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The map label for this gene is atpF

Identifier: 57652129

GI number: 57652129

Start: 2161539

End: 2162060

Strand: Reverse

Name: atpF

Synonym: SACOL2099

Alternate gene names: 57652129

Gene position: 2162060-2161539 (Counterclockwise)

Preceding gene: 57652130

Following gene: 57652128

Centisome position: 76.96

GC content: 36.02

Gene sequence:

>522_bases
GTGACTGAAACAGCTAACTTATTCGTTCTTGGTGCAGCTGGAGGCGTTGAGTGGGGTACTGTGATTGTACAGGTCCTAAC
TTTCATCGTGTTACTTGCGTTACTTAAAAAGTTCGCATGGGGTCCATTGAAAGATGTAATGGATAAACGTGAAAGAGATA
TTAACAGAGATATCGATGACGCAGAACAAGCTAAGTTAAATGCACAGAAACTTGAAGAAGAAAATAAACAAAAACTTAAA
GAAACACAAGAAGAAGTTCAAAAGATTTTAGAAGATGCTAAGGTTCAAGCACGTCAACAGCAAGAACAAATTATTCATGA
AGCAAACGTACGTGCAAACGGTATGATTGAAACAGCACAAAGTGAAATCAATAGCCAAAAAGAACGTGCCATTGCAGATA
TTAATAATCAAGTATCTGAACTATCAGTGTTAATTGCTTCTAAAGTTCTTAGAAAAGAAATTTCTGAACAAGACCAAAAA
GCATTGGTTGACAAGTATCTAAAAGAGGCAGGCGATAAATAA

Upstream 100 bases:

>100_bases
ACGCACCATGCCTATCGCATAAATTCAGTAGGTCCTAACCTCGTCGTTTTTTTCTATATAACACTAGCGATTATTTTAAT
GAAAGGAGTGTCATGAACCC

Downstream 100 bases:

>100_bases
TGGTAAAAGTAGCTAACAAGTATGCTAAAGCATTATTTGACGTGTCATTAGATACAAATAATTTAGAGACTATTAATGAA
GAATTAACAGTTATAAATGA

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTETANLFVLGAAGGVEWGTVIVQVLTFIVLLALLKKFAWGPLKDVMDKRERDINRDIDDAEQAKLNAQKLEEENKQKLK
ETQEEVQKILEDAKVQARQQQEQIIHEANVRANGMIETAQSEINSQKERAIADINNQVSELSVLIASKVLRKEISEQDQK
ALVDKYLKEAGDK

Sequences:

>Translated_173_residues
MTETANLFVLGAAGGVEWGTVIVQVLTFIVLLALLKKFAWGPLKDVMDKRERDINRDIDDAEQAKLNAQKLEEENKQKLK
ETQEEVQKILEDAKVQARQQQEQIIHEANVRANGMIETAQSEINSQKERAIADINNQVSELSVLIASKVLRKEISEQDQK
ALVDKYLKEAGDK
>Mature_172_residues
TETANLFVLGAAGGVEWGTVIVQVLTFIVLLALLKKFAWGPLKDVMDKRERDINRDIDDAEQAKLNAQKLEEENKQKLKE
TQEEVQKILEDAKVQARQQQEQIIHEANVRANGMIETAQSEINSQKERAIADINNQVSELSVLIASKVLRKEISEQDQKA
LVDKYLKEAGDK

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=155, Percent_Identity=27.741935483871, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_STAA1 (A7X4U9)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442681.1
- STRING:   A7X4U9
- EnsemblBacteria:   EBSTAT00000002894
- GeneID:   5561462
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_2091
- eggNOG:   COG0711
- GeneTree:   EBGT00050000024433
- HOGENOM:   HBG617328
- OMA:   NPGLIFW
- ProtClustDB:   PRK13453
- BioCyc:   SAUR418127:SAHV_2091-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19540; Mature: 19408

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xfca3540)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETANLFVLGAAGGVEWGTVIVQVLTFIVLLALLKKFAWGPLKDVMDKRERDINRDIDD
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH
AEQAKLNAQKLEEENKQKLKETQEEVQKILEDAKVQARQQQEQIIHEANVRANGMIETAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SEINSQKERAIADINNQVSELSVLIASKVLRKEISEQDQKALVDKYLKEAGDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure 
TETANLFVLGAAGGVEWGTVIVQVLTFIVLLALLKKFAWGPLKDVMDKRERDINRDIDD
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH
AEQAKLNAQKLEEENKQKLKETQEEVQKILEDAKVQARQQQEQIIHEANVRANGMIETAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SEINSQKERAIADINNQVSELSVLIASKVLRKEISEQDQKALVDKYLKEAGDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA