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The map label for this gene is ymaD [H]

Identifier: 57652020

GI number: 57652020

Start: 1810177

End: 1810623

Strand: Direct

Name: ymaD [H]

Synonym: SACOL1771

Alternate gene names: 57652020

Gene position: 1810177-1810623 (Clockwise)

Preceding gene: 57652018

Following gene: 57652021

Centisome position: 64.43

GC content: 34.9

Gene sequence:

>447_bases
TTGCATCAACATGACTTTAAAGTCCAAACTTCTTGGCAAGGTGGTCGTAACAATGTCGGAAACGTTCAAGGCGACATACT
TTCAGAGAATATTTCTATACCTGCTTCTTTAGGTGGTGTTGGTATAGGAACAAATCCCGATGAAATGTTAGTATCAGCCG
CTTCATCATGTTATATCATCTCATTAGCAGCTACTCTTGAACGTGCAAAGTTCACAGATATTTCAATTGAACAACAATCG
ATTGGAACAGCTTGTTTAAATAACGGAAAATTCAGTATGTCAAAAATTGTGCACCATCCTCAAATTCAAATTCCAAGTGA
TCAAATAGCACAATTAGAAAAGCGATTACCAAAATTGATAACAATTGCAGATAATAATTGCATGATTTCAAATGCTGTAA
GAAATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAA

Upstream 100 bases:

>100_bases
TTTCAGTTTATTCAGAGTCATTGATAAGTCACCTTTCTGTTAAACTTTGATAAACTATTCTAAAATTAAACTATCACAAT
TATATTGGAGGTTAAAGCAA

Downstream 100 bases:

>100_bases
AATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGATAA
AATAGTGAAATCTTATTTAT

Product: OsmC/Ohr family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MHQHDFKVQTSWQGGRNNVGNVQGDILSENISIPASLGGVGIGTNPDEMLVSAASSCYIISLAATLERAKFTDISIEQQS
IGTACLNNGKFSMSKIVHHPQIQIPSDQIAQLEKRLPKLITIADNNCMISNAVRNNVDIKIYPIIQAK

Sequences:

>Translated_148_residues
MHQHDFKVQTSWQGGRNNVGNVQGDILSENISIPASLGGVGIGTNPDEMLVSAASSCYIISLAATLERAKFTDISIEQQS
IGTACLNNGKFSMSKIVHHPQIQIPSDQIAQLEKRLPKLITIADNNCMISNAVRNNVDIKIYPIIQAK
>Mature_148_residues
MHQHDFKVQTSWQGGRNNVGNVQGDILSENISIPASLGGVGIGTNPDEMLVSAASSCYIISLAATLERAKFTDISIEQQS
IGTACLNNGKFSMSKIVHHPQIQIPSDQIAQLEKRLPKLITIADNNCMISNAVRNNVDIKIYPIIQAK

Specific function: Unknown

COG id: COG1764

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the osmC/ohr family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR019905
- InterPro:   IPR003718 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: NA

Molecular weight: Translated: 16071; Mature: 16071

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQHDFKVQTSWQGGRNNVGNVQGDILSENISIPASLGGVGIGTNPDEMLVSAASSCYII
CCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEE
SLAATLERAKFTDISIEQQSIGTACLNNGKFSMSKIVHHPQIQIPSDQIAQLEKRLPKLI
EEEHHHHHCCCCCCEECHHHCCHHHHCCCCCCHHHHCCCCCEECCHHHHHHHHHCCCEEE
TIADNNCMISNAVRNNVDIKIYPIIQAK
EEECCCEEEECHHCCCCCEEEEEEEECC
>Mature Secondary Structure
MHQHDFKVQTSWQGGRNNVGNVQGDILSENISIPASLGGVGIGTNPDEMLVSAASSCYII
CCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEE
SLAATLERAKFTDISIEQQSIGTACLNNGKFSMSKIVHHPQIQIPSDQIAQLEKRLPKLI
EEEHHHHHCCCCCCEECHHHCCHHHHCCCCCCHHHHCCCCCEECCHHHHHHHHHCCCEEE
TIADNNCMISNAVRNNVDIKIYPIIQAK
EEECCCEEEECHHCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]