Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887823
Identifier: 15887823
GI number: 15887823
Start: 465100
End: 465423
Strand: Direct
Name: 15887823
Synonym: Atu0477
Alternate gene names: NA
Gene position: 465100-465423 (Clockwise)
Preceding gene: 15887822
Following gene: 159184329
Centisome position: 16.37
GC content: 61.73
Gene sequence:
>324_bases ATGGTCGGGGAAACGACTGAGGAGGATGGCATGGATCTTACTTCGATATTGGCCCAGATTGTCGGCGGTGCGGTGGGCGG CACGGCTGGTGGAAAGATACTGAAGGATTCCGATCTTGGCTCGCTCGGTAATCTGATTGCCGGCGCCATTGGCGGGATCG GCGGCGGAACCGTACTTGGATCGCTGCTCGGCACTGCGGGCACTGCGGCCGCTGGCGGCGTGGATATCGGCGCTCTTGCC GGCCAGCTCGTTGGCGGCGGTGTCGGCGGTCTGATCGTCCAGATCATCGTCGGCCTGATCAAGAACAAGCTTGTGGCCAA ATAG
Upstream 100 bases:
>100_bases GGCGCCGTGGTCTGGAAAATTTTCGGCGAGGAAGAAAAGGCTGGCCATGCCGGCTCGGTTCAACCCGCGAAGACGTGAAT AAGAGGCTTTGTTTCCCCGA
Downstream 100 bases:
>100_bases GCGATTGAGCCGCCTTTAGATAAAATGACGGACCTTGCCGGAGGAAGAGCTTCGTTCGGCAAGGTGGGTTGATGTTACAC GCATTGATGGCAGTGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MVGETTEEDGMDLTSILAQIVGGAVGGTAGGKILKDSDLGSLGNLIAGAIGGIGGGTVLGSLLGTAGTAAAGGVDIGALA GQLVGGGVGGLIVQIIVGLIKNKLVAK
Sequences:
>Translated_107_residues MVGETTEEDGMDLTSILAQIVGGAVGGTAGGKILKDSDLGSLGNLIAGAIGGIGGGTVLGSLLGTAGTAAAGGVDIGALA GQLVGGGVGGLIVQIIVGLIKNKLVAK >Mature_107_residues MVGETTEEDGMDLTSILAQIVGGAVGGTAGGKILKDSDLGSLGNLIAGAIGGIGGGTVLGSLLGTAGTAAAGGVDIGALA GQLVGGGVGGLIVQIIVGLIKNKLVAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9881; Mature: 9881
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: PS00318 HMG_COA_REDUCTASE_2 ; PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGETTEEDGMDLTSILAQIVGGAVGGTAGGKILKDSDLGSLGNLIAGAIGGIGGGTVLG CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCHHHHHH SLLGTAGTAAAGGVDIGALAGQLVGGGVGGLIVQIIVGLIKNKLVAK HHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVGETTEEDGMDLTSILAQIVGGAVGGTAGGKILKDSDLGSLGNLIAGAIGGIGGGTVLG CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCHHHHHH SLLGTAGTAAAGGVDIGALAGQLVGGGVGGLIVQIIVGLIKNKLVAK HHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA