Click here to switch to the map view.

The map label for this gene is motB [H]

Identifier: 15887914

GI number: 15887914

Start: 553440

End: 554741

Strand: Direct

Name: motB [H]

Synonym: Atu0569

Alternate gene names: 15887914

Gene position: 553440-554741 (Clockwise)

Preceding gene: 15887913

Following gene: 15887915

Centisome position: 19.48

GC content: 61.6

Gene sequence:

>1302_bases
ATGAGTGAAGGCGAAAATCACCACCACGGCAAGAACGAGATCATCATCGTCAAGCGCCACAAGGGCGGGCACGATGGCGC
CCATGGCGGCGCCTGGAAGATCGCCTATGCCGACTTCATGACGGCGATGATGGCGTTCTTCCTCGTCATGTGGCTGGTCA
ATGCCGCCAATGAGGAGACCAAGGCCTCGGTCGCCAGCTATTTCAACCCGATAAAGCTGTCCGACGAGAAACCCTCGTCC
AAGGGACTGGAAAAGCCTGCCGATAAGGAAGAGGGCGTCCAGAAGAAGGACCAGTCCAACATCCAGGCGGAGAAGGTGAC
CAAGGGCTCCGCCGCGGCGACGGGCGAAGATCTGACATCGCAGACGGGCGAACAGTCGAATTTCTCCGAGGCCGACTTTT
TCGAAAACCCCTATTCCGTGTTGGCGGAAATCGCCCAGCAGGTCGGGCAGCAGGCCAATGTCAGCGCCAAGGGCGAGGGC
GGTGCGGCCGATTCCGGCCCGGCGACCGGTGCAAGCGGCGGCGAAGCCTATCGCGATCCCTTCGATCCGGATTTCTGGAC
GCAGCAGGTGAAAATCACCCGCGCCGATCAGAAGCAGGTTCCCTCAGAGGCCGCGCAGGCTGCCGATGGCAAACAGCAGG
ATGTGGCGGCCAAGGAGGCCGATAAGAGCGCTGAGGCAGTTACTCTCGTGCAGGCCGGTAAGCCCGCCGACAAGGCGGAA
GATGGCAAGTCGATGGAAATCGCGGCGGTGGTGCCGCAGCAGCGCCCGGATGCCGCCGAGCAGGCCGCGCTTGCCAAGCC
CAATCCGGACCAGGCAAGCAAAGCCAGCGATGCCGAATGGGAAAAGGCCGATACACTGCGCGAAGAAATCGAGAAGCAGA
TATCCGGCATCACCGGCAAGCTTTCCGAGGGACTGGTGGTGACGCCGGCCGAAGGCGGATTGCTGCTGACCATTTCCGAC
CAGGCGGAGACGCCGATGTTCAATATCGGATCGGCCGTTCCCCGGGGTGAGCTGGTTCTGGCCATGGAAAAGATCGGCAA
GTTGCTGCAGGAGCGCGGCGGTAGCGTGGTGATCCGCGGCCATACCGATGGCCGGCAGTTCAAGGGTGAGGCCAATGACA
ACTGGCGTCTTTCCATGGATCGTGCCCATAGCGCCTATTACATGCTGGTGCGCGGCGGCCTCTCGGAAGAACGGGTGAAA
CAGGTTTCGGGTTTTGCGGACCGCAGATTGCAGGTGCCGTCGAACCCTCTCGCGGATGCCAATCGCCGTATCGAAATCCT
GCTTGAGGCTGATCGGGGGTGA

Upstream 100 bases:

>100_bases
TTACCGAGACCGCCGATATCGATCTTTCGATCGAGTTGGGTGAAAGCGTGTTCGTGACGCGCATGTCCGCCTGGGCATCC
AGTCTTCGCAAGGTGATGAA

Downstream 100 bases:

>100_bases
GTGTGACGAAAACCTCGAAACGCTGGCTTCTTCTTGCGGCGACGCTTTGCGGTCTCGGCTCCGAGCCGAGCAAGGCGTTT
TCGCAGTCGCAAGACAATCT

Product: flagellar motor protein MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MSEGENHHHGKNEIIIVKRHKGGHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEETKASVASYFNPIKLSDEKPSS
KGLEKPADKEEGVQKKDQSNIQAEKVTKGSAAATGEDLTSQTGEQSNFSEADFFENPYSVLAEIAQQVGQQANVSAKGEG
GAADSGPATGASGGEAYRDPFDPDFWTQQVKITRADQKQVPSEAAQAADGKQQDVAAKEADKSAEAVTLVQAGKPADKAE
DGKSMEIAAVVPQQRPDAAEQAALAKPNPDQASKASDAEWEKADTLREEIEKQISGITGKLSEGLVVTPAEGGLLLTISD
QAETPMFNIGSAVPRGELVLAMEKIGKLLQERGGSVVIRGHTDGRQFKGEANDNWRLSMDRAHSAYYMLVRGGLSEERVK
QVSGFADRRLQVPSNPLADANRRIEILLEADRG

Sequences:

>Translated_433_residues
MSEGENHHHGKNEIIIVKRHKGGHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEETKASVASYFNPIKLSDEKPSS
KGLEKPADKEEGVQKKDQSNIQAEKVTKGSAAATGEDLTSQTGEQSNFSEADFFENPYSVLAEIAQQVGQQANVSAKGEG
GAADSGPATGASGGEAYRDPFDPDFWTQQVKITRADQKQVPSEAAQAADGKQQDVAAKEADKSAEAVTLVQAGKPADKAE
DGKSMEIAAVVPQQRPDAAEQAALAKPNPDQASKASDAEWEKADTLREEIEKQISGITGKLSEGLVVTPAEGGLLLTISD
QAETPMFNIGSAVPRGELVLAMEKIGKLLQERGGSVVIRGHTDGRQFKGEANDNWRLSMDRAHSAYYMLVRGGLSEERVK
QVSGFADRRLQVPSNPLADANRRIEILLEADRG
>Mature_432_residues
SEGENHHHGKNEIIIVKRHKGGHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEETKASVASYFNPIKLSDEKPSSK
GLEKPADKEEGVQKKDQSNIQAEKVTKGSAAATGEDLTSQTGEQSNFSEADFFENPYSVLAEIAQQVGQQANVSAKGEGG
AADSGPATGASGGEAYRDPFDPDFWTQQVKITRADQKQVPSEAAQAADGKQQDVAAKEADKSAEAVTLVQAGKPADKAED
GKSMEIAAVVPQQRPDAAEQAALAKPNPDQASKASDAEWEKADTLREEIEKQISGITGKLSEGLVVTPAEGGLLLTISDQ
AETPMFNIGSAVPRGELVLAMEKIGKLLQERGGSVVIRGHTDGRQFKGEANDNWRLSMDRAHSAYYMLVRGGLSEERVKQ
VSGFADRRLQVPSNPLADANRRIEILLEADRG

Specific function: Probable integral membrane protein required for the rotation of the flagellar motor. Might be a linker that fastens the torque-generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=55, Percent_Identity=60, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 46414; Mature: 46283

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEGENHHHGKNEIIIVKRHKGGHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEET
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHH
KASVASYFNPIKLSDEKPSSKGLEKPADKEEGVQKKDQSNIQAEKVTKGSAAATGEDLTS
HHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHH
QTGEQSNFSEADFFENPYSVLAEIAQQVGQQANVSAKGEGGAADSGPATGASGGEAYRDP
CCCCCCCCCCCHHCCCHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FDPDFWTQQVKITRADQKQVPSEAAQAADGKQQDVAAKEADKSAEAVTLVQAGKPADKAE
CCCCHHHHEEEEEECHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCC
DGKSMEIAAVVPQQRPDAAEQAALAKPNPDQASKASDAEWEKADTLREEIEKQISGITGK
CCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
LSEGLVVTPAEGGLLLTISDQAETPMFNIGSAVPRGELVLAMEKIGKLLQERGGSVVIRG
CCCCEEEEECCCCEEEEECCCCCCCCEECCCCCCCCCEEHHHHHHHHHHHHCCCEEEEEE
HTDGRQFKGEANDNWRLSMDRAHSAYYMLVRGGLSEERVKQVSGFADRRLQVPSNPLADA
CCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHCEEECCCCCCCCC
NRRIEILLEADRG
CCEEEEEEECCCC
>Mature Secondary Structure 
SEGENHHHGKNEIIIVKRHKGGHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEET
CCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHH
KASVASYFNPIKLSDEKPSSKGLEKPADKEEGVQKKDQSNIQAEKVTKGSAAATGEDLTS
HHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHH
QTGEQSNFSEADFFENPYSVLAEIAQQVGQQANVSAKGEGGAADSGPATGASGGEAYRDP
CCCCCCCCCCCHHCCCHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FDPDFWTQQVKITRADQKQVPSEAAQAADGKQQDVAAKEADKSAEAVTLVQAGKPADKAE
CCCCHHHHEEEEEECHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCC
DGKSMEIAAVVPQQRPDAAEQAALAKPNPDQASKASDAEWEKADTLREEIEKQISGITGK
CCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
LSEGLVVTPAEGGLLLTISDQAETPMFNIGSAVPRGELVLAMEKIGKLLQERGGSVVIRG
CCCCEEEEECCCCEEEEECCCCCCCCEECCCCCCCCCEEHHHHHHHHHHHHCCCEEEEEE
HTDGRQFKGEANDNWRLSMDRAHSAYYMLVRGGLSEERVKQVSGFADRRLQVPSNPLADA
CCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHCEEECCCCCCCCC
NRRIEILLEADRG
CCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739; 8501040 [H]