Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is aqpZ
Identifier: 15887822
GI number: 15887822
Start: 464352
End: 465077
Strand: Direct
Name: aqpZ
Synonym: Atu0476
Alternate gene names: 15887822
Gene position: 464352-465077 (Clockwise)
Preceding gene: 159184327
Following gene: 15887823
Centisome position: 16.34
GC content: 59.23
Gene sequence:
>726_bases ATGAGTCGCAAGTTTATCTCGGAATTTTTGGGTACTTTTTGGCTCGTGTTCGGAGGTTGCGGCAGTGCGGTTTTTGCCGC CGCTTTTCCTGAACTCGGCATCGGCTTCCTTGGTGTTGCTTTCGCTTTTGGCTTGACGGTTCTGACCATGGCCTATGCGG TTGGCGGCATTTCCGGCGGTCACTTCAATCCGGCGGTTTCCGTCGGCCTCACCGTTGCCGGCAAATTCCCGGCGGCGAAC CTCGTGCCTTACATCGTGGCGCAGGTTCTGGGGGCGGTCGTCGCGGCTGCGGCGCTTTATGTTATTCTCACCGGCAAGGC GGGTGCCGAAATCGGCGGTTTTGCCGCCAATGGTTATGGCGAGCATTCGCCGGGCGGATATTCTCTCCTGTCGGCGCTGC TGATCGAGATCATCCTGACGGCGTTTTTCCTGGTTGTCATATTGGGGTCGACGCATGGCAGGGTGCCGGTCGGTTTCGCA CCTGTCGCCATCGGTCTTGCACTCACCCTTATTCATCTGATTTCCATTCCGGTCACCAACACATCCGTCAATCCGGCCCG CTCGACCGGGCAGGCCCTGTTCGTTGGCGGGTGGGCGCTGCAGCAGCTCTGGTTGTTCTGGCTTGCCCCAATTTTGGGCG GTGCCATTGGCGCCGTGGTCTGGAAAATTTTCGGCGAGGAAGAAAAGGCTGGCCATGCCGGCTCGGTTCAACCCGCGAAG ACGTGA
Upstream 100 bases:
>100_bases CGTGATCAAGCCGCTCTCCGAGTGTATATGCAATTTAGCTTGACTACGATTAAATTGCACGTAATAGTTGATGCAGTCGT AACATGAATGGGGAAGTGTT
Downstream 100 bases:
>100_bases ATAAGAGGCTTTGTTTCCCCGAATGGTCGGGGAAACGACTGAGGAGGATGGCATGGATCTTACTTCGATATTGGCCCAGA TTGTCGGCGGTGCGGTGGGC
Product: aquaporin Z
Products: H2O [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSRKFISEFLGTFWLVFGGCGSAVFAAAFPELGIGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAAN LVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGRVPVGFA PVAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPILGGAIGAVVWKIFGEEEKAGHAGSVQPAK T
Sequences:
>Translated_241_residues MSRKFISEFLGTFWLVFGGCGSAVFAAAFPELGIGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAAN LVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGRVPVGFA PVAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPILGGAIGAVVWKIFGEEEKAGHAGSVQPAK T >Mature_240_residues SRKFISEFLGTFWLVFGGCGSAVFAAAFPELGIGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANL VPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGRVPVGFAP VAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPILGGAIGAVVWKIFGEEEKAGHAGSVQPAKT
Specific function: Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response
COG id: COG0580
COG function: function code G; Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP/aquaporin (TC 1.A.8) family
Homologues:
Organism=Homo sapiens, GI37694062, Length=226, Percent_Identity=34.9557522123894, Blast_Score=111, Evalue=5e-25, Organism=Homo sapiens, GI4502183, Length=218, Percent_Identity=36.697247706422, Blast_Score=104, Evalue=7e-23, Organism=Homo sapiens, GI4502179, Length=224, Percent_Identity=35.2678571428571, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI4755125, Length=213, Percent_Identity=32.3943661971831, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI4502181, Length=213, Percent_Identity=32.3943661971831, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI6912506, Length=222, Percent_Identity=34.2342342342342, Blast_Score=98, Evalue=6e-21, Organism=Homo sapiens, GI86792455, Length=223, Percent_Identity=30.9417040358744, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI157266307, Length=236, Percent_Identity=31.7796610169492, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI22538420, Length=244, Percent_Identity=28.6885245901639, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI45446752, Length=201, Percent_Identity=32.8358208955224, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI4502187, Length=244, Percent_Identity=26.6393442622951, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI4826645, Length=245, Percent_Identity=28.1632653061224, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1787101, Length=209, Percent_Identity=71.2918660287081, Blast_Score=287, Evalue=4e-79, Organism=Escherichia coli, GI1790362, Length=242, Percent_Identity=29.7520661157025, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71993722, Length=235, Percent_Identity=33.1914893617021, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71992966, Length=259, Percent_Identity=29.7297297297297, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17558372, Length=242, Percent_Identity=29.7520661157025, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71994009, Length=241, Percent_Identity=28.2157676348548, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71992961, Length=257, Percent_Identity=26.8482490272374, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17531429, Length=232, Percent_Identity=28.8793103448276, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17531431, Length=232, Percent_Identity=28.8793103448276, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6321054, Length=201, Percent_Identity=30.3482587064677, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6325450, Length=228, Percent_Identity=27.6315789473684, Blast_Score=63, Evalue=4e-11, Organism=Drosophila melanogaster, GI24652747, Length=238, Percent_Identity=34.8739495798319, Blast_Score=120, Evalue=7e-28, Organism=Drosophila melanogaster, GI45551084, Length=238, Percent_Identity=34.8739495798319, Blast_Score=120, Evalue=7e-28, Organism=Drosophila melanogaster, GI24652751, Length=222, Percent_Identity=35.1351351351351, Blast_Score=94, Evalue=9e-20, Organism=Drosophila melanogaster, GI19922038, Length=222, Percent_Identity=35.1351351351351, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI17136672, Length=233, Percent_Identity=30.0429184549356, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI45550503, Length=228, Percent_Identity=27.1929824561404, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24762344, Length=226, Percent_Identity=30.9734513274336, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24762346, Length=226, Percent_Identity=30.9734513274336, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24762348, Length=226, Percent_Identity=30.9734513274336, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI20130305, Length=226, Percent_Identity=30.9734513274336, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24762342, Length=232, Percent_Identity=26.2931034482759, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AQPZ1_AGRT5 (Q8UI24)
Other databases:
- EMBL: AE007869 - PIR: AI2634 - PIR: G97416 - RefSeq: NP_353503.1 - ProteinModelPortal: Q8UI24 - SMR: Q8UI24 - STRING: Q8UI24 - GeneID: 1132514 - GenomeReviews: AE007869_GR - KEGG: atu:Atu0476 - eggNOG: COG0580 - HOGENOM: HBG705794 - OMA: LYLIELV - PhylomeDB: Q8UI24 - ProtClustDB: PRK05420 - BioCyc: ATUM176299-1:ATU0476-MONOMER - HAMAP: MF_01146 - InterPro: IPR012269 - InterPro: IPR000425 - InterPro: IPR022357 - PANTHER: PTHR19139 - PRINTS: PR00783 - TIGRFAMs: TIGR00861
Pfam domain/function: PF00230 MIP
EC number: NA
Molecular weight: Translated: 24544; Mature: 24413
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00221 MIP; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc4c77d4)-; HASH(0xbf44d4c)-; HASH(0xc1e6a9c)-; HASH(0xccd79b4)-; HASH(0xcfaf7f4)-; HASH(0xccfd7c0)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKFISEFLGTFWLVFGGCGSAVFAAAFPELGIGFLGVAFAFGLTVLTMAYAVGGISGG CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYG CCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCC EHSPGGYSLLSALLIEIILTAFFLVVILGSTHGRVPVGFAPVAIGLALTLIHLISIPVTN CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC TSVNPARSTGQALFVGGWALQQLWLFWLAPILGGAIGAVVWKIFGEEEKAGHAGSVQPAK CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC T H >Mature Secondary Structure SRKFISEFLGTFWLVFGGCGSAVFAAAFPELGIGFLGVAFAFGLTVLTMAYAVGGISGG CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYG CCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCC EHSPGGYSLLSALLIEIILTAFFLVVILGSTHGRVPVGFAPVAIGLALTLIHLISIPVTN CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC TSVNPARSTGQALFVGGWALQQLWLFWLAPILGGAIGAVVWKIFGEEEKAGHAGSVQPAK CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC T H
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O [Periplasm] [C]
Specific reaction: H2O [Periplasm] = H2O [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194