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The map label for this gene is flbT

Identifier: 15887923

GI number: 15887923

Start: 563199

End: 563648

Strand: Direct

Name: flbT

Synonym: Atu0578

Alternate gene names: 15887923

Gene position: 563199-563648 (Clockwise)

Preceding gene: 15887922

Following gene: 15887924

Centisome position: 19.82

GC content: 54.89

Gene sequence:

>450_bases
ATGAAAAGTACACTTCGAATCTCGCTGAAATCGGGCGAAAAGATTTTCATCAACGGCGCGGTTCTGCGTGTGGATCGCAA
GGTGGCGCTGGAATTCCTGAACGATGTCACGTTCCTGCTTGAAAACCACGTTCTGCAGCCCGACCAGGCGACGACGCCGC
TCCGGCAGCTTTATTTCATCGCGCAGATGATCCTCATCAACCCGGAAGGGCGCGAGCAATCCACCAACATGTTCCGCAAG
TCCGTGAGCATGCTGCTCAATTGCTTCCAGCATGACGAGATTCTGGCGGAACTGAAGCGGATCGACGGGCTGGTTGCCTC
CGGCAAGGCTTTCGAAGCGCTGAAGGCCATTCGCGGTCTCTACACGATCGAGGAAAAAATCCTCAGCAATCAGGAAATGA
CCCCGGCAACGATCGAACAGATTCGTAAGGAGATCGCACCATGGCGGTAG

Upstream 100 bases:

>100_bases
CGATCTGGATTTTGAAAGAGTGCGAACTGATCCGGAAACGTCAGTCGACGAATTTCCAGGGCATAATTGACGTGACAACC
ATCATCAGGGATGGACTGAA

Downstream 100 bases:

>100_bases
ATGCAGTCAACTCGGCAGCCGCTAACCCCTGGGCCAATGCCGGGGCGAGCAGCAGTGACAAGAATGCGGCCTCGCTGAAC
TATGACAGCTTCCTGAAGCT

Product: flagellar biosynthesis repressor FlbT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKSTLRISLKSGEKIFINGAVLRVDRKVALEFLNDVTFLLENHVLQPDQATTPLRQLYFIAQMILINPEGREQSTNMFRK
SVSMLLNCFQHDEILAELKRIDGLVASGKAFEALKAIRGLYTIEEKILSNQEMTPATIEQIRKEIAPWR

Sequences:

>Translated_149_residues
MKSTLRISLKSGEKIFINGAVLRVDRKVALEFLNDVTFLLENHVLQPDQATTPLRQLYFIAQMILINPEGREQSTNMFRK
SVSMLLNCFQHDEILAELKRIDGLVASGKAFEALKAIRGLYTIEEKILSNQEMTPATIEQIRKEIAPWR
>Mature_149_residues
MKSTLRISLKSGEKIFINGAVLRVDRKVALEFLNDVTFLLENHVLQPDQATTPLRQLYFIAQMILINPEGREQSTNMFRK
SVSMLLNCFQHDEILAELKRIDGLVASGKAFEALKAIRGLYTIEEKILSNQEMTPATIEQIRKEIAPWR

Specific function: Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation

COG id: COG5443

COG function: function code N; Flagellar biosynthesis regulator FlbT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flbT family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLBT_AGRT5 (Q8UHV1)

Other databases:

- EMBL:   AE007869
- PIR:   AE2647
- PIR:   D97429
- RefSeq:   NP_353604.1
- STRING:   Q8UHV1
- GeneID:   1132616
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu0578
- eggNOG:   COG5443
- HOGENOM:   HBG660673
- OMA:   MILINPE
- ProtClustDB:   PRK00794
- BioCyc:   ATUM176299-1:ATU0578-MONOMER
- HAMAP:   MF_00783
- InterPro:   IPR009967
- InterPro:   IPR016006
- PIRSF:   PIRSF009533

Pfam domain/function: PF07378 FlbT

EC number: NA

Molecular weight: Translated: 17059; Mature: 17059

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTLRISLKSGEKIFINGAVLRVDRKVALEFLNDVTFLLENHVLQPDQATTPLRQLYFI
CCCCEEEEECCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AQMILINPEGREQSTNMFRKSVSMLLNCFQHDEILAELKRIDGLVASGKAFEALKAIRGL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YTIEEKILSNQEMTPATIEQIRKEIAPWR
HHHHHHHHCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSTLRISLKSGEKIFINGAVLRVDRKVALEFLNDVTFLLENHVLQPDQATTPLRQLYFI
CCCCEEEEECCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AQMILINPEGREQSTNMFRKSVSMLLNCFQHDEILAELKRIDGLVASGKAFEALKAIRGL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YTIEEKILSNQEMTPATIEQIRKEIAPWR
HHHHHHHHCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194