Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887601
Identifier: 15887601
GI number: 15887601
Start: 249269
End: 250252
Strand: Direct
Name: 15887601
Synonym: Atu0251
Alternate gene names: NA
Gene position: 249269-250252 (Clockwise)
Preceding gene: 15887598
Following gene: 15887604
Centisome position: 8.77
GC content: 60.06
Gene sequence:
>984_bases ATGTTTCGCAGTCTTTTTTCCCTGTCCAAACGCCCTTTTTCCTCACTCGGCGAACAGGAAATCCTGGCACTCGCCATTTC GTCCGAAGAGGACGATTCCCGTATATACCGCTCCTATGCCGATCACCTTCGCGCGCAATATCCACAATCGGCCAAAGTTT TCGAGGATATGGCCGAGGTCGAGCAGCAGCATCGGAATGTCCTGATCGACATGCATCGCCGTCGTTTCGGCGAAACCATT CCGCTGATCCGTCGCGAACATGTGCGCGGTTTTTACGAACGCACGCCGGACTGGCTGGTGAAGAACCTGTCGCTCGAGAA AATCCGCGCCCAGGCCGAATTGATGGAAGCGCAGGCGATCCGCTTTTACGATGAGGCCGTCAAGCGCACCACCGATGCAT CCACCCGCAAGCTCCTGGGTGATCTGGCCGAGGCGGAACGGGGTCATGAAGACATCGCCCAAATGCTGGAGGAAAAACAT CTTGATGAGGGCGGCCGCACGGAAGAGGAGGAAACCGCCAAGCGGCAGTTCCTTCTGACCTATGTGCAGCCGGGCCTTGC CGGCCTTATGGACGGCTCCGTCTCGACGCTGGCGCCGATCTTCGCGGCGGCCTTTGCCACACAGGATACGTGGCAGACCT TCCTGATCGGTCTTTCCGCCTCGGTCGGTGCGGGTATCTCCATGGGCTTTACGGAGGCCGCTCATGACGACGGCAAGCTT TCCGGCCGTGGATCACCGTTGAAGCGCGGCCTGGCGTCGGGCATCATGACGGCCGTTGGCGGTCTCGGCCACGCGCTGCC CTATCTCATCCCGCATTTCTGGACGGCCACGGCGATTGCCGCCATCGTCGTTTTTGTGGAACTCTGGGCCATTGCCTTCA TTCAGAACCGCTTCATGGAAACGCCGTTCCTGCGGGCGGTGTTTCAGGTGGTGCTGGGTGGCTCGCTGGTGCTGGCGGCC GGCATTATCATCGGCAACGCGTGA
Upstream 100 bases:
>100_bases GCTGCAATGCGACCTATTGCCTTGTTAGAATTATTCTAAAACGACTTGATCTCGACACGAGGCGGATGTATTTAGAATTA TTCTAAAAAAGGTTTGAACC
Downstream 100 bases:
>100_bases AAAAAAAGAAAGAGCCCGCGATGGCGGGCTCAATCAGAATTCTATCAGACTTGGAATTTGAGTGTCAGCGCAACGCGCCG ACCAGAACGTCGCGACCATC
Product: hypothetical protein
Products: NA
Alternate protein names: Rubrerythrin Subfamily; Transmembrane Protein; Ferritin-Like Protein
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MFRSLFSLSKRPFSSLGEQEILALAISSEEDDSRIYRSYADHLRAQYPQSAKVFEDMAEVEQQHRNVLIDMHRRRFGETI PLIRREHVRGFYERTPDWLVKNLSLEKIRAQAELMEAQAIRFYDEAVKRTTDASTRKLLGDLAEAERGHEDIAQMLEEKH LDEGGRTEEEETAKRQFLLTYVQPGLAGLMDGSVSTLAPIFAAAFATQDTWQTFLIGLSASVGAGISMGFTEAAHDDGKL SGRGSPLKRGLASGIMTAVGGLGHALPYLIPHFWTATAIAAIVVFVELWAIAFIQNRFMETPFLRAVFQVVLGGSLVLAA GIIIGNA
Sequences:
>Translated_327_residues MFRSLFSLSKRPFSSLGEQEILALAISSEEDDSRIYRSYADHLRAQYPQSAKVFEDMAEVEQQHRNVLIDMHRRRFGETI PLIRREHVRGFYERTPDWLVKNLSLEKIRAQAELMEAQAIRFYDEAVKRTTDASTRKLLGDLAEAERGHEDIAQMLEEKH LDEGGRTEEEETAKRQFLLTYVQPGLAGLMDGSVSTLAPIFAAAFATQDTWQTFLIGLSASVGAGISMGFTEAAHDDGKL SGRGSPLKRGLASGIMTAVGGLGHALPYLIPHFWTATAIAAIVVFVELWAIAFIQNRFMETPFLRAVFQVVLGGSLVLAA GIIIGNA >Mature_327_residues MFRSLFSLSKRPFSSLGEQEILALAISSEEDDSRIYRSYADHLRAQYPQSAKVFEDMAEVEQQHRNVLIDMHRRRFGETI PLIRREHVRGFYERTPDWLVKNLSLEKIRAQAELMEAQAIRFYDEAVKRTTDASTRKLLGDLAEAERGHEDIAQMLEEKH LDEGGRTEEEETAKRQFLLTYVQPGLAGLMDGSVSTLAPIFAAAFATQDTWQTFLIGLSASVGAGISMGFTEAAHDDGKL SGRGSPLKRGLASGIMTAVGGLGHALPYLIPHFWTATAIAAIVVFVELWAIAFIQNRFMETPFLRAVFQVVLGGSLVLAA GIIIGNA
Specific function: Unknown
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36259; Mature: 36259
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRSLFSLSKRPFSSLGEQEILALAISSEEDDSRIYRSYADHLRAQYPQSAKVFEDMAEV CCHHHHHHHCCCHHHCCHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EQQHRNVLIDMHRRRFGETIPLIRREHVRGFYERTPDWLVKNLSLEKIRAQAELMEAQAI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHH RFYDEAVKRTTDASTRKLLGDLAEAERGHEDIAQMLEEKHLDEGGRTEEEETAKRQFLLT HHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH YVQPGLAGLMDGSVSTLAPIFAAAFATQDTWQTFLIGLSASVGAGISMGFTEAAHDDGKL HHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC SGRGSPLKRGLASGIMTAVGGLGHALPYLIPHFWTATAIAAIVVFVELWAIAFIQNRFME CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPFLRAVFQVVLGGSLVLAAGIIIGNA CHHHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MFRSLFSLSKRPFSSLGEQEILALAISSEEDDSRIYRSYADHLRAQYPQSAKVFEDMAEV CCHHHHHHHCCCHHHCCHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EQQHRNVLIDMHRRRFGETIPLIRREHVRGFYERTPDWLVKNLSLEKIRAQAELMEAQAI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHH RFYDEAVKRTTDASTRKLLGDLAEAERGHEDIAQMLEEKHLDEGGRTEEEETAKRQFLLT HHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH YVQPGLAGLMDGSVSTLAPIFAAAFATQDTWQTFLIGLSASVGAGISMGFTEAAHDDGKL HHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC SGRGSPLKRGLASGIMTAVGGLGHALPYLIPHFWTATAIAAIVVFVELWAIAFIQNRFME CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPFLRAVFQVVLGGSLVLAAGIIIGNA CHHHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA