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The map label for this gene is lytN [H]

Identifier: 57651816

GI number: 57651816

Start: 1272942

End: 1274093

Strand: Direct

Name: lytN [H]

Synonym: SACOL1264

Alternate gene names: 57651816

Gene position: 1272942-1274093 (Clockwise)

Preceding gene: 57651815

Following gene: 57651817

Centisome position: 45.31

GC content: 28.91

Gene sequence:

>1152_bases
ATGTTTTTATATTATTGTAAGGAGTGTTTCATCATGAATAAACAACAAAGTAAAGTACGCTATTCAATTAGAAAAGTTAG
TATTGGAATTTTGTCAATTTCAATAGGTATGTTTTTGGCATTGGGTATGTCGAACAAAGCATATGCAGATGAAATTGATA
AATCTAAAGATTTTACAAGAGGGTATGAGCAAAATGTATTCGCGAAATCAGAGTTAAATGCTAATAAAAATACGACAAAA
GACAAAATAAAAAATGAAGGTGCTGTTAAAACATCGGACACAAGTTTAAAGTTAGACAACAAATCAGCAATTTCAAACGG
AAATGAAATTAATCAAGATATAAAGATTTCAAATACTCCGAAAAACTCAAGCCAAGGTAACAATCTAGTTATTAATAACA
ATGAACTTACTAAAGAAATTAAAATTGCAAACTTGGAAGCTCAAAATTCTAATCAGAAGAAAACGAATAAAGTTACTAAT
AATTACTTTGGTTACTACAGTTTTAGAGAAGCTCCAAAAACACAAATCTATACTGTAAAAAAAGGAGACACACTTAGTGC
TATAGCATTAAAATACAAAACTACAGTTTCAAATATTCAAAATACAAATAATATAGCAAATCCTAATTTAATATTTATTG
GTCAAAAATTAAAAGTGCCAATGACACCATTAGTAGAACCAAAACCAAAAACAGTGTCTTCAAATAATAAAAGTAATAGT
AATAGCAGTACATTAAATTATTTGAAAACATTAGAGAATAGAGGATGGGATTTCGACGGTAGTTATGGATGGCAATGTTT
CGATTTAGTTAATGTATATTGGAATCATCTTTATGGTCATGGATTAAAAGGATATGGAGCTAAAGATATACCATATGCAA
ATAATTTTAATAGTGAAGCTAAAATTTATCACAACACACCAACTTTCAAAGCTGAACCTGGGGACTTAGTGGTTTTTAGT
GGAAGATTTGGTGGAGGATATGGTCATACAGCTATTGTCTTAAATGGTGATTATGATGGAAAATTAATGAAGTTCCAAAG
TTTAGATCAAAACTGGAATAATGGTGGATGGCGTAAAGCAGAGGTTGCACATAAAGTTGTTCATAATTATGAAAATGATA
TGATTTTTATTAGACCATTTAAAAAAGCATAA

Upstream 100 bases:

>100_bases
TTTTCATATTTTGGAAAGACAAGTTAATTATTTTACCTCCTACAATAGCTTTATAAAACAAAGAAAATTTTAATTAAAAT
ATATAGCGCACTATGTTATA

Downstream 100 bases:

>100_bases
TTTAAATCGAAGGCAGGACATTGAAATATGAAATTTTCAACTTTAAGTGAAGAAGAATTTACCAACTACACCAAAAAGCA
CTTCAAACATTATACACAGT

Product: cell wall hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MFLYYCKECFIMNKQQSKVRYSIRKVSIGILSISIGMFLALGMSNKAYADEIDKSKDFTRGYEQNVFAKSELNANKNTTK
DKIKNEGAVKTSDTSLKLDNKSAISNGNEINQDIKISNTPKNSSQGNNLVINNNELTKEIKIANLEAQNSNQKKTNKVTN
NYFGYYSFREAPKTQIYTVKKGDTLSAIALKYKTTVSNIQNTNNIANPNLIFIGQKLKVPMTPLVEPKPKTVSSNNKSNS
NSSTLNYLKTLENRGWDFDGSYGWQCFDLVNVYWNHLYGHGLKGYGAKDIPYANNFNSEAKIYHNTPTFKAEPGDLVVFS
GRFGGGYGHTAIVLNGDYDGKLMKFQSLDQNWNNGGWRKAEVAHKVVHNYENDMIFIRPFKKA

Sequences:

>Translated_383_residues
MFLYYCKECFIMNKQQSKVRYSIRKVSIGILSISIGMFLALGMSNKAYADEIDKSKDFTRGYEQNVFAKSELNANKNTTK
DKIKNEGAVKTSDTSLKLDNKSAISNGNEINQDIKISNTPKNSSQGNNLVINNNELTKEIKIANLEAQNSNQKKTNKVTN
NYFGYYSFREAPKTQIYTVKKGDTLSAIALKYKTTVSNIQNTNNIANPNLIFIGQKLKVPMTPLVEPKPKTVSSNNKSNS
NSSTLNYLKTLENRGWDFDGSYGWQCFDLVNVYWNHLYGHGLKGYGAKDIPYANNFNSEAKIYHNTPTFKAEPGDLVVFS
GRFGGGYGHTAIVLNGDYDGKLMKFQSLDQNWNNGGWRKAEVAHKVVHNYENDMIFIRPFKKA
>Mature_383_residues
MFLYYCKECFIMNKQQSKVRYSIRKVSIGILSISIGMFLALGMSNKAYADEIDKSKDFTRGYEQNVFAKSELNANKNTTK
DKIKNEGAVKTSDTSLKLDNKSAISNGNEINQDIKISNTPKNSSQGNNLVINNNELTKEIKIANLEAQNSNQKKTNKVTN
NYFGYYSFREAPKTQIYTVKKGDTLSAIALKYKTTVSNIQNTNNIANPNLIFIGQKLKVPMTPLVEPKPKTVSSNNKSNS
NSSTLNYLKTLENRGWDFDGSYGWQCFDLVNVYWNHLYGHGLKGYGAKDIPYANNFNSEAKIYHNTPTFKAEPGDLVVFS
GRFGGGYGHTAIVLNGDYDGKLMKFQSLDQNWNNGGWRKAEVAHKVVHNYENDMIFIRPFKKA

Specific function: Probably involved in peptidoglycan hydrolysis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 peptidase C51 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007921
- InterPro:   IPR005877
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF05257 CHAP; PF01476 LysM; PF04650 YSIRK_signal [H]

EC number: NA

Molecular weight: Translated: 43197; Mature: 43197

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50911 CHAP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLYYCKECFIMNKQQSKVRYSIRKVSIGILSISIGMFLALGMSNKAYADEIDKSKDFTR
CEEEEEEEEHEECCCHHHHHEEEEEEEEEEEEHHHHHHHEECCCCCHHHHHHHCCHHHHC
GYEQNVFAKSELNANKNTTKDKIKNEGAVKTSDTSLKLDNKSAISNGNEINQDIKISNTP
CHHHCCEEHHHCCCCCCCCHHHHCCCCCEEECCCEEEECCCHHCCCCCCCCCCEEECCCC
KNSSQGNNLVINNNELTKEIKIANLEAQNSNQKKTNKVTNNYFGYYSFREAPKTQIYTVK
CCCCCCCEEEEECCCCCEEEEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEEE
KGDTLSAIALKYKTTVSNIQNTNNIANPNLIFIGQKLKVPMTPLVEPKPKTVSSNNKSNS
CCCCEEEEEEEEHHHHHHCCCCCCCCCCCEEEEECEECCCCCCCCCCCCCCCCCCCCCCC
NSSTLNYLKTLENRGWDFDGSYGWQCFDLVNVYWNHLYGHGLKGYGAKDIPYANNFNSEA
CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
KIYHNTPTFKAEPGDLVVFSGRFGGGYGHTAIVLNGDYDGKLMKFQSLDQNWNNGGWRKA
EEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEHH
EVAHKVVHNYENDMIFIRPFKKA
HHHHHHHHCCCCCEEEEEECCCC
>Mature Secondary Structure
MFLYYCKECFIMNKQQSKVRYSIRKVSIGILSISIGMFLALGMSNKAYADEIDKSKDFTR
CEEEEEEEEHEECCCHHHHHEEEEEEEEEEEEHHHHHHHEECCCCCHHHHHHHCCHHHHC
GYEQNVFAKSELNANKNTTKDKIKNEGAVKTSDTSLKLDNKSAISNGNEINQDIKISNTP
CHHHCCEEHHHCCCCCCCCHHHHCCCCCEEECCCEEEECCCHHCCCCCCCCCCEEECCCC
KNSSQGNNLVINNNELTKEIKIANLEAQNSNQKKTNKVTNNYFGYYSFREAPKTQIYTVK
CCCCCCCEEEEECCCCCEEEEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEEE
KGDTLSAIALKYKTTVSNIQNTNNIANPNLIFIGQKLKVPMTPLVEPKPKTVSSNNKSNS
CCCCEEEEEEEEHHHHHHCCCCCCCCCCCEEEEECEECCCCCCCCCCCCCCCCCCCCCCC
NSSTLNYLKTLENRGWDFDGSYGWQCFDLVNVYWNHLYGHGLKGYGAKDIPYANNFNSEA
CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
KIYHNTPTFKAEPGDLVVFSGRFGGGYGHTAIVLNGDYDGKLMKFQSLDQNWNNGGWRKA
EEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEHH
EVAHKVVHNYENDMIFIRPFKKA
HHHHHHHHCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9931440; 10077832; 12791130 [H]