Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888150
Identifier: 15888150
GI number: 15888150
Start: 807277
End: 808197
Strand: Direct
Name: 15888150
Synonym: Atu0806
Alternate gene names: NA
Gene position: 807277-808197 (Clockwise)
Preceding gene: 159184472
Following gene: 17934721
Centisome position: 28.41
GC content: 63.63
Gene sequence:
>921_bases ATGACTGTGCGTTTCGTCCGGCCTTTTTCGGTGGCAGCCTATCTTTCCCGCTATCTCGGTCTTGCGGCGCTGGCGCTTTT TCTTGTCGCCGCCGGCATCCATCGCTTCGGGCCGTTGACGACGCCGGATCTTGTCGGGCTGCTCATCATTGCCGCCGGCA TTGCTCTCGTGGCCGTGCTTCTGGCGCTGATCGGCCTGGAGCGGCTGTGGACCACGGGCGCGCGCGGCGGGCTTTCGGCG CTGGCCGCGCTGCTTCTCTCCGCCCTGCCACTCGGCGTCGTTGGTTATGGTGCCTTTCTTTATTGGCAGCAGCCGAAGAT TTACGACATTTCCACTGATCTGACCGACGTGCCGGAATGGCTGGCCACACCCGCCGCCAACCAGCAATGGCTGGTGCGGC CGGTGGCCGTGACGAAAGCCGACCGCGATGCGCAGATGGAGGCTTATGCGAGCCTAGCCGGCCGTCGTTATGAAGGTGCA ATCGACCGTATCTATGCCGCCGCCAAAAAAATGGCCGCAGCCCAGTCCATCCGCATTATCCATACGAAGGGTGTGATCGG CGCGGAAGATGCCCCCTCCGTCGGCGTGCCGCCGCAGGACAGGACGCAGCCCACGGAAGATGCGCCGGTGGAAGACCTGC CCTCCATCGTGCCCGTGCCCATGGCCCGCCCGGCAGAAGCGCCGCAGCCCACCTTCTTTAATGGCAGTGGCGTGGTGCTG ATGCAGGGCGAAACCCGCACCCGCGTCTGGGGCCTGCGTTTCGATATCCTCATCCGGCTCAAGGAAGAGGCGGAAACCAC CATCGTCGACGTGCGTGTGGCCTCCCGCTACGGCCCGCATGATCTCGGCATGGGTGCGGTGATTGCCGAGGCTTATCTCG ATGCGCTGGATGCGGAAATGCAAGGGTTGAACGACAATTGA
Upstream 100 bases:
>100_bases CGCCGCAAATCCGGTCTATGACATCATATGCAGGTGATTCCCTGCCAGAATTCGGGTGCAACGCTTTCAAGCCAATGCGA TCTAACGGATATCCGCTTCC
Downstream 100 bases:
>100_bases GTTCGTGACGCCGAAAGCTTGGCTGCCGCTAAGCTTCGGCAAGATTGGGGCTTTGCATCGCCTCTGTTTCTTCTCCCCGC CCGGGAGAAGAACAGGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTVRFVRPFSVAAYLSRYLGLAALALFLVAAGIHRFGPLTTPDLVGLLIIAAGIALVAVLLALIGLERLWTTGARGGLSA LAALLLSALPLGVVGYGAFLYWQQPKIYDISTDLTDVPEWLATPAANQQWLVRPVAVTKADRDAQMEAYASLAGRRYEGA IDRIYAAAKKMAAAQSIRIIHTKGVIGAEDAPSVGVPPQDRTQPTEDAPVEDLPSIVPVPMARPAEAPQPTFFNGSGVVL MQGETRTRVWGLRFDILIRLKEEAETTIVDVRVASRYGPHDLGMGAVIAEAYLDALDAEMQGLNDN
Sequences:
>Translated_306_residues MTVRFVRPFSVAAYLSRYLGLAALALFLVAAGIHRFGPLTTPDLVGLLIIAAGIALVAVLLALIGLERLWTTGARGGLSA LAALLLSALPLGVVGYGAFLYWQQPKIYDISTDLTDVPEWLATPAANQQWLVRPVAVTKADRDAQMEAYASLAGRRYEGA IDRIYAAAKKMAAAQSIRIIHTKGVIGAEDAPSVGVPPQDRTQPTEDAPVEDLPSIVPVPMARPAEAPQPTFFNGSGVVL MQGETRTRVWGLRFDILIRLKEEAETTIVDVRVASRYGPHDLGMGAVIAEAYLDALDAEMQGLNDN >Mature_305_residues TVRFVRPFSVAAYLSRYLGLAALALFLVAAGIHRFGPLTTPDLVGLLIIAAGIALVAVLLALIGLERLWTTGARGGLSAL AALLLSALPLGVVGYGAFLYWQQPKIYDISTDLTDVPEWLATPAANQQWLVRPVAVTKADRDAQMEAYASLAGRRYEGAI DRIYAAAKKMAAAQSIRIIHTKGVIGAEDAPSVGVPPQDRTQPTEDAPVEDLPSIVPVPMARPAEAPQPTFFNGSGVVLM QGETRTRVWGLRFDILIRLKEEAETTIVDVRVASRYGPHDLGMGAVIAEAYLDALDAEMQGLNDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32798; Mature: 32667
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRFVRPFSVAAYLSRYLGLAALALFLVAAGIHRFGPLTTPDLVGLLIIAAGIALVAVL CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LALIGLERLWTTGARGGLSALAALLLSALPLGVVGYGAFLYWQQPKIYDISTDLTDVPEW HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCCHHHHHHH LATPAANQQWLVRPVAVTKADRDAQMEAYASLAGRRYEGAIDRIYAAAKKMAAAQSIRII HCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEE HTKGVIGAEDAPSVGVPPQDRTQPTEDAPVEDLPSIVPVPMARPAEAPQPTFFNGSGVVL EECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEECCCCEEE MQGETRTRVWGLRFDILIRLKEEAETTIVDVRVASRYGPHDLGMGAVIAEAYLDALDAEM EECCCCCEEEEEEEEEEEEEHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH QGLNDN CCCCCC >Mature Secondary Structure TVRFVRPFSVAAYLSRYLGLAALALFLVAAGIHRFGPLTTPDLVGLLIIAAGIALVAVL CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LALIGLERLWTTGARGGLSALAALLLSALPLGVVGYGAFLYWQQPKIYDISTDLTDVPEW HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCCHHHHHHH LATPAANQQWLVRPVAVTKADRDAQMEAYASLAGRRYEGAIDRIYAAAKKMAAAQSIRII HCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEE HTKGVIGAEDAPSVGVPPQDRTQPTEDAPVEDLPSIVPVPMARPAEAPQPTFFNGSGVVL EECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEECCCCEEE MQGETRTRVWGLRFDILIRLKEEAETTIVDVRVASRYGPHDLGMGAVIAEAYLDALDAEM EECCCCCEEEEEEEEEEEEEHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH QGLNDN CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA