Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888527
Identifier: 15888527
GI number: 15888527
Start: 1182710
End: 1183300
Strand: Direct
Name: 15888527
Synonym: Atu1190
Alternate gene names: NA
Gene position: 1182710-1183300 (Clockwise)
Preceding gene: 159184658
Following gene: 15888528
Centisome position: 41.62
GC content: 56.35
Gene sequence:
>591_bases ATGCGTTTCTATGCCGCTTGTCTGGCGAGTTATAACAATGGCGTTCTGCATGGTCGGTGGATCGATGCGAGTTCTGACAC TGACGAGATGCAGGAAGAGGTTTCCGCCATGCTGCGCGCAAGCCGGTTTCCCAACGTCATGGTGAAATGCCCCAACTGTG AAGGCCGCTTGGAGCTTTGCACGGTCTGCGATGGCGGTTCTCGTGAAGTTCCCAGCGCCGAAGAATGGGCCATTCATGAT TATGATGGTCTTCCGTCCTCTCTCGGTGAATATCCCGGCCTTGATAAAATCGCCGCGTTTGTCGAGCTTTGCGAAGAGCA CGACATGACCGGCGAAGACATGGCCGCTATCGTCTCGCATTTCGGCTCGGTTGAGTACGCTAAGGAAGAGCTGGGAAACA ACTTCGTTGGCGTCCACGAGAGCTTCCGCGCTTACGCCGAGGAACTGGCGGACGAGATGCTGAGCGCCCACGATATCAAG GCCGATCACCCGCTTTCGCAGTATTTCGACTACGAGGCATACGCCCGCGACCTCAGGCATTCTGCAAGCGCTGTTGAGCT TGACGAGGGCGTGGCGGTTTTCTGTGTCTAG
Upstream 100 bases:
>100_bases ACCCTATAGCGAAGGGACTTCACAGTCGAAAGGCTGTGAAGCTCCTGCATCTTATTCAAACCCTCACATGCCCGCAAGGG CGATAGCGAAGGAGTGAGAG
Downstream 100 bases:
>100_bases ATCAATCCACATGTGGAAAGTAATGCGAAACCGGGTGTCGCTTCGGCTGGCCTCCGGTCGTCCTAGGGTCGCGCCTAGGG CCTGATGAGCAGCGCACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Antirestriction Protein Family Protein; Antirestriction ArdA Family Protein
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MRFYAACLASYNNGVLHGRWIDASSDTDEMQEEVSAMLRASRFPNVMVKCPNCEGRLELCTVCDGGSREVPSAEEWAIHD YDGLPSSLGEYPGLDKIAAFVELCEEHDMTGEDMAAIVSHFGSVEYAKEELGNNFVGVHESFRAYAEELADEMLSAHDIK ADHPLSQYFDYEAYARDLRHSASAVELDEGVAVFCV
Sequences:
>Translated_196_residues MRFYAACLASYNNGVLHGRWIDASSDTDEMQEEVSAMLRASRFPNVMVKCPNCEGRLELCTVCDGGSREVPSAEEWAIHD YDGLPSSLGEYPGLDKIAAFVELCEEHDMTGEDMAAIVSHFGSVEYAKEELGNNFVGVHESFRAYAEELADEMLSAHDIK ADHPLSQYFDYEAYARDLRHSASAVELDEGVAVFCV >Mature_196_residues MRFYAACLASYNNGVLHGRWIDASSDTDEMQEEVSAMLRASRFPNVMVKCPNCEGRLELCTVCDGGSREVPSAEEWAIHD YDGLPSSLGEYPGLDKIAAFVELCEEHDMTGEDMAAIVSHFGSVEYAKEELGNNFVGVHESFRAYAEELADEMLSAHDIK ADHPLSQYFDYEAYARDLRHSASAVELDEGVAVFCV
Specific function: Unknown
COG id: COG4734
COG function: function code R; Antirestriction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21735; Mature: 21735
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFYAACLASYNNGVLHGRWIDASSDTDEMQEEVSAMLRASRFPNVMVKCPNCEGRLELC CHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEE TVCDGGSREVPSAEEWAIHDYDGLPSSLGEYPGLDKIAAFVELCEEHDMTGEDMAAIVSH EEECCCCCCCCCCCCCEECCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH FGSVEYAKEELGNNFVGVHESFRAYAEELADEMLSAHDIKADHPLSQYFDYEAYARDLRH HCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHH SASAVELDEGVAVFCV CCCCEECCCCEEEEEC >Mature Secondary Structure MRFYAACLASYNNGVLHGRWIDASSDTDEMQEEVSAMLRASRFPNVMVKCPNCEGRLELC CHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEE TVCDGGSREVPSAEEWAIHDYDGLPSSLGEYPGLDKIAAFVELCEEHDMTGEDMAAIVSH EEECCCCCCCCCCCCCEECCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH FGSVEYAKEELGNNFVGVHESFRAYAEELADEMLSAHDIKADHPLSQYFDYEAYARDLRH HCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHH SASAVELDEGVAVFCV CCCCEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA