The gene/protein map for NC_003062 is currently unavailable.
Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15889273

Identifier: 15889273

GI number: 15889273

Start: 1947376

End: 1947807

Strand: Direct

Name: 15889273

Synonym: Atu1981

Alternate gene names: NA

Gene position: 1947376-1947807 (Clockwise)

Preceding gene: 15889272

Following gene: 159185000

Centisome position: 68.53

GC content: 58.1

Gene sequence:

>432_bases
ATGAAGACCTATCTTGTCGCCTATTTCTTCACTCTCGTTGCCTTTCTGGTGATCGATTTCATCTGGCTGAGCACCATGGC
GTCGCGACTTTATCGGCCGGCCATCGGCGATCTTCTGGCGGATAATTTCCGCCTTGCCCCGGCGATCGTCTTTTATCTGA
TCTACGCCGCAGGCCTCACTTTTCTCGCCGTGCGCCCGGCTCTGATTTCGGGCGAATGGACCACGGCTCTGCTTTATGGC
GCTGCGGTCGGCTTCATGGCCTATGCCACCTATGACCTCACCAATCAGGCGACGTTGAAGAACTGGTCCACCACCCTGAC
TGTTGCCGATCTACTGTGGGGAACCTTCGTGTCCGCGGCAGCAGCCGTCATCGGTTATCTCGTCACGGTGCGCCTGGTCG
GCCCGCTTGAAAACTCGGCGGGCCTGTCATGA

Upstream 100 bases:

>100_bases
AAAGGCTGCATCGTCGCCGGCCTGCTATGCAAGGGCATAAGCTGGACCAGGATCGACTAGCGCTCGCCGCTTTCTCAATG
CCTCGTAAAGGAAAACACTG

Downstream 100 bases:

>100_bases
CACTTGTCATAAGCTGCGGCTTGCACTCGACGCTAAAAGGGCGCGTCTATAGCGAAGACCCCAAGCATCTCTTGTCTTCC
TCCGAAAGACGACCCTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKTYLVAYFFTLVAFLVIDFIWLSTMASRLYRPAIGDLLADNFRLAPAIVFYLIYAAGLTFLAVRPALISGEWTTALLYG
AAVGFMAYATYDLTNQATLKNWSTTLTVADLLWGTFVSAAAAVIGYLVTVRLVGPLENSAGLS

Sequences:

>Translated_143_residues
MKTYLVAYFFTLVAFLVIDFIWLSTMASRLYRPAIGDLLADNFRLAPAIVFYLIYAAGLTFLAVRPALISGEWTTALLYG
AAVGFMAYATYDLTNQATLKNWSTTLTVADLLWGTFVSAAAAVIGYLVTVRLVGPLENSAGLS
>Mature_143_residues
MKTYLVAYFFTLVAFLVIDFIWLSTMASRLYRPAIGDLLADNFRLAPAIVFYLIYAAGLTFLAVRPALISGEWTTALLYG
AAVGFMAYATYDLTNQATLKNWSTTLTVADLLWGTFVSAAAAVIGYLVTVRLVGPLENSAGLS

Specific function: Unknown

COG id: COG4852

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15551; Mature: 15551

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTYLVAYFFTLVAFLVIDFIWLSTMASRLYRPAIGDLLADNFRLAPAIVFYLIYAAGLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FLAVRPALISGEWTTALLYGAAVGFMAYATYDLTNQATLKNWSTTLTVADLLWGTFVSAA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAVIGYLVTVRLVGPLENSAGLS
HHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKTYLVAYFFTLVAFLVIDFIWLSTMASRLYRPAIGDLLADNFRLAPAIVFYLIYAAGLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FLAVRPALISGEWTTALLYGAAVGFMAYATYDLTNQATLKNWSTTLTVADLLWGTFVSAA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAVIGYLVTVRLVGPLENSAGLS
HHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA