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The map label for this gene is 57652289

Identifier: 57652289

GI number: 57652289

Start: 2629393

End: 2629878

Strand: Direct

Name: 57652289

Synonym: SACOL2567

Alternate gene names: NA

Gene position: 2629393-2629878 (Clockwise)

Preceding gene: 57651059

Following gene: 57652293

Centisome position: 93.59

GC content: 30.25

Gene sequence:

>486_bases
TTGTTAGAACAGCAATTATTCCAAACGATTACTGTCAATCAAATTTGCGACAACGCACTCGTACACCGTACAACATTTTA
TAAACATTTTTATGATAAATATGATCTTCTAGAGTACTTGTTCAATCAATTGACTAAAGACTACTTTGCTAGAGATATCA
GTGACCGTCTTAATCATCCATTCCAAACGATGAGTGATACGATTAATAATAAAGAGGATTTGAGAGAAATCGCAGAATTC
CAAGAAGAAGACGCTGAATTTAATAAAGTATTAAAAAATGTCTGCATTAAAATTATGCATAACGATATCAAAAATAATAG
AGACCGTATCGATATTGACAGCGACATCCCAGATAATCTCATATTTTATATTTATGACTCGTTGATTGAAGGTTTTATAC
ATTGGATAAAAGATGAAAAAATTGATTGGCCTGGCGAAGATATTGATAACATTTTCCATAGATTAATCAATATTAAGATT
AAATAG

Upstream 100 bases:

>100_bases
TTTTGTATATTAAACTACACACAAAGGAGAAATGTAGATTAAAGAGACTGATTTACGAGTTATAAAGACAAAAAAAGCAT
TGTCGAGTAGCTTGCTACAA

Downstream 100 bases:

>100_bases
TAGATGAGAAACTCATGAGCGTTACCAACATTCATAATAAAAACGATAGTGTACACGTTAATGAATTCGTGTACTACTAT
CGTTTTTTATTTTTATCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: TetR Family Regulatory Protein; Transcriptional Regulator TetR-Family; Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEYLFNQLTKDYFARDISDRLNHPFQTMSDTINNKEDLREIAEF
QEEDAEFNKVLKNVCIKIMHNDIKNNRDRIDIDSDIPDNLIFYIYDSLIEGFIHWIKDEKIDWPGEDIDNIFHRLINIKI
K

Sequences:

>Translated_161_residues
MLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEYLFNQLTKDYFARDISDRLNHPFQTMSDTINNKEDLREIAEF
QEEDAEFNKVLKNVCIKIMHNDIKNNRDRIDIDSDIPDNLIFYIYDSLIEGFIHWIKDEKIDWPGEDIDNIFHRLINIKI
K
>Mature_161_residues
MLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEYLFNQLTKDYFARDISDRLNHPFQTMSDTINNKEDLREIAEF
QEEDAEFNKVLKNVCIKIMHNDIKNNRDRIDIDSDIPDNLIFYIYDSLIEGFIHWIKDEKIDWPGEDIDNIFHRLINIKI
K

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19525; Mature: 19525

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEYLFNQLTKDYFARDISDRLNHP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FQTMSDTINNKEDLREIAEFQEEDAEFNKVLKNVCIKIMHNDIKNNRDRIDIDSDIPDNL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
IFYIYDSLIEGFIHWIKDEKIDWPGEDIDNIFHRLINIKIK
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEYLFNQLTKDYFARDISDRLNHP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FQTMSDTINNKEDLREIAEFQEEDAEFNKVLKNVCIKIMHNDIKNNRDRIDIDSDIPDNL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
IFYIYDSLIEGFIHWIKDEKIDWPGEDIDNIFHRLINIKIK
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA