYIGLTKNLDDFLSAAPAAVAIRNFALKAFNIGTEESSTFKLKKVFTSDLSNPKSYVY TLKDDRFLRLAKAFNFDAQGKIGSPRFAQAENEIARISRNYLKEVTRWDKDKKIREKGEKEVGYYREKMGTLETADQLLA DRRLLDFMLVAERIDPKSITTDYLKKIFKSDLKDPKSFANTEKDPRFRALAGSFNFDAKGNISATTRQPIQNNRSLMETR DKYVRQKLEERAGEENSGVRLALYFKRMAGGISSAYDILADKALSEVTRTALGIPAETANAKVDAQAKMIEKRLKIKDLQ DPKKVEKLVNRFLMTFEANNSGSDPRIALFRQGSASISGNTLATLAQLRSGRRG
Sequences:
>Translated_774_residues MLPAYTTYALYNRNMESSLKRVANDPIISRDAKYYADNIGKVKSLDAFLKDYKLYSYAMKAHGLEEMTYATAFMKKVLES NLKDPNSFVNKLKDTRYRDFAAAFDFGTIKTEKTVQTKSQQDRLVTAYHDTDKQRNEEQKEETRYYNIVIDKVGQVDDIF KNTRLRNYVFKSFGIDPQTFDYQHLKGVLTSDISKADSYVNSTYKPLLEEWQAKIADLRDQRTKIPSTDKTSLEKNDYLI NQYNKRINGAAKLFELAATFNFRADGLVNDGTKAQTAVQKRLTNENYVLANPRVTQTGAILNRDFFVQAMKDVTDAGQLT ANSRLRTMLIVAFNLEDNSGTDQKIQWALRENPADPQSGLYREKDKGFIDLAKAFNFGTDGKVAAGKAVQSDGQLSTIMN LYFSRYDDKQEAADEKTIKDYRRYIGLTKNLDDFLSAAPAAVAIRNFALKAFNIGTEESSTFKLKKVFTSDLSNPKSYVY TLKDDRFLRLAKAFNFDAQGKIGSPRFAQAENEIARISRNYLKEVTRWDKDKKIREKGEKEVGYYREKMGTLETADQLLA DRRLLDFMLVAERIDPKSITTDYLKKIFKSDLKDPKSFANTEKDPRFRALAGSFNFDAKGNISATTRQPIQNNRSLMETR DKYVRQKLEERAGEENSGVRLALYFKRMAGGISSAYDILADKALSEVTRTALGIPAETANAKVDAQAKMIEKRLKIKDLQ DPKKVEKLVNRFLMTFEANNSGSDPRIALFRQGSASISGNTLATLAQLRSGRRG >Mature_774_residues MLPAYTTYALYNRNMESSLKRVANDPIISRDAKYYADNIGKVKSLDAFLKDYKLYSYAMKAHGLEEMTYATAFMKKVLES NLKDPNSFVNKLKDTRYRDFAAAFDFGTIKTEKTVQTKSQQDRLVTAYHDTDKQRNEEQKEETRYYNIVIDKVGQVDDIF KNTRLRNYVFKSFGIDPQTFDYQHLKGVLTSDISKADSYVNSTYKPLLEEWQAKIADLRDQRTKIPSTDKTSLEKNDYLI NQYNKRINGAAKLFELAATFNFRADGLVNDGTKAQTAVQKRLTNENYVLANPRVTQTGAILNRDFFVQAMKDVTDAGQLT ANSRLRTMLIVAFNLEDNSGTDQKIQWALRENPADPQSGLYREKDKGFIDLAKAFNFGTDGKVAAGKAVQSDGQLSTIMN LYFSRYDDKQEAADEKTIKDYRRYIGLTKNLDDFLSAAPAAVAIRNFALKAFNIGTEESSTFKLKKVFTSDLSNPKSYVY TLKDDRFLRLAKAFNFDAQGKIGSPRFAQAENEIARISRNYLKEVTRWDKDKKIREKGEKEVGYYREKMGTLETADQLLA DRRLLDFMLVAERIDPKSITTDYLKKIFKSDLKDPKSFANTEKDPRFRALAGSFNFDAKGNISATTRQPIQNNRSLMETR DKYVRQKLEERAGEENSGVRLALYFKRMAGGISSAYDILADKALSEVTRTALGIPAETANAKVDAQAKMIEKRLKIKDLQ DPKKVEKLVNRFLMTFEANNSGSDPRIALFRQGSASISGNTLATLAQLRSGRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88026; Mature: 88026
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPAYTTYALYNRNMESSLKRVANDPIISRDAKYYADNIGKVKSLDAFLKDYKLYSYAMK CCCCCEEHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AHGLEEMTYATAFMKKVLESNLKDPNSFVNKLKDTRYRDFAAAFDFGTIKTEKTVQTKSQ HCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC QDRLVTAYHDTDKQRNEEQKEETRYYNIVIDKVGQVDDIFKNTRLRNYVFKSFGIDPQTF CCCEEEEECCCCHHHHHHHHHHHHHHEEEEHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC DYQHLKGVLTSDISKADSYVNSTYKPLLEEWQAKIADLRDQRTKIPSTDKTSLEKNDYLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH NQYNKRINGAAKLFELAATFNFRADGLVNDGTKAQTAVQKRLTNENYVLANPRVTQTGAI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCEECCCHH LNRDFFVQAMKDVTDAGQLTANSRLRTMLIVAFNLEDNSGTDQKIQWALRENPADPQSGL HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCC YREKDKGFIDLAKAFNFGTDGKVAAGKAVQSDGQLSTIMNLYFSRYDDKQEAADEKTIKD CCCCCCCHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH YRRYIGLTKNLDDFLSAAPAAVAIRNFALKAFNIGTEESSTFKLKKVFTSDLSNPKSYVY HHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCEEE TLKDDRFLRLAKAFNFDAQGKIGSPRFAQAENEIARISRNYLKEVTRWDKDKKIREKGEK EECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCH EVGYYREKMGTLETADQLLADRRLLDFMLVAERIDPKSITTDYLKKIFKSDLKDPKSFAN HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHC TEKDPRFRALAGSFNFDAKGNISATTRQPIQNNRSLMETRDKYVRQKLEERAGEENSGVR CCCCCCHHEEECCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCE LALYFKRMAGGISSAYDILADKALSEVTRTALGIPAETANAKVDAQAKMIEKRLKIKDLQ EEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC DPKKVEKLVNRFLMTFEANNSGSDPRIALFRQGSASISGNTLATLAQLRSGRRG CHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MLPAYTTYALYNRNMESSLKRVANDPIISRDAKYYADNIGKVKSLDAFLKDYKLYSYAMK CCCCCEEHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AHGLEEMTYATAFMKKVLESNLKDPNSFVNKLKDTRYRDFAAAFDFGTIKTEKTVQTKSQ HCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC QDRLVTAYHDTDKQRNEEQKEETRYYNIVIDKVGQVDDIFKNTRLRNYVFKSFGIDPQTF CCCEEEEECCCCHHHHHHHHHHHHHHEEEEHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC DYQHLKGVLTSDISKADSYVNSTYKPLLEEWQAKIADLRDQRTKIPSTDKTSLEKNDYLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH NQYNKRINGAAKLFELAATFNFRADGLVNDGTKAQTAVQKRLTNENYVLANPRVTQTGAI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCEECCCHH LNRDFFVQAMKDVTDAGQLTANSRLRTMLIVAFNLEDNSGTDQKIQWALRENPADPQSGL HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCC YREKDKGFIDLAKAFNFGTDGKVAAGKAVQSDGQLSTIMNLYFSRYDDKQEAADEKTIKD CCCCCCCHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH YRRYIGLTKNLDDFLSAAPAAVAIRNFALKAFNIGTEESSTFKLKKVFTSDLSNPKSYVY HHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCEEE TLKDDRFLRLAKAFNFDAQGKIGSPRFAQAENEIARISRNYLKEVTRWDKDKKIREKGEK EECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCH EVGYYREKMGTLETADQLLADRRLLDFMLVAERIDPKSITTDYLKKIFKSDLKDPKSFAN HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHC TEKDPRFRALAGSFNFDAKGNISATTRQPIQNNRSLMETRDKYVRQKLEERAGEENSGVR CCCCCCHHEEECCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCE LALYFKRMAGGISSAYDILADKALSEVTRTALGIPAETANAKVDAQAKMIEKRLKIKDLQ EEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC DPKKVEKLVNRFLMTFEANNSGSDPRIALFRQGSASISGNTLATLAQLRSGRRG CHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA