Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888359
Identifier: 15888359
GI number: 15888359
Start: 1010508
End: 1010849
Strand: Reverse
Name: 15888359
Synonym: Atu8146
Alternate gene names: NA
Gene position: 1010849-1010508 (Counterclockwise)
Preceding gene: 159184579
Following gene: 15888356
Centisome position: 35.57
GC content: 58.48
Gene sequence:
>342_bases ATGGCTCAGACCAAACTGAATGTTGTCGAAGACACGATCGAAAACCAGATTGCCGAGTTGCGCTCGCAAATCTCGTCGCT TTCGAAATCCGTTTCCGCCCGCGCCGAAGGTGTGAGCGAAGATGCGTCCGAATTTCTGGACGAGGCACGCGGCCGGGTTC GCAAGGCTGCCCATAATGTTCGCGCCCAGGGCCAGAACGTTGTGGAAGCCGTGAAGGAAAATCCGGGTACGGCAACCTCG CTGCTGACGATCGTCGGCGCACTCGGTTTTGCGATCGGTTATGTGGTGGGCACGAGCACACAGCAGAGCTCGTCCAACAG CAGCCTGTATCGCTGGCGCTGA
Upstream 100 bases:
>100_bases AACCTGTTGGGCAAATAGGGCTCCGTGAAACTTTGCAGGCAATTCGGGAACTTCTTGCAGGCCGACACGTTCTGGCTTCG GTAACAGAAGAGGTGTTCTA
Downstream 100 bases:
>100_bases TCGCCGTATAAATTGAAGTTCAGGCAAGGCGGGTCTCACCTGCCTTGCCTTTACCTATTGGGATAAAGCGCAGGAAAATG GGGGCGAATATGCGGTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MAQTKLNVVEDTIENQIAELRSQISSLSKSVSARAEGVSEDASEFLDEARGRVRKAAHNVRAQGQNVVEAVKENPGTATS LLTIVGALGFAIGYVVGTSTQQSSSNSSLYRWR
Sequences:
>Translated_113_residues MAQTKLNVVEDTIENQIAELRSQISSLSKSVSARAEGVSEDASEFLDEARGRVRKAAHNVRAQGQNVVEAVKENPGTATS LLTIVGALGFAIGYVVGTSTQQSSSNSSLYRWR >Mature_112_residues AQTKLNVVEDTIENQIAELRSQISSLSKSVSARAEGVSEDASEFLDEARGRVRKAAHNVRAQGQNVVEAVKENPGTATSL LTIVGALGFAIGYVVGTSTQQSSSNSSLYRWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12097; Mature: 11965
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTKLNVVEDTIENQIAELRSQISSLSKSVSARAEGVSEDASEFLDEARGRVRKAAHNV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RAQGQNVVEAVKENPGTATSLLTIVGALGFAIGYVVGTSTQQSSSNSSLYRWR HHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AQTKLNVVEDTIENQIAELRSQISSLSKSVSARAEGVSEDASEFLDEARGRVRKAAHNV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RAQGQNVVEAVKENPGTATSLLTIVGALGFAIGYVVGTSTQQSSSNSSLYRWR HHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA