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The map label for this gene is sodA2

Identifier: 57651946

GI number: 57651946

Start: 1641100

End: 1641699

Strand: Reverse

Name: sodA2

Synonym: SACOL1610

Alternate gene names: 57651946

Gene position: 1641699-1641100 (Counterclockwise)

Preceding gene: 57651947

Following gene: 57651945

Centisome position: 58.44

GC content: 35.0

Gene sequence:

>600_bases
ATGGCTTTTGAATTACCAAAATTACCATACGCATTTGATGCATTAGAACCACATTTTGACAAAGAAACTATGGAAATTCA
CCATGACAGACATCATAACACGTATGTTACGAAATTAAATGCTGCAGTAGAAGGTACAGATTTAGAATCTAAATCTATTG
AAGAAATTGTTGCTAATTTAGACAGTGTACCAGCTAACATCCAAACTGCTGTACGTAATAATGGCGGTGGACATTTAAAC
CATTCATTATTCTGGGAGTTACTTTCACCAAACTCAGAAGAAAAAGGTACTGTAGTAGAAAAAATTAAAGAACAATGGGG
TTCTTTAGAAGAATTTAAAAAAGAATTTGCTGACAAAGCAGCTGCACGCTTTGGTTCAGGTTGGGCTTGGTTAGTCGTAA
ACAATGGCCAGTTAGAAATTGTGACTACACCAAACCAAGATAATCCATTAACTGAGGGTAAAACACCTATTTTAGGTTTA
GACGTATGGGAACACGCTTATTACCTAAAATATCAAAACAAACGCCCTGACTACATTGGCGCATTTTGGAATGTAGTTAA
CTGGGAAAAAGTTGACGAATTATATAATGCAACAAAATAA

Upstream 100 bases:

>100_bases
TAGAGAAAATAATAAGTAGTAGAATTTAAGCAAATTCTTTGTTGAACCAGTCACTGCTTGTTATTATTTACTTACAGACA
TTTTAGGAGGATGATTATTT

Downstream 100 bases:

>100_bases
AGTATGATTACTTGTTCGGTCTCTTAAATGAGACCGTTATTTTTTTGTCAAAAAGATAGAAATAATTTCTAAATTCATAT
ATGATTTAAAGTGAAAGACT

Product: superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MAFELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLN
HSLFWELLSPNSEEKGTVVEKIKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNGQLEIVTTPNQDNPLTEGKTPILGL
DVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELYNATK

Sequences:

>Translated_199_residues
MAFELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLN
HSLFWELLSPNSEEKGTVVEKIKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNGQLEIVTTPNQDNPLTEGKTPILGL
DVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELYNATK
>Mature_198_residues
AFELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNH
SLFWELLSPNSEEKGTVVEKIKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNGQLEIVTTPNQDNPLTEGKTPILGLD
VWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELYNATK

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family

Homologues:

Organism=Homo sapiens, GI67782307, Length=202, Percent_Identity=47.5247524752475, Blast_Score=187, Evalue=4e-48,
Organism=Homo sapiens, GI67782305, Length=202, Percent_Identity=47.5247524752475, Blast_Score=187, Evalue=4e-48,
Organism=Homo sapiens, GI67782309, Length=199, Percent_Identity=39.6984924623116, Blast_Score=141, Evalue=3e-34,
Organism=Escherichia coli, GI1790342, Length=206, Percent_Identity=53.3980582524272, Blast_Score=234, Evalue=4e-63,
Organism=Escherichia coli, GI1787946, Length=194, Percent_Identity=49.4845360824742, Blast_Score=192, Evalue=9e-51,
Organism=Caenorhabditis elegans, GI17569479, Length=195, Percent_Identity=43.0769230769231, Blast_Score=155, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17506561, Length=197, Percent_Identity=41.1167512690355, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6321796, Length=209, Percent_Identity=41.6267942583732, Blast_Score=153, Evalue=2e-38,
Organism=Drosophila melanogaster, GI17136812, Length=200, Percent_Identity=47, Blast_Score=181, Evalue=2e-46,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): SODM1_STAA3 (Q2FGH0)

Other databases:

- EMBL:   CP000255
- RefSeq:   YP_494208.1
- HSSP:   Q9RUV2
- ProteinModelPortal:   Q2FGH0
- SMR:   Q2FGH0
- STRING:   Q2FGH0
- EnsemblBacteria:   EBSTAT00000038500
- GeneID:   3915273
- GenomeReviews:   CP000255_GR
- KEGG:   saa:SAUSA300_1513
- eggNOG:   COG0605
- GeneTree:   EBGT00050000024279
- HOGENOM:   HBG507761
- OMA:   QTSPRTE
- ProtClustDB:   CLSK884424
- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831
- PANTHER:   PTHR11404
- PIRSF:   PIRSF000349
- PRINTS:   PR01703

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N; SSF46609 SODismutase; SSF54719 SODismutase

EC number: =1.15.1.1

Molecular weight: Translated: 22711; Mature: 22580

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANL
CCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCEEEEEEECEECCCCCCHHHHHHHHHHH
DSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEKIKEQWGSLEEFKKEFADKA
CCCCCHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
AARFGSGWAWLVVNNGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYIG
HHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEHHHHHEEEEEECCCCCCHHH
AFWNVVNWEKVDELYNATK
HHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
AFELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANL
CCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCEEEEEEECEECCCCCCHHHHHHHHHHH
DSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEKIKEQWGSLEEFKKEFADKA
CCCCCHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
AARFGSGWAWLVVNNGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYIG
HHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEHHHHHEEEEEECCCCCCHHH
AFWNVVNWEKVDELYNATK
HHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA