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The map label for this gene is lytR [H]

Identifier: 57652242

GI number: 57652242

Start: 2364682

End: 2365635

Strand: Reverse

Name: lytR [H]

Synonym: SACOL2302

Alternate gene names: 57652242

Gene position: 2365635-2364682 (Counterclockwise)

Preceding gene: 57652243

Following gene: 57652241

Centisome position: 84.2

GC content: 35.43

Gene sequence:

>954_bases
GTGGGATTGAAACGTTCGTCTAAAAGTAAAATGAGCCTACCGAAAAAAATATTTTTATGGGTATTCGGTATTTTAGTAAT
CTTAGCGATTGTAGCTGTTGTGTATGTAGCTGCTAAAATTTTTATTACTGGTAATAAGATACACAATCCGTTAGATCGCA
ATCATTCAGAATTAAGAGATAAAAAAGTGAGTTTAAACGATGGTGATCCATTCACAATCGCTTTATTTGGTGTCGATTCA
GATGCTGATCGTAAGAAAAAGGGTGGCGGAGAGCGTAGTGATAGTATTATGATTTTATCTATCAACCCTAAAACGAAGAA
AACTGAAATAGTAAGTATACCGCGTGATACAAGAGCGGAAATTGTTGGCCGTGGTACTACTGAAAAAATTGCACATGCCT
ATGCATATGGTGGACCAAATATGGCTGTTAAATCACTTGAAAAATTAATGAATGTGCCAATTGATCATTATGCGACAATC
GATATGGATGGTTTGCATAATATGATAGATAGCATCGGCGGTGTTGATGTAGTAAGTAATGATACATTCACTGTTGATGG
TGTTCGTTTTACAAAAGGACAGCAGACACATGTAAATGGTGATCAAGCATTGAAGTTTATTAGAAGTCGTAAAGAAGAAG
GTGCTGGTGGTGACTTTGGTCGACAACAACGTCAGCAAATTGTGCTTGAAGCGATGGCCAATAAGATTGCAAGCCCATCA
TCGATTACACATTTTAATAGTCTAATGAATGAAATTCAAAATAATGTTAAAACAGATTTAACATTAGGTGATTTGAATAC
GATTAGAAGCAATTATAAAGATGCTAATGACACGATTAATAAACATCAATTGAGTGGTCAAGGCGGCATTCAAAGTGACG
GATTGTACTACTTCATTCCTAGTGAGCAGTCAAAAGCTGAAAGTACTAAGTTATTAAAAGATAATCTAGAGTAG

Upstream 100 bases:

>100_bases
AAAAATAGTTATACGTCTACAGAAGTATAGTAAAAAAATTATTTTACTATATAATAAATAGAGAAAACAGACAAAGTATG
TAAGGAATAGTAAAGGAGTG

Downstream 100 bases:

>100_bases
TAAACTAAGGGAAAATAAGTTATCAAAATTGTACACAAATTAATTAGATAGAATGATCTGTAAATAGAATAACGAATAGA
ACTAATAGCCCGTAAATAGA

Product: transcriptional regulator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MGLKRSSKSKMSLPKKIFLWVFGILVILAIVAVVYVAAKIFITGNKIHNPLDRNHSELRDKKVSLNDGDPFTIALFGVDS
DADRKKKGGGERSDSIMILSINPKTKKTEIVSIPRDTRAEIVGRGTTEKIAHAYAYGGPNMAVKSLEKLMNVPIDHYATI
DMDGLHNMIDSIGGVDVVSNDTFTVDGVRFTKGQQTHVNGDQALKFIRSRKEEGAGGDFGRQQRQQIVLEAMANKIASPS
SITHFNSLMNEIQNNVKTDLTLGDLNTIRSNYKDANDTINKHQLSGQGGIQSDGLYYFIPSEQSKAESTKLLKDNLE

Sequences:

>Translated_317_residues
MGLKRSSKSKMSLPKKIFLWVFGILVILAIVAVVYVAAKIFITGNKIHNPLDRNHSELRDKKVSLNDGDPFTIALFGVDS
DADRKKKGGGERSDSIMILSINPKTKKTEIVSIPRDTRAEIVGRGTTEKIAHAYAYGGPNMAVKSLEKLMNVPIDHYATI
DMDGLHNMIDSIGGVDVVSNDTFTVDGVRFTKGQQTHVNGDQALKFIRSRKEEGAGGDFGRQQRQQIVLEAMANKIASPS
SITHFNSLMNEIQNNVKTDLTLGDLNTIRSNYKDANDTINKHQLSGQGGIQSDGLYYFIPSEQSKAESTKLLKDNLE
>Mature_316_residues
GLKRSSKSKMSLPKKIFLWVFGILVILAIVAVVYVAAKIFITGNKIHNPLDRNHSELRDKKVSLNDGDPFTIALFGVDSD
ADRKKKGGGERSDSIMILSINPKTKKTEIVSIPRDTRAEIVGRGTTEKIAHAYAYGGPNMAVKSLEKLMNVPIDHYATID
MDGLHNMIDSIGGVDVVSNDTFTVDGVRFTKGQQTHVNGDQALKFIRSRKEEGAGGDFGRQQRQQIVLEAMANKIASPSS
ITHFNSLMNEIQNNVKTDLTLGDLNTIRSNYKDANDTINKHQLSGQGGIQSDGLYYFIPSEQSKAESTKLLKDNLE

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 34908; Mature: 34777

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLKRSSKSKMSLPKKIFLWVFGILVILAIVAVVYVAAKIFITGNKIHNPLDRNHSELRD
CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHCCCCCCCHHHHHH
KKVSLNDGDPFTIALFGVDSDADRKKKGGGERSDSIMILSINPKTKKTEIVSIPRDTRAE
CCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCEEEEEECCCCCCEEEEECCCCCHHH
IVGRGTTEKIAHAYAYGGPNMAVKSLEKLMNVPIDHYATIDMDGLHNMIDSIGGVDVVSN
HHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHCCCCEEECC
DTFTVDGVRFTKGQQTHVNGDQALKFIRSRKEEGAGGDFGRQQRQQIVLEAMANKIASPS
CEEEECCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
SITHFNSLMNEIQNNVKTDLTLGDLNTIRSNYKDANDTINKHQLSGQGGIQSDGLYYFIP
HHHHHHHHHHHHHHHHHCCEEECHHHHHHHHCCCCHHCCHHHCCCCCCCCCCCCEEEEEC
SEQSKAESTKLLKDNLE
CCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
GLKRSSKSKMSLPKKIFLWVFGILVILAIVAVVYVAAKIFITGNKIHNPLDRNHSELRD
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHCCCCCCCHHHHHH
KKVSLNDGDPFTIALFGVDSDADRKKKGGGERSDSIMILSINPKTKKTEIVSIPRDTRAE
CCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCEEEEEECCCCCCEEEEECCCCCHHH
IVGRGTTEKIAHAYAYGGPNMAVKSLEKLMNVPIDHYATIDMDGLHNMIDSIGGVDVVSN
HHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHCCCCEEECC
DTFTVDGVRFTKGQQTHVNGDQALKFIRSRKEEGAGGDFGRQQRQQIVLEAMANKIASPS
CEEEECCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
SITHFNSLMNEIQNNVKTDLTLGDLNTIRSNYKDANDTINKHQLSGQGGIQSDGLYYFIP
HHHHHHHHHHHHHHHHHCCEEECHHHHHHHHCCCCHHCCHHHCCCCCCCCCCCCEEEEEC
SEQSKAESTKLLKDNLE
CCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA