Click here to switch to the map view.

The map label for this gene is ywcH [H]

Identifier: 57652583

GI number: 57652583

Start: 401051

End: 402052

Strand: Direct

Name: ywcH [H]

Synonym: SACOL0394

Alternate gene names: 57652583

Gene position: 401051-402052 (Clockwise)

Preceding gene: 57652582

Following gene: 57652584

Centisome position: 14.28

GC content: 37.43

Gene sequence:

>1002_bases
TTGGTTAAATTAAGCGTATTAGACTATGCCTTAATAGATGAAGGTAAGGATGCACAAAAGGCATTGCAAGATTCAGTGAC
ACTTGCAAAATTAGCAGATCGACTTGGCTTTAAGCGAATTTGGTTTACGGAACATCATAATGTACCAGCGTTTGCGTGTA
GTAGTCCAGAACTTTTGATGATGCATACATTGGCGCAGACAAATCACATACGAGTTGGCTCTGGTGGTGTGATGCTGCCG
CACTATCGACCTTATAAAATTGCTGAGCATTTTAGAATGATGGCAGCGTTATATCCAAATCGTATTGATTTAGGTATTGG
TAATAATCCAGGTACTACTATGGTAAAGCAAGCTTTAGATGGAATAAATCCTACATATGATAGTTACGATGAATCGATTT
CGTTATTACGTGATTATCTTACAATAAAGGATAAACCAAGTGCGCATACGTTAGGTGTCCAACCACACATTGATCATTTT
CCAGAAATGTGGTTATTAAGTAGTAGCGCAACATCTGCCAAAATAGCTGCCGAACTAGGTATAGGGCTTTCTGTTGGAAC
ATTTTTGCTACCAGATATAAATGCGATACATGCAGCGAAGGATAACATTGATATTTACAAAAAACATTTCCAAGCATCAA
CGATTAAAATGGACGCAAAGGTGATGGCATCTGTATTTGTCATTGTAGCTGATAACGAAGCGGAAGTAGCAGCATTACAA
CATGCCTTAGATGTTTGGTTATTAGGTAAATTACAATTTGCAGAATTTGAAGATTTTCCTTCAGTAGACACAGCACAAAA
GTATAAGCTTAATGATCGAGACAAAGAGATGATTCAAGCACATCAAGCACGCATCATTGCAGGTACACAAGAAAAGGTTA
AAGCACAATTAGATGATTTCATTGCTACGTTTGAAGTTGATGAGGTGTTAGTAGCACCGCTTATTCCAGGTATTGAACAG
CGTTGTAAAACATTAAAATTACTCGCGGAAATTTATTTGTAG

Upstream 100 bases:

>100_bases
AACGTTATCATATACGTGGGTATATGAAGAGGGAATGGTATTAAGAACGCTAAAATGTTATGTCGGTTTGACATGACAGG
ATAAGTTTGGAGATGACGGA

Downstream 100 bases:

>100_bases
CATTTTAAATAGAAGAGAAAGGATGAAGATAAGATGAAAAAGTTAGCCAATTATTTATGGGTAGAAAAAGTAGGAGATTT
GTATGTGTTTAGTATGACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MVKLSVLDYALIDEGKDAQKALQDSVTLAKLADRLGFKRIWFTEHHNVPAFACSSPELLMMHTLAQTNHIRVGSGGVMLP
HYRPYKIAEHFRMMAALYPNRIDLGIGNNPGTTMVKQALDGINPTYDSYDESISLLRDYLTIKDKPSAHTLGVQPHIDHF
PEMWLLSSSATSAKIAAELGIGLSVGTFLLPDINAIHAAKDNIDIYKKHFQASTIKMDAKVMASVFVIVADNEAEVAALQ
HALDVWLLGKLQFAEFEDFPSVDTAQKYKLNDRDKEMIQAHQARIIAGTQEKVKAQLDDFIATFEVDEVLVAPLIPGIEQ
RCKTLKLLAEIYL

Sequences:

>Translated_333_residues
MVKLSVLDYALIDEGKDAQKALQDSVTLAKLADRLGFKRIWFTEHHNVPAFACSSPELLMMHTLAQTNHIRVGSGGVMLP
HYRPYKIAEHFRMMAALYPNRIDLGIGNNPGTTMVKQALDGINPTYDSYDESISLLRDYLTIKDKPSAHTLGVQPHIDHF
PEMWLLSSSATSAKIAAELGIGLSVGTFLLPDINAIHAAKDNIDIYKKHFQASTIKMDAKVMASVFVIVADNEAEVAALQ
HALDVWLLGKLQFAEFEDFPSVDTAQKYKLNDRDKEMIQAHQARIIAGTQEKVKAQLDDFIATFEVDEVLVAPLIPGIEQ
RCKTLKLLAEIYL
>Mature_333_residues
MVKLSVLDYALIDEGKDAQKALQDSVTLAKLADRLGFKRIWFTEHHNVPAFACSSPELLMMHTLAQTNHIRVGSGGVMLP
HYRPYKIAEHFRMMAALYPNRIDLGIGNNPGTTMVKQALDGINPTYDSYDESISLLRDYLTIKDKPSAHTLGVQPHIDHF
PEMWLLSSSATSAKIAAELGIGLSVGTFLLPDINAIHAAKDNIDIYKKHFQASTIKMDAKVMASVFVIVADNEAEVAALQ
HALDVWLLGKLQFAEFEDFPSVDTAQKYKLNDRDKEMIQAHQARIIAGTQEKVKAQLDDFIATFEVDEVLVAPLIPGIEQ
RCKTLKLLAEIYL

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=337, Percent_Identity=29.080118694362, Blast_Score=146, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 37070; Mature: 37070

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLSVLDYALIDEGKDAQKALQDSVTLAKLADRLGFKRIWFTEHHNVPAFACSSPELLM
CEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEECCCCCHHH
MHTLAQTNHIRVGSGGVMLPHYRPYKIAEHFRMMAALYPNRIDLGIGNNPGTTMVKQALD
HHHHHCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHH
GINPTYDSYDESISLLRDYLTIKDKPSAHTLGVQPHIDHFPEMWLLSSSATSAKIAAELG
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCHHCCCHHEEECCCCCCHHHHHHHC
IGLSVGTFLLPDINAIHAAKDNIDIYKKHFQASTIKMDAKVMASVFVIVADNEAEVAALQ
CCCCHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHEEHHHHEEEEEEEEEECCCHHHHHHH
HALDVWLLGKLQFAEFEDFPSVDTAQKYKLNDRDKEMIQAHQARIIAGTQEKVKAQLDDF
HHHHHHHCCCEECCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHH
IATFEVDEVLVAPLIPGIEQRCKTLKLLAEIYL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVKLSVLDYALIDEGKDAQKALQDSVTLAKLADRLGFKRIWFTEHHNVPAFACSSPELLM
CEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEECCCCCHHH
MHTLAQTNHIRVGSGGVMLPHYRPYKIAEHFRMMAALYPNRIDLGIGNNPGTTMVKQALD
HHHHHCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHH
GINPTYDSYDESISLLRDYLTIKDKPSAHTLGVQPHIDHFPEMWLLSSSATSAKIAAELG
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCHHCCCHHEEECCCCCCHHHHHHHC
IGLSVGTFLLPDINAIHAAKDNIDIYKKHFQASTIKMDAKVMASVFVIVADNEAEVAALQ
CCCCHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHEEHHHHEEEEEEEEEECCCHHHHHHH
HALDVWLLGKLQFAEFEDFPSVDTAQKYKLNDRDKEMIQAHQARIIAGTQEKVKAQLDDF
HHHHHHHCCCEECCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHH
IATFEVDEVLVAPLIPGIEQRCKTLKLLAEIYL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]