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The map label for this gene is 15888364

Identifier: 15888364

GI number: 15888364

Start: 1013942

End: 1015039

Strand: Direct

Name: 15888364

Synonym: Atu1021

Alternate gene names: NA

Gene position: 1013942-1015039 (Clockwise)

Preceding gene: 15888362

Following gene: 159184581

Centisome position: 35.68

GC content: 57.38

Gene sequence:

>1098_bases
ATGAACATCAAGAGCCTTCTTATCGGCTCCGCTGCAGCTCTCGCAGCAGTATCCGGCGCTCACGCTGCCGACGCCATCGT
CGCTGCCGAGCCCGAGCCCCTGGAATATGTTCGCGTCTGCGACGCTTTCGGCACCGGCTTCTTCTACATTCCTGGCACCG
AAACCTGCCTGAAGTTCAGCGGTTACGTTCGTTTCCAGACCAACTTCGGCCGCGATCAGTCCGGCACGTCGGACTGGAAT
TCGTTTACCCGCGCTCAGTTCAACGTTGACACCCGCACCGATACCGAACTCGGCGCCCTGCGTGGTTTCATCGAATTCCG
TGCTGATGCAGGCAACGGTCAGTCCAGCTCTTCTGGTCTTGAAGCTCGTCAGGCATTCATCGAACTTGGTGGCCTGCGCG
TCGGCAAGTTCTACAGCTGGTGGGATGACGATCTCTCTGGCGAGACCGATCTTCTTTCGTCCAATACGCTCTTCAACTCC
ATCCGTTATACCTACGACACCGGTTCGTTCTGGGCTGGTATCTCGGTTGACGAACTTGAGGGCACCGGCAGCCAGTTCGC
AACCATCACTGGTGCAGCTGACCCGGTTACCGGTCTGTTCCCGCTGTCCCAGGAGCCTGATAACAATGTCGGCATCACGG
CTGGCGTTGGCGGAAAGTTCGGCGCTGCTACTCTTCAGCTGATCGGTTCTTACGACGTTGATCAGGAAGAAGGCGCTATC
CGCGCAATGGTATTCGCGGATATCGGACCTGGCACCCTTGGACTTGCTGGTGTTTGGGCATCTGGCCCCAACGCTTACTA
CGCTCTGTCCGAATGGACGGTTGCTGCTGAATACGCGATCAAGGCAACCGACCGCCTGACGATCACCCCGGCAGTGCAGT
ATCTCGGCAATGTTGGCGACAAGATCACTGTCGTGAACACCGGTGCAACGGCAATCGTTTCGAACGACTGGTCTAATCGC
GACGCATGGACCGCCGGCGCAACGATCGACTACAAGATCACCGATGGTCTGAGCACCAAGATCACTGCAAACTACTACGA
CGAAGACGGTCAGGACGATCAGGTCACCGGTTTCGTCCGCCTTCAGCGCGACTTTTAA

Upstream 100 bases:

>100_bases
TGCGCAGTTTTAGCTCTAATCAGGTTCATAAGCGGCACGCATTTCTGAGTGCTTTCCCACCCGCTGCTTAGAAGATTAAG
CGTTTGACTGGAGGTCAACC

Downstream 100 bases:

>100_bases
TCTGATCTGACGCAGTCAGTGAAGGAAACCCCGGCAGAGATGCCGGGGTTTTTTCATTTGGGGGCCCAGAGGCAATGCGA
CGTGTCGTCTGACTGTTGAA

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MNIKSLLIGSAAALAAVSGAHAADAIVAAEPEPLEYVRVCDAFGTGFFYIPGTETCLKFSGYVRFQTNFGRDQSGTSDWN
SFTRAQFNVDTRTDTELGALRGFIEFRADAGNGQSSSSGLEARQAFIELGGLRVGKFYSWWDDDLSGETDLLSSNTLFNS
IRYTYDTGSFWAGISVDELEGTGSQFATITGAADPVTGLFPLSQEPDNNVGITAGVGGKFGAATLQLIGSYDVDQEEGAI
RAMVFADIGPGTLGLAGVWASGPNAYYALSEWTVAAEYAIKATDRLTITPAVQYLGNVGDKITVVNTGATAIVSNDWSNR
DAWTAGATIDYKITDGLSTKITANYYDEDGQDDQVTGFVRLQRDF

Sequences:

>Translated_365_residues
MNIKSLLIGSAAALAAVSGAHAADAIVAAEPEPLEYVRVCDAFGTGFFYIPGTETCLKFSGYVRFQTNFGRDQSGTSDWN
SFTRAQFNVDTRTDTELGALRGFIEFRADAGNGQSSSSGLEARQAFIELGGLRVGKFYSWWDDDLSGETDLLSSNTLFNS
IRYTYDTGSFWAGISVDELEGTGSQFATITGAADPVTGLFPLSQEPDNNVGITAGVGGKFGAATLQLIGSYDVDQEEGAI
RAMVFADIGPGTLGLAGVWASGPNAYYALSEWTVAAEYAIKATDRLTITPAVQYLGNVGDKITVVNTGATAIVSNDWSNR
DAWTAGATIDYKITDGLSTKITANYYDEDGQDDQVTGFVRLQRDF
>Mature_365_residues
MNIKSLLIGSAAALAAVSGAHAADAIVAAEPEPLEYVRVCDAFGTGFFYIPGTETCLKFSGYVRFQTNFGRDQSGTSDWN
SFTRAQFNVDTRTDTELGALRGFIEFRADAGNGQSSSSGLEARQAFIELGGLRVGKFYSWWDDDLSGETDLLSSNTLFNS
IRYTYDTGSFWAGISVDELEGTGSQFATITGAADPVTGLFPLSQEPDNNVGITAGVGGKFGAATLQLIGSYDVDQEEGAI
RAMVFADIGPGTLGLAGVWASGPNAYYALSEWTVAAEYAIKATDRLTITPAVQYLGNVGDKITVVNTGATAIVSNDWSNR
DAWTAGATIDYKITDGLSTKITANYYDEDGQDDQVTGFVRLQRDF

Specific function: May act as an outer membrane pore [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alphaproteobacteria porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003684 [H]

Pfam domain/function: PF02530 Porin_2 [H]

EC number: NA

Molecular weight: Translated: 38933; Mature: 38933

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKSLLIGSAAALAAVSGAHAADAIVAAEPEPLEYVRVCDAFGTGFFYIPGTETCLKFS
CCHHHHHHCCHHHHHHHCCCCHHCEEEECCCCCHHHHHHHHHHCCCEEEECCCHHEEEEC
GYVRFQTNFGRDQSGTSDWNSFTRAQFNVDTRTDTELGALRGFIEFRADAGNGQSSSSGL
CEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHEEEEEEECCCCCCCCCCHH
EARQAFIELGGLRVGKFYSWWDDDLSGETDLLSSNTLFNSIRYTYDTGSFWAGISVDELE
HHHHHHHHHCCEEEECEEEECCCCCCCCCCEECCCCEEEEEEEEEECCCEEECCCHHHCC
GTGSQFATITGAADPVTGLFPLSQEPDNNVGITAGVGGKFGAATLQLIGSYDVDQEEGAI
CCCCCEEEEECCCCCCCEEECCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCE
RAMVFADIGPGTLGLAGVWASGPNAYYALSEWTVAAEYAIKATDRLTITPAVQYLGNVGD
EEEEEEECCCCCEEEEEEEECCCCEEEEEECEEEEEEEEEEECCEEEECHHHHHHHCCCC
KITVVNTGATAIVSNDWSNRDAWTAGATIDYKITDGLSTKITANYYDEDGQDDQVTGFVR
EEEEEECCCEEEEECCCCCCCCEEECCEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEE
LQRDF
EEECC
>Mature Secondary Structure
MNIKSLLIGSAAALAAVSGAHAADAIVAAEPEPLEYVRVCDAFGTGFFYIPGTETCLKFS
CCHHHHHHCCHHHHHHHCCCCHHCEEEECCCCCHHHHHHHHHHCCCEEEECCCHHEEEEC
GYVRFQTNFGRDQSGTSDWNSFTRAQFNVDTRTDTELGALRGFIEFRADAGNGQSSSSGL
CEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHEEEEEEECCCCCCCCCCHH
EARQAFIELGGLRVGKFYSWWDDDLSGETDLLSSNTLFNSIRYTYDTGSFWAGISVDELE
HHHHHHHHHCCEEEECEEEECCCCCCCCCCEECCCCEEEEEEEEEECCCEEECCCHHHCC
GTGSQFATITGAADPVTGLFPLSQEPDNNVGITAGVGGKFGAATLQLIGSYDVDQEEGAI
CCCCCEEEEECCCCCCCEEECCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCE
RAMVFADIGPGTLGLAGVWASGPNAYYALSEWTVAAEYAIKATDRLTITPAVQYLGNVGD
EEEEEEECCCCCEEEEEEEECCCCEEEEEECEEEEEEEEEEECCEEEECHHHHHHHCCCC
KITVVNTGATAIVSNDWSNRDAWTAGATIDYKITDGLSTKITANYYDEDGQDDQVTGFVR
EEEEEECCCEEEEECCCCCCCCEEECCEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEE
LQRDF
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]