Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is ytsP [H]
Identifier: 57652017
GI number: 57652017
Start: 1807828
End: 1808292
Strand: Direct
Name: ytsP [H]
Synonym: SACOL1768
Alternate gene names: 57652017
Gene position: 1807828-1808292 (Clockwise)
Preceding gene: 57652015
Following gene: 57652018
Centisome position: 64.35
GC content: 35.48
Gene sequence:
>465_bases ATGACAACAATTAACCCAACAAACTACACATTATTAAAGAAACAAGCAGCAAGCCTTATTGAAGATGAACATCACATGAT TGCTATTTTAAGTAACATGTCTGCCTTATTAAATGATAATCTAGATCAAATTAATTGGGTTGGCTTTTACTTATTGGAAC AAAATGAACTTATACTTGGACCTTTCCAAGGACACCCCGCTTGTGTCCACATTCCAATTGGAAAAGGTGTATGTGGTACA GCCGTTTCAGAACGTCGTACACAAATTGTAGCTGATGTTCATCAATTCGAAGGACATATCGCTTGTGATGCTAATAGTAA GTCTGAGATTGTCGTTCCAATTTTCAAAGATGATAAAATTATCGGCGTCTTAGATATCGATGCCCCTATAACGGATCGAT TTGATGACAATGACAAAGAACATCTTGAAGCAATTGTTAAAATTATTGAAAAGCAACTCGCATAA
Upstream 100 bases:
>100_bases GTAATTTTGCTTAAGGATAAATTATAAAATGAATTTATTGCCATAATATTTTCGAAATTCTATACTATTATAAAATCTAT GAAAATAAGAGGTTTTAAAT
Downstream 100 bases:
>100_bases AAGGACATCAGCATTTTCAATAAAGTGTTGACAGTTAGCAGGAAAATGTTACAATAATCTTTGTGTGAATTAACGAAAGT AGCAGTTGTATATTATTGAG
Product: GAF domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTTINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGT AVSERRTQIVADVHQFEGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA
Sequences:
>Translated_154_residues MTTINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGT AVSERRTQIVADVHQFEGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA >Mature_153_residues TTINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTA VSERRTQIVADVHQFEGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA
Specific function: Unknown
COG id: COG1956
COG function: function code T; GAF domain-containing protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the free Met sulfoxide reductase family [H]
Homologues:
Organism=Escherichia coli, GI171474009, Length=146, Percent_Identity=52.7397260273973, Blast_Score=162, Evalue=7e-42, Organism=Saccharomyces cerevisiae, GI6322781, Length=143, Percent_Identity=49.6503496503497, Blast_Score=128, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR000614 [H]
Pfam domain/function: PF01590 GAF [H]
EC number: NA
Molecular weight: Translated: 17111; Mature: 16980
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS01320 UPF0067
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILG CCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEE PFQGHPACVHIPIGKGVCGTAVSERRTQIVADVHQFEGHIACDANSKSEIVVPIFKDDKI CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCE IGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TTINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILG CCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEE PFQGHPACVHIPIGKGVCGTAVSERRTQIVADVHQFEGHIACDANSKSEIVVPIFKDDKI CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCE IGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]